Danio rerio

13 known processes

samm50

sorting and assembly machinery component 50 homolog (S. cerevisiae)

(Aliases: MGC55803,samm50a,zgc:55803)

samm50 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cellular respiration GO:0045333 3 0.190
aging GO:0007568 2 0.174
embryo development ending in birth or egg hatching GO:0009792 271 0.147
Worm
larval development GO:0002164 2 0.144
Worm
apoptotic process GO:0006915 116 0.081
response to drug GO:0042493 3 0.079
nucleobase containing compound metabolic process GO:0006139 274 0.077
atp synthesis coupled electron transport GO:0042773 1 0.060
maintenance of location GO:0051235 4 0.053
regulation of protein complex assembly GO:0043254 3 0.052
mitochondrion morphogenesis GO:0070584 2 0.052
gtp metabolic process GO:0046039 4 0.049
gtp catabolic process GO:0006184 2 0.048
regulation of developmental process GO:0050793 247 0.047
multicellular organism growth GO:0035264 4 0.047
nitrogen compound metabolic process GO:0006807 319 0.046
organonitrogen compound metabolic process GO:1901564 74 0.045
guanosine containing compound catabolic process GO:1901069 2 0.043
cellular nitrogen compound metabolic process GO:0034641 290 0.043
small molecule metabolic process GO:0044281 77 0.042
organic cyclic compound metabolic process GO:1901360 301 0.037
guanosine containing compound metabolic process GO:1901068 4 0.036
cellular biosynthetic process GO:0044249 286 0.035
sensory organ development GO:0007423 393 0.034
protein polymerization GO:0051258 4 0.034
response to chemical GO:0042221 320 0.033
single organism metabolic process GO:0044710 217 0.032
positive regulation of secretion GO:0051047 1 0.032
cell death GO:0008219 121 0.032
regulation of establishment of protein localization GO:0070201 4 0.030
heterocycle metabolic process GO:0046483 290 0.029
positive regulation of apoptotic signaling pathway GO:2001235 1 0.029
mitochondrion organization GO:0007005 4 0.029
Human
modification dependent macromolecule catabolic process GO:0043632 3 0.029
cellular aromatic compound metabolic process GO:0006725 295 0.029
reproduction GO:0000003 40 0.029
Worm
positive regulation of transport GO:0051050 2 0.028
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.028
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.027
positive regulation of cellular component biogenesis GO:0044089 3 0.027
cellular nitrogen compound biosynthetic process GO:0044271 218 0.027
cell part morphogenesis GO:0032990 246 0.027
macromolecule localization GO:0033036 54 0.026
Human
positive regulation of catabolic process GO:0009896 4 0.025
oxidative phosphorylation GO:0006119 1 0.025
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.025
lipid storage GO:0019915 1 0.024
membrane fusion GO:0061025 2 0.023
locomotion GO:0040011 313 0.023
regulation of protein transport GO:0051223 3 0.022
ubiquitin dependent protein catabolic process GO:0006511 3 0.022
protein metabolic process GO:0019538 183 0.022
regulation of gtpase activity GO:0043087 2 0.022
organic acid metabolic process GO:0006082 31 0.021
dicarboxylic acid metabolic process GO:0043648 1 0.021
regulation of protein catabolic process GO:0042176 1 0.021
organelle organization GO:0006996 227 0.021
Human
establishment of localization GO:0051234 244 0.021
Human Worm
positive regulation of cellular catabolic process GO:0031331 3 0.021
regulation of cellular component organization GO:0051128 86 0.021
regulation of nucleotide catabolic process GO:0030811 2 0.021
regulation of multicellular organism growth GO:0040014 4 0.020
regulation of protein localization to nucleus GO:1900180 2 0.020
biosynthetic process GO:0009058 294 0.020
death GO:0016265 121 0.019
ribonucleoside monophosphate catabolic process GO:0009158 4 0.019
retina development in camera type eye GO:0060041 146 0.019
response to stress GO:0006950 263 0.019
purine nucleoside monophosphate catabolic process GO:0009128 4 0.018
cellular component morphogenesis GO:0032989 336 0.018
cellular protein catabolic process GO:0044257 4 0.018
regulation of metabolic process GO:0019222 359 0.018
positive regulation of biological process GO:0048518 253 0.018
regulation of biological quality GO:0065008 263 0.018
eye development GO:0001654 277 0.018
cartilage development GO:0051216 96 0.017
single organism organelle organization GO:1902589 199 0.017
Human
cellular component assembly GO:0022607 170 0.017
regulation of multicellular organismal process GO:0051239 277 0.017
regulation of meiotic cell cycle GO:0051445 1 0.017
coenzyme biosynthetic process GO:0009108 2 0.017
meiotic cell cycle process GO:1903046 3 0.016
cytoskeleton organization GO:0007010 96 0.016
nucleoside triphosphate biosynthetic process GO:0009142 2 0.016
regulation of mitochondrion organization GO:0010821 1 0.016
nucleotide metabolic process GO:0009117 28 0.016
organic cyclic compound biosynthetic process GO:1901362 223 0.016
regulation of cellular ketone metabolic process GO:0010565 7 0.015
regulation of signal transduction GO:0009966 225 0.015
multi organism process GO:0051704 134 0.015
oxoacid metabolic process GO:0043436 31 0.015
electron transport chain GO:0022900 2 0.015
mitochondrial atp synthesis coupled electron transport GO:0042775 1 0.015
cellular component disassembly GO:0022411 1 0.015
autophagy GO:0006914 4 0.015
regulation of purine nucleotide catabolic process GO:0033121 2 0.015
single organism biosynthetic process GO:0044711 71 0.014
cellular macromolecule metabolic process GO:0044260 391 0.014
regulation of stem cell differentiation GO:2000736 4 0.014
regulation of biosynthetic process GO:0009889 250 0.014
er nucleus signaling pathway GO:0006984 2 0.014
microtubule based process GO:0007017 60 0.014
phagocytosis GO:0006909 3 0.013
organic acid catabolic process GO:0016054 3 0.013
programmed cell death GO:0012501 119 0.013
germ line stem cell maintenance GO:0030718 2 0.013
connective tissue development GO:0061448 99 0.013
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.013
endoplasmic reticulum unfolded protein response GO:0030968 2 0.013
positive regulation of nucleoside metabolic process GO:0045979 1 0.013
positive regulation of nucleotide catabolic process GO:0030813 1 0.013
cellular response to nutrient levels GO:0031669 2 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
single organism nuclear import GO:1902593 3 0.013
protein homooligomerization GO:0051260 3 0.013
developmental growth GO:0048589 166 0.012
cellular response to external stimulus GO:0071496 2 0.012
exocytosis GO:0006887 1 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
atp catabolic process GO:0006200 4 0.012
regulation of autophagy GO:0010506 3 0.012
regulation of reproductive process GO:2000241 4 0.012
carboxylic acid catabolic process GO:0046395 3 0.012
regulation of reactive oxygen species metabolic process GO:2000377 2 0.012
nucleobase containing small molecule metabolic process GO:0055086 32 0.012
regulation of cytoplasmic transport GO:1903649 4 0.012
response to nutrient GO:0007584 3 0.012
cell motility GO:0048870 244 0.012
camera type eye development GO:0043010 222 0.012
meiotic nuclear division GO:0007126 4 0.012
positive regulation of cell adhesion GO:0045785 1 0.011
cellular response to starvation GO:0009267 1 0.011
proteasomal protein catabolic process GO:0010498 2 0.011
signal transduction GO:0007165 455 0.011
carbohydrate derivative biosynthetic process GO:1901137 43 0.011
regulation of gtp catabolic process GO:0033124 2 0.011
translational initiation GO:0006413 3 0.011
cellular response to extracellular stimulus GO:0031668 2 0.011
regulation of binding GO:0051098 3 0.011
muscle tissue development GO:0060537 110 0.011
regulation of filopodium assembly GO:0051489 2 0.011
neuromuscular synaptic transmission GO:0007274 2 0.011
cell migration GO:0016477 237 0.011
regulation of nucleocytoplasmic transport GO:0046822 2 0.010
nucleobase containing compound biosynthetic process GO:0034654 205 0.010
cellular ketone metabolic process GO:0042180 11 0.010
carbohydrate derivative metabolic process GO:1901135 61 0.010
regulation of localization GO:0032879 104 0.010

samm50 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
cancer DOID:162 0 0.045
disease of cellular proliferation DOID:14566 0 0.045
organ system cancer DOID:0050686 0 0.041
disease of anatomical entity DOID:7 0 0.028
nervous system disease DOID:863 0 0.019
endocrine gland cancer DOID:170 0 0.019
gastrointestinal system cancer DOID:3119 0 0.011