Danio rerio

0 known processes

pabpc4

poly(A) binding protein, cytoplasmic 4 (inducible form)

(Aliases: sb:cb12,cb12)

pabpc4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
striated muscle cell differentiation GO:0051146 129 0.367
striated muscle cell development GO:0055002 108 0.313
single organism organelle organization GO:1902589 199 0.306
cellular component assembly involved in morphogenesis GO:0010927 107 0.274
muscle cell development GO:0055001 115 0.267
muscle structure development GO:0061061 196 0.228
embryo development ending in birth or egg hatching GO:0009792 271 0.214
Worm
organelle assembly GO:0070925 110 0.209
cellular component assembly GO:0022607 170 0.200
muscle cell differentiation GO:0042692 139 0.197
sarcomere organization GO:0045214 26 0.192
larval development GO:0002164 2 0.181
Worm
organelle organization GO:0006996 227 0.180
cellular component morphogenesis GO:0032989 336 0.154
heart development GO:0007507 313 0.149
Zebrafish
myofibril assembly GO:0030239 48 0.138
transmembrane transport GO:0055085 120 0.133
cellular component biogenesis GO:0044085 178 0.132
heart contraction GO:0060047 71 0.124
regionalization GO:0003002 274 0.120
muscle contraction GO:0006936 18 0.105
aging GO:0007568 2 0.102
Worm
muscle organ development GO:0007517 101 0.097
actomyosin structure organization GO:0031032 53 0.097
regulation of heart contraction GO:0008016 32 0.096
ventricular cardiac myofibril assembly GO:0055005 4 0.093
cytoskeleton organization GO:0007010 96 0.091
ion transport GO:0006811 114 0.080
mitochondrion organization GO:0007005 4 0.079
chordate embryonic development GO:0043009 271 0.073
ion transmembrane transport GO:0034220 91 0.073
segmentation GO:0035282 97 0.072
skeletal muscle organ development GO:0060538 78 0.068
single organism localization GO:1902578 225 0.068
positive regulation of cellular catabolic process GO:0031331 3 0.068
positive regulation of blood circulation GO:1903524 2 0.067
transport GO:0006810 220 0.066
Worm
positive regulation of catabolic process GO:0009896 4 0.065
heart process GO:0003015 71 0.064
lipid storage GO:0019915 1 0.064
organonitrogen compound biosynthetic process GO:1901566 47 0.062
response to external stimulus GO:0009605 264 0.062
actin filament based process GO:0030029 64 0.061
establishment of localization GO:0051234 244 0.061
Worm
somitogenesis GO:0001756 87 0.058
regulation of reproductive process GO:2000241 4 0.058
phosphorylation GO:0016310 69 0.054
regulation of cardiac muscle contraction GO:0055117 2 0.052
regulation of cell shape GO:0008360 1 0.051
regulation of metabolic process GO:0019222 359 0.051
maintenance of location GO:0051235 4 0.051
adherens junction organization GO:0034332 4 0.050
cellular biosynthetic process GO:0044249 286 0.050
organophosphate biosynthetic process GO:0090407 23 0.049
somite development GO:0061053 96 0.047
hematopoietic or lymphoid organ development GO:0048534 191 0.046
response to stress GO:0006950 263 0.044
cellular component movement GO:0006928 335 0.044
cell surface receptor signaling pathway GO:0007166 325 0.044
muscle fiber development GO:0048747 52 0.043
cellular protein metabolic process GO:0044267 129 0.043
regulation of mrna processing GO:0050684 3 0.043
organonitrogen compound metabolic process GO:1901564 74 0.043
purine ribonucleoside biosynthetic process GO:0046129 2 0.042
phototransduction GO:0007602 2 0.042
wound healing GO:0042060 90 0.042
neuron projection development GO:0031175 180 0.042
cell morphogenesis GO:0000902 289 0.041
morphogenesis of an epithelium GO:0002009 333 0.041
system process GO:0003008 185 0.039
circulatory system process GO:0003013 87 0.039
nucleobase containing compound biosynthetic process GO:0034654 205 0.039
actin cytoskeleton organization GO:0030036 63 0.039
determination of left right symmetry GO:0007368 179 0.039
cell projection morphogenesis GO:0048858 244 0.038
negative regulation of protein phosphorylation GO:0001933 4 0.038
organic substance biosynthetic process GO:1901576 289 0.038
sensory organ development GO:0007423 393 0.037
protein import GO:0017038 3 0.037
response to chemical GO:0042221 320 0.037
single organism transport GO:0044765 206 0.036
nucleoside biosynthetic process GO:0009163 2 0.036
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.035
myotube differentiation GO:0014902 45 0.035
growth GO:0040007 174 0.034
Worm
heart morphogenesis GO:0003007 156 0.034
regulation of cell matrix adhesion GO:0001952 1 0.034
developmental growth GO:0048589 166 0.033
cardiac muscle cell development GO:0055013 20 0.033
muscle system process GO:0003012 20 0.033
lens development in camera type eye GO:0002088 22 0.033
cellular amino acid metabolic process GO:0006520 7 0.033
heart looping GO:0001947 94 0.032
modification dependent protein catabolic process GO:0019941 3 0.032
amino acid transport GO:0006865 2 0.032
neuron development GO:0048666 262 0.031
nucleoside triphosphate biosynthetic process GO:0009142 2 0.031
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.031
negative regulation of biological process GO:0048519 304 0.031
oxoacid metabolic process GO:0043436 31 0.031
regulation of striated muscle contraction GO:0006942 2 0.031
spermatid development GO:0007286 2 0.031
amine metabolic process GO:0009308 2 0.030
organic acid metabolic process GO:0006082 31 0.030
neuron differentiation GO:0030182 353 0.030
translational initiation GO:0006413 3 0.030
homeostatic process GO:0042592 142 0.030
purine nucleoside triphosphate biosynthetic process GO:0009145 2 0.029
cell substrate adhesion GO:0031589 4 0.029
signal transduction GO:0007165 455 0.029
response to wounding GO:0009611 116 0.029
regulation of ion transmembrane transporter activity GO:0032412 2 0.028
single organism metabolic process GO:0044710 217 0.028
positive regulation of nucleoside metabolic process GO:0045979 1 0.028
regulation of biological quality GO:0065008 263 0.028
cellular protein catabolic process GO:0044257 4 0.028
ubiquitin dependent protein catabolic process GO:0006511 3 0.027
cellular amine metabolic process GO:0044106 2 0.027
head development GO:0060322 303 0.027
meiotic nuclear division GO:0007126 4 0.026
locomotion GO:0040011 313 0.026
embryonic heart tube development GO:0035050 133 0.026
negative regulation of epithelial cell proliferation GO:0050680 1 0.025
cellular localization GO:0051641 97 0.025
cellular protein modification process GO:0006464 100 0.025
eye development GO:0001654 277 0.025
myotube cell development GO:0014904 35 0.025
cardiac cell development GO:0055006 21 0.025
nitric oxide metabolic process GO:0046209 2 0.025
transmission of nerve impulse GO:0019226 19 0.024
cardiocyte differentiation GO:0035051 44 0.024
organic cyclic compound biosynthetic process GO:1901362 223 0.024
modification dependent macromolecule catabolic process GO:0043632 3 0.024
taxis GO:0042330 109 0.023
regulation of developmental process GO:0050793 247 0.023
aromatic compound biosynthetic process GO:0019438 217 0.023
regulation of myotube differentiation GO:0010830 2 0.023
regulation of transmembrane transporter activity GO:0022898 2 0.023
regulation of purine nucleotide catabolic process GO:0033121 2 0.023
phosphorus metabolic process GO:0006793 109 0.023
purine ribonucleoside triphosphate biosynthetic process GO:0009206 2 0.023
intracellular signal transduction GO:0035556 85 0.022
positive regulation of transport GO:0051050 2 0.022
negative regulation of cellular process GO:0048523 283 0.022
nucleocytoplasmic transport GO:0006913 4 0.022
cellular component disassembly GO:0022411 1 0.021
embryonic organ development GO:0048568 381 0.021
immune system process GO:0002376 241 0.021
blood circulation GO:0008015 87 0.021
regulation of macromolecule metabolic process GO:0060255 317 0.021
nitrogen compound metabolic process GO:0006807 319 0.021
Worm
heterocycle metabolic process GO:0046483 290 0.021
Worm
positive regulation of heart contraction GO:0045823 2 0.021
ribonucleoside biosynthetic process GO:0042455 2 0.021
regulation of cellular amine metabolic process GO:0033238 0 0.021
myoblast fusion GO:0007520 10 0.021
regulation of nucleoside metabolic process GO:0009118 2 0.021
regulation of catalytic activity GO:0050790 55 0.021
sensory organ morphogenesis GO:0090596 200 0.021
protein metabolic process GO:0019538 183 0.021
macromolecule modification GO:0043412 111 0.020
cellular macromolecule metabolic process GO:0044260 391 0.020
Worm
regulation of protein metabolic process GO:0051246 56 0.020
regulation of phosphorus metabolic process GO:0051174 43 0.020
cytokinesis GO:0000910 3 0.020
regulation of muscle contraction GO:0006937 3 0.020
carboxylic acid metabolic process GO:0019752 22 0.020
single organism membrane organization GO:0044802 20 0.019
tissue regeneration GO:0042246 74 0.019
cell migration GO:0016477 237 0.019
protein localization to plasma membrane GO:0072659 1 0.019
rna 3 end processing GO:0031123 2 0.019
intestinal cholesterol absorption GO:0030299 2 0.019
striated muscle tissue development GO:0014706 110 0.019
regulation of cellular metabolic process GO:0031323 320 0.019
skeletal muscle fiber development GO:0048741 35 0.019
muscle tissue development GO:0060537 110 0.019
establishment of protein localization to organelle GO:0072594 4 0.019
response to abiotic stimulus GO:0009628 122 0.018
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.018
fin regeneration GO:0031101 51 0.018
regulation of signaling GO:0023051 235 0.018
actin polymerization or depolymerization GO:0008154 2 0.018
protein complex disassembly GO:0043241 1 0.018
metal ion transport GO:0030001 58 0.018
organic cyclic compound metabolic process GO:1901360 301 0.018
Worm
positive regulation of cellular component biogenesis GO:0044089 3 0.018
positive regulation of nucleotide catabolic process GO:0030813 1 0.018
anterior posterior pattern specification GO:0009952 152 0.018
spermatid differentiation GO:0048515 2 0.018
cartilage morphogenesis GO:0060536 13 0.018
small molecule metabolic process GO:0044281 77 0.018
reactive nitrogen species metabolic process GO:2001057 0 0.017
regulation of cell differentiation GO:0045595 142 0.017
pyruvate metabolic process GO:0006090 1 0.017
regulation of protein polymerization GO:0032271 2 0.017
negative regulation of kinase activity GO:0033673 4 0.017
cell projection organization GO:0030030 284 0.017
regulation of cellular amino acid metabolic process GO:0006521 0 0.017
mitotic cell cycle process GO:1903047 48 0.017
nitric oxide biosynthetic process GO:0006809 2 0.017
tube morphogenesis GO:0035239 349 0.017
epithelial tube morphogenesis GO:0060562 148 0.017
cellular aromatic compound metabolic process GO:0006725 295 0.017
Worm
notochord development GO:0030903 54 0.017
carbohydrate homeostasis GO:0033500 1 0.017
protein polymerization GO:0051258 4 0.017
single organism nuclear import GO:1902593 3 0.017
generation of neurons GO:0048699 385 0.016
regulation of protein complex assembly GO:0043254 3 0.016
heterocycle biosynthetic process GO:0018130 215 0.016
regulation of translational initiation GO:0006446 1 0.016
cell matrix adhesion GO:0007160 4 0.016
localization of cell GO:0051674 244 0.016
atp catabolic process GO:0006200 4 0.016
dorsal ventral pattern formation GO:0009953 125 0.016
microtubule organizing center organization GO:0031023 1 0.016
actin filament based movement GO:0030048 1 0.016
apoptotic process GO:0006915 116 0.016
rna localization GO:0006403 4 0.016
regulation of cellular component organization GO:0051128 86 0.016
protein modification process GO:0036211 100 0.016
regulation of system process GO:0044057 40 0.015
protein localization to nucleus GO:0034504 3 0.015
positive regulation of biological process GO:0048518 253 0.015
macromolecular complex disassembly GO:0032984 1 0.015
regulation of signal transduction GO:0009966 225 0.015
skeletal muscle tissue development GO:0007519 67 0.015
negative regulation of response to stimulus GO:0048585 104 0.015
multi organism process GO:0051704 134 0.015
Worm
carbohydrate derivative biosynthetic process GO:1901137 43 0.015
embryonic heart tube morphogenesis GO:0003143 108 0.015
cellular response to chemical stimulus GO:0070887 157 0.015
stem cell proliferation GO:0072089 4 0.015
biosynthetic process GO:0009058 294 0.015
protein import into nucleus GO:0006606 3 0.015
regulation of receptor activity GO:0010469 2 0.015
cellular nitrogen compound metabolic process GO:0034641 290 0.015
Worm
response to unfolded protein GO:0006986 2 0.015
eye morphogenesis GO:0048592 144 0.015
apoptotic process involved in development GO:1902742 2 0.015
immune system development GO:0002520 191 0.014
regulation of cytoplasmic transport GO:1903649 4 0.014
odontogenesis of dentin containing tooth GO:0042475 1 0.014
purine nucleoside biosynthetic process GO:0042451 2 0.014
regulation of cellular ketone metabolic process GO:0010565 7 0.014
negative regulation of signaling GO:0023057 96 0.014
centrosome organization GO:0051297 1 0.014
phagocytosis GO:0006909 3 0.014
regulation of response to cytokine stimulus GO:0060759 3 0.014
regulation of cell substrate adhesion GO:0010810 1 0.014
regulation of multicellular organismal process GO:0051239 277 0.014
regulation of transporter activity GO:0032409 2 0.014
monovalent inorganic cation transport GO:0015672 42 0.014
female sex differentiation GO:0046660 4 0.014
carbohydrate derivative metabolic process GO:1901135 61 0.014
regulation of protein targeting GO:1903533 2 0.014
endocardial cushion morphogenesis GO:0003203 3 0.014
negative regulation of protein kinase activity GO:0006469 4 0.014
central nervous system development GO:0007417 387 0.014
cation transmembrane transport GO:0098655 65 0.014
ribonucleoside triphosphate biosynthetic process GO:0009201 2 0.013
regulation of protein catabolic process GO:0042176 1 0.013
carbohydrate metabolic process GO:0005975 12 0.013
regulation of membrane potential GO:0042391 23 0.013
cation transport GO:0006812 81 0.013
regulation of intracellular protein transport GO:0033157 3 0.013
regulation of mrna splicing via spliceosome GO:0048024 3 0.013
cytoskeleton dependent cytokinesis GO:0061640 3 0.013
response to hexose GO:0009746 3 0.013
gene expression GO:0010467 252 0.013
positive regulation of wound healing GO:0090303 1 0.013
muscle hypertrophy GO:0014896 2 0.013
sensory system development GO:0048880 76 0.013
determination of bilateral symmetry GO:0009855 204 0.013
gtp metabolic process GO:0046039 4 0.013
cell part morphogenesis GO:0032990 246 0.013
cardiac muscle cell differentiation GO:0055007 30 0.013
growth plate cartilage development GO:0003417 2 0.013
protein phosphorylation GO:0006468 47 0.013
macromolecular complex assembly GO:0065003 35 0.013
enzyme linked receptor protein signaling pathway GO:0007167 106 0.012
axon development GO:0061564 166 0.012
protein complex subunit organization GO:0071822 46 0.012
negative regulation of mrna metabolic process GO:1903312 3 0.012
nuclear division GO:0000280 23 0.012
cellular nitrogen compound biosynthetic process GO:0044271 218 0.012
ventricular cardiac muscle cell differentiation GO:0055012 6 0.012
blood vessel development GO:0001568 246 0.012
inorganic cation transmembrane transport GO:0098662 50 0.012
cell proliferation in hindbrain GO:0021534 4 0.012
negative regulation of translation GO:0017148 1 0.012
regulation of calcium ion transport GO:0051924 2 0.012
ventricular cardiac muscle cell development GO:0055015 5 0.012
regulation of cellular protein metabolic process GO:0032268 52 0.012
positive regulation of cellular amine metabolic process GO:0033240 0 0.012
ribosome assembly GO:0042255 1 0.012
cellular response to external stimulus GO:0071496 2 0.012
nucleic acid transport GO:0050657 2 0.012
regulation of protein transport GO:0051223 3 0.012
protein homooligomerization GO:0051260 3 0.012
protein localization to membrane GO:0072657 9 0.012
lipid homeostasis GO:0055088 3 0.012
s adenosylmethionine metabolic process GO:0046500 1 0.012
glucose homeostasis GO:0042593 1 0.012
g1 s transition of mitotic cell cycle GO:0000082 1 0.012
regulation of behavior GO:0050795 24 0.012
regulation of multicellular organism growth GO:0040014 4 0.011
cell morphogenesis involved in differentiation GO:0000904 195 0.011
cellular response to organic substance GO:0071310 105 0.011
mitotic cell cycle GO:0000278 64 0.011
regulation of anatomical structure morphogenesis GO:0022603 130 0.011
neuron projection morphogenesis GO:0048812 161 0.011
negative regulation of catabolic process GO:0009895 3 0.011
regulation of jun kinase activity GO:0043506 3 0.011
regulation of organelle organization GO:0033043 29 0.011
extracellular matrix organization GO:0030198 27 0.011
regulation of establishment of protein localization GO:0070201 4 0.011
cardiac muscle contraction GO:0060048 6 0.011
cranial nerve development GO:0021545 42 0.011
regulation of blood vessel size GO:0050880 2 0.011
muscle cell migration GO:0014812 4 0.011
negative regulation of mapk cascade GO:0043409 4 0.011
macromolecular complex subunit organization GO:0043933 74 0.011
multicellular organism growth GO:0035264 4 0.011
positive regulation of skeletal muscle tissue development GO:0048643 1 0.011
regulation of response to stimulus GO:0048583 269 0.011
cell motility GO:0048870 244 0.011
membrane repolarization GO:0086009 2 0.011
cell proliferation GO:0008283 80 0.011
axonogenesis GO:0007409 152 0.010
protein depolymerization GO:0051261 1 0.010
extrinsic apoptotic signaling pathway GO:0097191 3 0.010
cardiac muscle tissue development GO:0048738 48 0.010
alternative mrna splicing via spliceosome GO:0000380 1 0.010
guanosine containing compound metabolic process GO:1901068 4 0.010
negative regulation of dna metabolic process GO:0051053 4 0.010
limb bud formation GO:0060174 2 0.010
female gonad development GO:0008585 4 0.010
macromolecule localization GO:0033036 54 0.010
neuromuscular synaptic transmission GO:0007274 2 0.010
cell cycle g1 s phase transition GO:0044843 1 0.010
skeletal system morphogenesis GO:0048705 102 0.010
camera type eye development GO:0043010 222 0.010
cellular homeostasis GO:0019725 26 0.010
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.010
regulation of nucleocytoplasmic transport GO:0046822 2 0.010
digestive tract morphogenesis GO:0048546 231 0.010

pabpc4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.062
musculoskeletal system disease DOID:17 0 0.030
myopathy DOID:423 0 0.016
muscular disease DOID:0080000 0 0.016
heart disease DOID:114 0 0.016
cardiomyopathy DOID:0050700 0 0.016
cardiovascular system disease DOID:1287 0 0.016
muscle tissue disease DOID:66 0 0.016
immune system disease DOID:2914 0 0.012
intrinsic cardiomyopathy DOID:0060036 0 0.012
nervous system disease DOID:863 0 0.011