Danio rerio

36 known processes

si:ch211-159p3.1

si:ch211-159p3.1

si:ch211-159p3.1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
signal transduction GO:0007165 455 0.071
larval development GO:0002164 2 0.055
cell surface receptor signaling pathway GO:0007166 325 0.050
positive regulation of cellular component biogenesis GO:0044089 3 0.042
multicellular organism growth GO:0035264 4 0.038
cell projection organization GO:0030030 284 0.036
regulation of stem cell proliferation GO:0072091 2 0.035
maintenance of location GO:0051235 4 0.035
heterocycle metabolic process GO:0046483 290 0.035
regulation of synapse assembly GO:0051963 3 0.035
phagocytosis GO:0006909 3 0.032
cellular component movement GO:0006928 335 0.032
cellular protein catabolic process GO:0044257 4 0.031
stem cell proliferation GO:0072089 4 0.031
blood vessel development GO:0001568 246 0.030
aging GO:0007568 2 0.030
cell morphogenesis GO:0000902 289 0.029
regulation of cell communication GO:0010646 232 0.029
stem cell maintenance GO:0019827 4 0.028
neuron differentiation GO:0030182 353 0.028
regulation of synapse organization GO:0050807 3 0.028
positive regulation of catabolic process GO:0009896 4 0.027
positive regulation of transport GO:0051050 2 0.027
response to chemical GO:0042221 320 0.027
proteasomal protein catabolic process GO:0010498 2 0.027
regulation of signaling GO:0023051 235 0.027
nucleocytoplasmic transport GO:0006913 4 0.026
cell morphogenesis involved in differentiation GO:0000904 195 0.026
compound eye development GO:0048749 2 0.026
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.026
lipid storage GO:0019915 1 0.025
determination of bilateral symmetry GO:0009855 204 0.025
central nervous system development GO:0007417 387 0.025
amine metabolic process GO:0009308 2 0.025
nitrogen compound metabolic process GO:0006807 319 0.024
regulation of protein catabolic process GO:0042176 1 0.024
nuclear transport GO:0051169 4 0.024
cell projection morphogenesis GO:0048858 244 0.024
sensory organ development GO:0007423 393 0.023
nucleobase containing compound metabolic process GO:0006139 274 0.023
regulation of multicellular organism growth GO:0040014 4 0.023
vasculature development GO:0001944 278 0.023
brain development GO:0007420 293 0.023
cellular macromolecule metabolic process GO:0044260 391 0.023
organic cyclic compound metabolic process GO:1901360 301 0.023
regulation of cell activation GO:0050865 1 0.022
modification dependent protein catabolic process GO:0019941 3 0.022
positive regulation of biological process GO:0048518 253 0.022
regulation of epithelial cell proliferation GO:0050678 3 0.022
stem cell division GO:0017145 1 0.022
developmental growth involved in morphogenesis GO:0060560 86 0.022
positive regulation of cellular catabolic process GO:0031331 3 0.022
transcription dna templated GO:0006351 181 0.022
generation of neurons GO:0048699 385 0.021
olfactory lobe development GO:0021988 4 0.021
tube morphogenesis GO:0035239 349 0.021
muscle structure development GO:0061061 196 0.021
aromatic compound biosynthetic process GO:0019438 217 0.021
autophagy GO:0006914 4 0.021
nucleic acid metabolic process GO:0090304 244 0.021
adult behavior GO:0030534 2 0.021
regulation of response to stimulus GO:0048583 269 0.021
wnt signaling pathway GO:0016055 80 0.021
regulation of reproductive process GO:2000241 4 0.021
mitochondrion organization GO:0007005 4 0.020
macromolecule biosynthetic process GO:0009059 227 0.020
actin polymerization or depolymerization GO:0008154 2 0.020
regulation of protein transport GO:0051223 3 0.020
digestive tract development GO:0048565 265 0.020
protein localization to nucleus GO:0034504 3 0.020
guanosine containing compound metabolic process GO:1901068 4 0.020
positive regulation of cell cycle GO:0045787 3 0.020
secondary metabolic process GO:0019748 3 0.020
protein acetylation GO:0006473 2 0.020
regulation of signal transduction GO:0009966 225 0.020
embryonic organ development GO:0048568 381 0.020
regulation of protein complex assembly GO:0043254 3 0.020
regulation of metabolic process GO:0019222 359 0.019
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.019
cell part morphogenesis GO:0032990 246 0.019
regulation of stem cell differentiation GO:2000736 4 0.019
positive regulation of cellular process GO:0048522 201 0.019
establishment of protein localization to organelle GO:0072594 4 0.019
regulation of primary metabolic process GO:0080090 311 0.019
peptidyl lysine acetylation GO:0018394 2 0.019
positive regulation of immune effector process GO:0002699 3 0.019
heart morphogenesis GO:0003007 156 0.019
eye development GO:0001654 277 0.019
gene expression GO:0010467 252 0.019
specification of symmetry GO:0009799 204 0.019
regulation of biological quality GO:0065008 263 0.019
rna metabolic process GO:0016070 219 0.019
regulation of muscle contraction GO:0006937 3 0.019
determination of left right symmetry GO:0007368 179 0.019
transmembrane receptor protein serine threonine kinase signaling pathway GO:0007178 68 0.019
leukocyte proliferation GO:0070661 1 0.019
organic substance biosynthetic process GO:1901576 289 0.019
meiotic nuclear division GO:0007126 4 0.018
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.018
water transport GO:0006833 15 0.018
morphogenesis of an epithelium GO:0002009 333 0.018
cellular nitrogen compound metabolic process GO:0034641 290 0.018
regulation of cellular metabolic process GO:0031323 320 0.018
cellular amine metabolic process GO:0044106 2 0.018
heterocycle biosynthetic process GO:0018130 215 0.018
cellular aromatic compound metabolic process GO:0006725 295 0.018
modification dependent macromolecule catabolic process GO:0043632 3 0.018
positive regulation of cytoskeleton organization GO:0051495 3 0.018
cellular ketone metabolic process GO:0042180 11 0.017
transcription from rna polymerase ii promoter GO:0006366 80 0.017
protein import into nucleus GO:0006606 3 0.017
cilium morphogenesis GO:0060271 85 0.017
rhombomere 5 development GO:0021571 4 0.017
gtp catabolic process GO:0006184 2 0.017
internal protein amino acid acetylation GO:0006475 2 0.017
protein targeting to nucleus GO:0044744 3 0.017
axonogenesis GO:0007409 152 0.017
regulation of wnt signaling pathway GO:0030111 53 0.017
bmp signaling pathway GO:0030509 52 0.017
response to wounding GO:0009611 116 0.017
cellular carbohydrate metabolic process GO:0044262 4 0.017
single organism nuclear import GO:1902593 3 0.017
regionalization GO:0003002 274 0.017
regulation of rna biosynthetic process GO:2001141 213 0.017
regulation of cellular ketone metabolic process GO:0010565 7 0.017
head development GO:0060322 303 0.017
embryonic limb morphogenesis GO:0030326 2 0.017
regulation of cytokine production GO:0001817 3 0.017
internal peptidyl lysine acetylation GO:0018393 2 0.016
regulation of establishment of protein localization GO:0070201 4 0.016
synaptic vesicle localization GO:0097479 1 0.016
regulation of protein targeting GO:1903533 2 0.016
mononuclear cell proliferation GO:0032943 1 0.016
dorsal ventral pattern formation GO:0009953 125 0.016
female sex differentiation GO:0046660 4 0.016
positive regulation of cytokine production GO:0001819 2 0.016
protein import GO:0017038 3 0.016
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.016
regulation of cytoplasmic transport GO:1903649 4 0.016
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.016
positive regulation of secretion GO:0051047 1 0.016
ubiquitin dependent protein catabolic process GO:0006511 3 0.016
nucleobase containing compound biosynthetic process GO:0034654 205 0.016
positive regulation of protein complex assembly GO:0031334 2 0.016
convergent extension GO:0060026 118 0.016
chordate embryonic development GO:0043009 271 0.016
organic acid metabolic process GO:0006082 31 0.016
chemotaxis GO:0006935 104 0.016
oocyte maturation GO:0001556 4 0.015
response to external stimulus GO:0009605 264 0.015
biosynthetic process GO:0009058 294 0.015
cellular response to nutrient levels GO:0031669 2 0.015
cellular component morphogenesis GO:0032989 336 0.015
regulation of multicellular organismal process GO:0051239 277 0.015
embryonic organ morphogenesis GO:0048562 274 0.015
growth GO:0040007 174 0.015
guanosine containing compound catabolic process GO:1901069 2 0.015
positive regulation of muscle cell differentiation GO:0051149 1 0.015
multicellular organismal metabolic process GO:0044236 2 0.015
protein acylation GO:0043543 3 0.015
renal tubule morphogenesis GO:0061333 1 0.015
regulation of biosynthetic process GO:0009889 250 0.015
regulation of nucleic acid templated transcription GO:1903506 213 0.015
synaptic growth at neuromuscular junction GO:0051124 2 0.015
regulation of macromolecule metabolic process GO:0060255 317 0.015
regulation of nitrogen compound metabolic process GO:0051171 251 0.015
response to hexose GO:0009746 3 0.015
sensory perception of chemical stimulus GO:0007606 3 0.014
female gonad development GO:0008585 4 0.014
regulation of cellular biosynthetic process GO:0031326 245 0.014
nucleic acid templated transcription GO:0097659 181 0.014
oxoacid metabolic process GO:0043436 31 0.014
stem cell differentiation GO:0048863 117 0.014
synaptic vesicle transport GO:0048489 1 0.014
cellular nitrogen compound biosynthetic process GO:0044271 218 0.014
protein metabolic process GO:0019538 183 0.014
cell migration GO:0016477 237 0.014
camera type eye development GO:0043010 222 0.014
response to monosaccharide GO:0034284 3 0.014
single organism metabolic process GO:0044710 217 0.014
cellular response to extracellular stimulus GO:0031668 2 0.014
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.014
cortical actin cytoskeleton organization GO:0030866 1 0.014
post embryonic organ development GO:0048569 4 0.014
regulation of intracellular protein transport GO:0033157 3 0.014
response to drug GO:0042493 3 0.014
multicellular organismal response to stress GO:0033555 2 0.014
regulation of cell projection assembly GO:0060491 4 0.014
regulation of protein import into nucleus GO:0042306 2 0.013
carboxylic acid metabolic process GO:0019752 22 0.013
regulation of cellular amino acid metabolic process GO:0006521 0 0.013
regulation of mesenchymal cell proliferation GO:0010464 1 0.013
positive regulation of secretion by cell GO:1903532 1 0.013
regulation of cellular amine metabolic process GO:0033238 0 0.013
nuclear import GO:0051170 3 0.013
regulation of gene expression GO:0010468 265 0.013
nephron morphogenesis GO:0072028 2 0.013
melanin metabolic process GO:0006582 2 0.013
regeneration GO:0031099 91 0.013
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
cellular response to external stimulus GO:0071496 2 0.013
negative regulation of cellular process GO:0048523 283 0.013
negative regulation of biological process GO:0048519 304 0.013
muscle tissue development GO:0060537 110 0.013
cellular macromolecule biosynthetic process GO:0034645 224 0.013
regulation of multicellular organismal development GO:2000026 223 0.013
regulation of rho protein signal transduction GO:0035023 2 0.013
meiotic cell cycle process GO:1903046 3 0.013
mesenchyme development GO:0060485 127 0.013
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.013
somatic muscle development GO:0007525 4 0.013
positive regulation of protein polymerization GO:0032273 2 0.013
neuron neuron synaptic transmission GO:0007270 1 0.013
lamellipodium organization GO:0097581 1 0.013
positive regulation of epithelial cell proliferation GO:0050679 1 0.013
regulation of systemic arterial blood pressure GO:0003073 1 0.013
regulation of blood vessel size GO:0050880 2 0.013
regulation of binding GO:0051098 3 0.013
organonitrogen compound metabolic process GO:1901564 74 0.013
hormone secretion GO:0046879 2 0.013
muscle cell differentiation GO:0042692 139 0.013
gtp metabolic process GO:0046039 4 0.012
microtubule organizing center organization GO:0031023 1 0.012
development of primary female sexual characteristics GO:0046545 4 0.012
response to stress GO:0006950 263 0.012
cell motility GO:0048870 244 0.012
regulation of transmembrane transporter activity GO:0022898 2 0.012
multicellular organismal signaling GO:0035637 22 0.012
negative regulation of protein transport GO:0051224 3 0.012
negative chemotaxis GO:0050919 1 0.012
mesenchymal cell proliferation GO:0010463 1 0.012
protein localization to plasma membrane GO:0072659 1 0.012
pancreas development GO:0031016 84 0.012
cellular amino acid metabolic process GO:0006520 7 0.012
regulation of nucleoside metabolic process GO:0009118 2 0.012
positive regulation of cell communication GO:0010647 56 0.012
tissue remodeling GO:0048771 4 0.012
septum transversum development GO:0003343 4 0.012
exocytosis GO:0006887 1 0.012
neuron development GO:0048666 262 0.012
regulation of blood pressure GO:0008217 1 0.012
cell substrate adhesion GO:0031589 4 0.012
regulation of syncytium formation by plasma membrane fusion GO:0060142 2 0.012
organism emergence from protective structure GO:0071684 4 0.012
positive regulation of cell activation GO:0050867 1 0.012
extrinsic apoptotic signaling pathway GO:0097191 3 0.012
negative regulation of cytoplasmic transport GO:1903650 2 0.012
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.012
establishment of synaptic vesicle localization GO:0097480 1 0.012
organic cyclic compound biosynthetic process GO:1901362 223 0.012
regulation of cell shape GO:0008360 1 0.012
lymphocyte proliferation GO:0046651 1 0.012
small molecule metabolic process GO:0044281 77 0.012
nephron epithelium morphogenesis GO:0072088 1 0.012
regulation of ion transmembrane transporter activity GO:0032412 2 0.012
regulation of developmental process GO:0050793 247 0.012
negative regulation of intracellular transport GO:0032387 3 0.012
regulation of tube size GO:0035150 2 0.012
locomotion GO:0040011 313 0.012
regulation of jun kinase activity GO:0043506 3 0.012
calcium ion import GO:0070509 4 0.012
somite development GO:0061053 96 0.012
regulation of canonical wnt signaling pathway GO:0060828 34 0.012
positive regulation of dna metabolic process GO:0051054 1 0.012
cortical cytoskeleton organization GO:0030865 1 0.012
neuroblast proliferation GO:0007405 2 0.012
retina development in camera type eye GO:0060041 146 0.012
cytoskeleton dependent cytokinesis GO:0061640 3 0.012
b cell activation GO:0042113 2 0.011
regulation of mrna processing GO:0050684 3 0.011
regulation of neurogenesis GO:0050767 87 0.011
cellular component disassembly GO:0022411 1 0.011
g protein coupled receptor signaling pathway GO:0007186 74 0.011
cardiac atrium morphogenesis GO:0003209 2 0.011
spermatid development GO:0007286 2 0.011
cell matrix adhesion GO:0007160 4 0.011
cellular protein metabolic process GO:0044267 129 0.011
macromolecule modification GO:0043412 111 0.011
immune system process GO:0002376 241 0.011
neuronal action potential GO:0019228 18 0.011
regulation of macromolecule biosynthetic process GO:0010556 225 0.011
positive regulation of notch signaling pathway GO:0045747 3 0.011
determination of heart left right asymmetry GO:0061371 117 0.011
epithelial cell morphogenesis GO:0003382 2 0.011
cellular response to starvation GO:0009267 1 0.011
developmental cell growth GO:0048588 52 0.011
alcohol biosynthetic process GO:0046165 2 0.011
multicellular organismal macromolecule metabolic process GO:0044259 2 0.011
centrosome organization GO:0051297 1 0.011
response to uv GO:0009411 3 0.011
positive regulation of stress activated mapk cascade GO:0032874 3 0.011
transport GO:0006810 220 0.011
regulation of autophagy GO:0010506 3 0.011
synaptic target recognition GO:0008039 1 0.011
erk1 and erk2 cascade GO:0070371 4 0.011
positive regulation of apoptotic signaling pathway GO:2001235 1 0.011
axon development GO:0061564 166 0.011
response to glucose GO:0009749 3 0.011
mesenchymal cell development GO:0014031 78 0.011
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.011
olfactory bulb development GO:0021772 4 0.011
regulation of protein polymerization GO:0032271 2 0.011
neuron projection guidance GO:0097485 86 0.011
anterior posterior pattern specification GO:0009952 152 0.011
developmental growth GO:0048589 166 0.011
heart development GO:0007507 313 0.011
regulation of myotube differentiation GO:0010830 2 0.011
digestive system development GO:0055123 289 0.011
ear development GO:0043583 127 0.011
small molecule catabolic process GO:0044282 3 0.011
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.011
chemosensory behavior GO:0007635 1 0.011
response to organic substance GO:0010033 153 0.011
positive regulation of cellular amine metabolic process GO:0033240 0 0.011
transmission of nerve impulse GO:0019226 19 0.011
protein polymerization GO:0051258 4 0.011
regulation of purine nucleotide catabolic process GO:0033121 2 0.011
neuromuscular process controlling balance GO:0050885 3 0.011
angiogenesis GO:0001525 158 0.011
mesenchymal cell differentiation GO:0048762 87 0.011
protein homooligomerization GO:0051260 3 0.011
cellular response to chemical stimulus GO:0070887 157 0.010
cartilage development GO:0051216 96 0.010
pronephros development GO:0048793 69 0.010
centrosome cycle GO:0007098 1 0.010
carbohydrate biosynthetic process GO:0016051 1 0.010
regulation of protein localization to plasma membrane GO:1903076 1 0.010
interspecies interaction between organisms GO:0044419 4 0.010
protein dephosphorylation GO:0006470 3 0.010
germ line stem cell maintenance GO:0030718 2 0.010
regulation of transporter activity GO:0032409 2 0.010
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.010
cell proliferation in hindbrain GO:0021534 4 0.010
actin filament based movement GO:0030048 1 0.010
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.010
rna biosynthetic process GO:0032774 181 0.010
negative regulation of protein complex assembly GO:0031333 1 0.010
negative regulation of chromosome organization GO:2001251 1 0.010
positive regulation of cell adhesion GO:0045785 1 0.010
hormone transport GO:0009914 2 0.010
neural crest cell migration GO:0001755 42 0.010
positive regulation of signal transduction GO:0009967 56 0.010
cell death GO:0008219 121 0.010
embryonic heart tube morphogenesis GO:0003143 108 0.010
negative regulation of epithelial cell proliferation GO:0050680 1 0.010
negative regulation of intracellular protein transport GO:0090317 3 0.010
regulation of nucleotide catabolic process GO:0030811 2 0.010
sequestering of calcium ion GO:0051208 3 0.010
macroautophagy GO:0016236 1 0.010
establishment of protein localization to plasma membrane GO:0090002 1 0.010
axon guidance GO:0007411 86 0.010
peptide metabolic process GO:0006518 1 0.010
gland development GO:0048732 143 0.010
positive regulation of synapse assembly GO:0051965 1 0.010
positive regulation of signaling GO:0023056 56 0.010
neuron projection morphogenesis GO:0048812 161 0.010
positive regulation of striated muscle tissue development GO:0045844 1 0.010
negative regulation of innate immune response GO:0045824 2 0.010
negative regulation of multi organism process GO:0043901 3 0.010
regulation of neural precursor cell proliferation GO:2000177 3 0.010
membrane invagination GO:0010324 1 0.010
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.010

si:ch211-159p3.1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.027
nervous system disease DOID:863 0 0.022
cancer DOID:162 0 0.015
disease of cellular proliferation DOID:14566 0 0.015
sensory system disease DOID:0050155 0 0.013
eye and adnexa disease DOID:1492 0 0.013
disease of metabolism DOID:0014667 0 0.013
organ system cancer DOID:0050686 0 0.012
musculoskeletal system disease DOID:17 0 0.011
eye disease DOID:5614 0 0.011