Danio rerio

0 known processes

syf2

SYF2 homolog, RNA splicing factor (S. cerevisiae)

(Aliases: hm:zeh0031,zgc:92835,zgc:113871,MGC113871,zeh0031)

syf2 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
embryo development ending in birth or egg hatching GO:0009792 271 0.428
Worm
regulation of meiotic cell cycle GO:0051445 1 0.407
Worm
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.281
meiotic nuclear division GO:0007126 4 0.246
Worm
larval development GO:0002164 2 0.220
Worm
regulation of rna metabolic process GO:0051252 224 0.203
regulation of primary metabolic process GO:0080090 311 0.148
meiotic chromosome segregation GO:0045132 3 0.137
cellular nitrogen compound metabolic process GO:0034641 290 0.122
alternative mrna splicing via spliceosome GO:0000380 1 0.122
regulation of mrna splicing via spliceosome GO:0048024 3 0.116
aging GO:0007568 2 0.112
lipid storage GO:0019915 1 0.103
cellular aromatic compound metabolic process GO:0006725 295 0.101
regulation of mrna processing GO:0050684 3 0.099
regulation of metabolic process GO:0019222 359 0.097
regulation of macromolecule metabolic process GO:0060255 317 0.092
maintenance of location GO:0051235 4 0.092
regulation of cellular metabolic process GO:0031323 320 0.089
cellular macromolecule metabolic process GO:0044260 391 0.089
nucleobase containing compound metabolic process GO:0006139 274 0.087
nitrogen compound metabolic process GO:0006807 319 0.086
macromolecule biosynthetic process GO:0009059 227 0.078
neuron differentiation GO:0030182 353 0.075
cell projection morphogenesis GO:0048858 244 0.069
response to external stimulus GO:0009605 264 0.069
nucleic acid metabolic process GO:0090304 244 0.068
meiotic cell cycle process GO:1903046 3 0.067
organic cyclic compound metabolic process GO:1901360 301 0.065
gene expression GO:0010467 252 0.065
hepaticobiliary system development GO:0061008 98 0.065
nuclear division GO:0000280 23 0.063
Worm
protein metabolic process GO:0019538 183 0.063
rna metabolic process GO:0016070 219 0.062
stem cell proliferation GO:0072089 4 0.061
negative regulation of biological process GO:0048519 304 0.059
organelle organization GO:0006996 227 0.057
Worm
programmed cell death GO:0012501 119 0.056
heterocycle metabolic process GO:0046483 290 0.053
regulation of mitotic cell cycle GO:0007346 25 0.053
regulation of macromolecule biosynthetic process GO:0010556 225 0.052
chromosome organization involved in meiosis GO:0070192 1 0.051
cellular biosynthetic process GO:0044249 286 0.051
cell part morphogenesis GO:0032990 246 0.047
protein acylation GO:0043543 3 0.046
regulation of gene expression GO:0010468 265 0.045
regulation of rna biosynthetic process GO:2001141 213 0.045
cell cycle process GO:0022402 53 0.044
Worm
neuron development GO:0048666 262 0.043
regulation of epithelial cell proliferation GO:0050678 3 0.043
cellular protein metabolic process GO:0044267 129 0.041
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.041
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.041
synaptic vesicle localization GO:0097479 1 0.039
mechanosensory behavior GO:0007638 2 0.039
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.038
cell proliferation GO:0008283 80 0.036
Worm
modification dependent protein catabolic process GO:0019941 3 0.034
mrna splicing via spliceosome GO:0000398 10 0.033
regulation of mrna metabolic process GO:1903311 6 0.033
synaptic vesicle recycling GO:0036465 1 0.033
single organism metabolic process GO:0044710 217 0.033
regulation of cellular biosynthetic process GO:0031326 245 0.033
establishment of synaptic vesicle localization GO:0097480 1 0.031
regulation of nitrogen compound metabolic process GO:0051171 251 0.031
mitotic cell cycle GO:0000278 64 0.031
neuroblast proliferation GO:0007405 2 0.030
dna templated transcription elongation GO:0006354 3 0.030
liver development GO:0001889 96 0.030
rna biosynthetic process GO:0032774 181 0.029
protein acetylation GO:0006473 2 0.029
meiosis i GO:0007127 1 0.028
histone lysine methylation GO:0034968 12 0.028
cell cycle GO:0007049 93 0.027
Worm
lipid metabolic process GO:0006629 52 0.027
macromolecule modification GO:0043412 111 0.027
regulation of cellular component organization GO:0051128 86 0.026
Worm
generation of neurons GO:0048699 385 0.026
protein complex disassembly GO:0043241 1 0.026
macromolecular complex subunit organization GO:0043933 74 0.026
regulation of biosynthetic process GO:0009889 250 0.025
transcription from rna polymerase iii promoter GO:0006383 1 0.025
regulation of binding GO:0051098 3 0.025
vasculature development GO:0001944 278 0.024
gland development GO:0048732 143 0.024
cellular protein modification process GO:0006464 100 0.024
regulation of cell cycle GO:0051726 52 0.024
Worm
cell morphogenesis GO:0000902 289 0.024
response to nicotine GO:0035094 2 0.023
actin filament bundle assembly GO:0051017 6 0.023
pathway restricted smad protein phosphorylation GO:0060389 1 0.023
meiosis ii GO:0007135 1 0.023
sex determination GO:0007530 1 0.022
negative regulation of stem cell differentiation GO:2000737 2 0.022
regulation of biological quality GO:0065008 263 0.022
single organism organelle organization GO:1902589 199 0.022
positive regulation of gene expression GO:0010628 71 0.022
positive regulation of cell cycle GO:0045787 3 0.021
cellular component morphogenesis GO:0032989 336 0.021
proteasomal protein catabolic process GO:0010498 2 0.021
cellular component movement GO:0006928 335 0.021
Worm
stem cell maintenance GO:0019827 4 0.020
compound eye development GO:0048749 2 0.020
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.020
cellular component assembly GO:0022607 170 0.020
cell aging GO:0007569 2 0.020
modification dependent macromolecule catabolic process GO:0043632 3 0.020
stem cell division GO:0017145 1 0.020
cellular protein catabolic process GO:0044257 4 0.020
actin mediated cell contraction GO:0070252 1 0.020
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.020
mrna metabolic process GO:0016071 20 0.020
cellular nitrogen compound biosynthetic process GO:0044271 218 0.019
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.019
regulation of nucleic acid templated transcription GO:1903506 213 0.019
cellular amino acid metabolic process GO:0006520 7 0.019
central nervous system development GO:0007417 387 0.019
peptidyl lysine acetylation GO:0018394 2 0.019
positive regulation of cellular process GO:0048522 201 0.019
regulation of cellular amino acid metabolic process GO:0006521 0 0.018
development of primary female sexual characteristics GO:0046545 4 0.018
negative regulation of epithelial cell proliferation GO:0050680 1 0.018
regulation of ph GO:0006885 3 0.018
positive regulation of protein complex assembly GO:0031334 2 0.018
regulation of oocyte development GO:0060281 3 0.018
cellular component biogenesis GO:0044085 178 0.018
cell projection organization GO:0030030 284 0.018
single organism membrane fusion GO:0044801 2 0.018
rna splicing GO:0008380 16 0.018
positive regulation of biological process GO:0048518 253 0.018
multicellular organism growth GO:0035264 4 0.018
rna localization GO:0006403 4 0.017
g2 dna damage checkpoint GO:0031572 3 0.017
regulation of stem cell differentiation GO:2000736 4 0.017
heart development GO:0007507 313 0.017
transcription dna templated GO:0006351 181 0.017
regulation of cell shape GO:0008360 1 0.017
pole plasm assembly GO:0007315 4 0.017
apoptotic process GO:0006915 116 0.016
organic substance biosynthetic process GO:1901576 289 0.016
neuron projection development GO:0031175 180 0.016
negative regulation of catalytic activity GO:0043086 21 0.016
germ line stem cell maintenance GO:0030718 2 0.016
positive regulation of metabolic process GO:0009893 108 0.016
intracellular mrna localization GO:0008298 1 0.016
locomotion GO:0040011 313 0.015
Worm
cellular response to external stimulus GO:0071496 2 0.015
regulation of cellular amine metabolic process GO:0033238 0 0.015
biosynthetic process GO:0009058 294 0.015
cytoplasm organization GO:0007028 4 0.015
dna templated transcription initiation GO:0006352 1 0.015
negative regulation of cellular process GO:0048523 283 0.015
ubiquitin dependent protein catabolic process GO:0006511 3 0.015
startle response GO:0001964 4 0.015
growth GO:0040007 174 0.015
golgi vesicle transport GO:0048193 3 0.015
response to stress GO:0006950 263 0.015
internal peptidyl lysine acetylation GO:0018393 2 0.015
lateral inhibition GO:0046331 1 0.015
regulation of protein catabolic process GO:0042176 1 0.014
regulation of cell cycle process GO:0010564 20 0.014
Worm
axonogenesis GO:0007409 152 0.014
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.014
oxoacid metabolic process GO:0043436 31 0.014
establishment of vesicle localization GO:0051650 24 0.014
membrane fusion GO:0061025 2 0.014
regulation of transcription from rna polymerase iii promoter GO:0006359 1 0.014
post golgi vesicle mediated transport GO:0006892 1 0.014
regulation of protein ubiquitination GO:0031396 3 0.014
positive regulation of nucleic acid templated transcription GO:1903508 57 0.014
embryonic organ development GO:0048568 381 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
behavior GO:0007610 74 0.014
organelle fusion GO:0048284 3 0.013
internal protein amino acid acetylation GO:0006475 2 0.013
regulation of cellular ketone metabolic process GO:0010565 7 0.013
positive regulation of cellular biosynthetic process GO:0031328 68 0.013
cellular response to biotic stimulus GO:0071216 3 0.013
cellular response to nutrient levels GO:0031669 2 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
aromatic compound biosynthetic process GO:0019438 217 0.013
synaptic vesicle transport GO:0048489 1 0.013
regulation of molecular function GO:0065009 70 0.013
negative regulation of defense response GO:0031348 2 0.013
regulation of protein complex disassembly GO:0043244 1 0.013
female sex differentiation GO:0046660 4 0.013
nucleic acid templated transcription GO:0097659 181 0.013
heart process GO:0003015 71 0.013
phosphate containing compound metabolic process GO:0006796 108 0.013
protein modification process GO:0036211 100 0.013
cellular component disassembly GO:0022411 1 0.013
nucleobase containing compound biosynthetic process GO:0034654 205 0.013
rna processing GO:0006396 25 0.013
heart morphogenesis GO:0003007 156 0.013
organelle fission GO:0048285 23 0.012
Worm
regulation of synapse assembly GO:0051963 3 0.012
mrna processing GO:0006397 14 0.012
nuclear import GO:0051170 3 0.012
regulation of cell cycle phase transition GO:1901987 8 0.012
cell cycle g2 m phase transition GO:0044839 4 0.012
carboxylic acid metabolic process GO:0019752 22 0.012
microtubule based process GO:0007017 60 0.012
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.012
response to biotic stimulus GO:0009607 97 0.012
positive regulation of notch signaling pathway GO:0045747 3 0.012
cellular macromolecule biosynthetic process GO:0034645 224 0.012
cell cycle g1 s phase transition GO:0044843 1 0.012
cell morphogenesis involved in differentiation GO:0000904 195 0.012
somite development GO:0061053 96 0.011
regulation of dna templated transcription elongation GO:0032784 3 0.011
amine metabolic process GO:0009308 2 0.011
somitogenesis GO:0001756 87 0.011
negative regulation of kinase activity GO:0033673 4 0.011
regulation of synaptic plasticity GO:0048167 1 0.011
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.011
neuron projection morphogenesis GO:0048812 161 0.011
cell surface receptor signaling pathway GO:0007166 325 0.011
protein dephosphorylation GO:0006470 3 0.011
maternal determination of anterior posterior axis embryo GO:0008358 4 0.011
negative regulation of chromosome organization GO:2001251 1 0.011
cellular response to starvation GO:0009267 1 0.011
cellular amine metabolic process GO:0044106 2 0.011
negative regulation of nucleic acid templated transcription GO:1903507 45 0.011
establishment of protein localization to organelle GO:0072594 4 0.011
regulation of epithelial to mesenchymal transition GO:0010717 3 0.011
heterocycle biosynthetic process GO:0018130 215 0.011
sensory organ development GO:0007423 393 0.011
mitochondrion organization GO:0007005 4 0.011
mitotic dna integrity checkpoint GO:0044774 4 0.011
positive regulation of dna templated transcription elongation GO:0032786 1 0.011
spermatid differentiation GO:0048515 2 0.011
hatching GO:0035188 4 0.011
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.011
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.011
g1 s transition of mitotic cell cycle GO:0000082 1 0.011
female gonad development GO:0008585 4 0.011
regulation of endothelial cell proliferation GO:0001936 1 0.011
mitotic nuclear division GO:0007067 18 0.010
autophagy GO:0006914 4 0.010
regulation of calcium ion transport GO:0051924 2 0.010
muscle structure development GO:0061061 196 0.010
negative regulation of metabolic process GO:0009892 86 0.010
positive regulation of cellular metabolic process GO:0031325 94 0.010
negative regulation of translation GO:0017148 1 0.010
reproduction GO:0000003 40 0.010
Worm
secondary metabolic process GO:0019748 3 0.010
negative regulation of chromatin modification GO:1903309 1 0.010
rna splicing via transesterification reactions GO:0000375 10 0.010
alpha amino acid metabolic process GO:1901605 3 0.010
regulation of multicellular organismal development GO:2000026 223 0.010

syf2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 0 0.014