Danio rerio

0 known processes

col5a3

collagen, type V, alpha 3

(Aliases: col11a1,wu:fb54e07)

col5a3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cellular component morphogenesis GO:0032989 336 0.273
digestive system development GO:0055123 289 0.200
determination of bilateral symmetry GO:0009855 204 0.152
embryonic organ morphogenesis GO:0048562 274 0.127
embryonic organ development GO:0048568 381 0.125
cilium morphogenesis GO:0060271 85 0.115
embryonic heart tube morphogenesis GO:0003143 108 0.114
embryonic heart tube development GO:0035050 133 0.104
digestive tract development GO:0048565 265 0.104
cellular component assembly involved in morphogenesis GO:0010927 107 0.092
digestive tract morphogenesis GO:0048546 231 0.091
larval development GO:0002164 2 0.087
determination of heart left right asymmetry GO:0061371 117 0.086
muscle structure development GO:0061061 196 0.076
eye development GO:0001654 277 0.074
organelle organization GO:0006996 227 0.072
muscle cell differentiation GO:0042692 139 0.070
establishment of protein localization to organelle GO:0072594 4 0.070
specification of symmetry GO:0009799 204 0.068
determination of left right symmetry GO:0007368 179 0.068
estrogen metabolic process GO:0008210 2 0.062
regulation of reproductive process GO:2000241 4 0.062
amine metabolic process GO:0009308 2 0.060
positive regulation of leukocyte mediated cytotoxicity GO:0001912 1 0.060
heart morphogenesis GO:0003007 156 0.058
cellular macromolecule metabolic process GO:0044260 391 0.056
immune system process GO:0002376 241 0.056
notochord development GO:0030903 54 0.055
leukocyte proliferation GO:0070661 1 0.053
organelle assembly GO:0070925 110 0.051
positive regulation of cell activation GO:0050867 1 0.050
morphogenesis of an epithelium GO:0002009 333 0.050
pectoral fin development GO:0033339 50 0.049
negative regulation of cellular process GO:0048523 283 0.046
maintenance of location GO:0051235 4 0.045
generation of neurons GO:0048699 385 0.044
cell surface receptor signaling pathway GO:0007166 325 0.044
chordate embryonic development GO:0043009 271 0.043
neuron development GO:0048666 262 0.043
cellular amine metabolic process GO:0044106 2 0.043
tube morphogenesis GO:0035239 349 0.042
negative regulation of kinase activity GO:0033673 4 0.042
neuron differentiation GO:0030182 353 0.041
sensory organ development GO:0007423 393 0.041
retina development in camera type eye GO:0060041 146 0.041
response to organic substance GO:0010033 153 0.040
regionalization GO:0003002 274 0.040
response to corticosteroid GO:0031960 1 0.040
protein targeting to nucleus GO:0044744 3 0.040
cellular component assembly GO:0022607 170 0.039
protein localization to nucleus GO:0034504 3 0.038
embryonic skeletal system morphogenesis GO:0048704 93 0.038
developmental growth GO:0048589 166 0.037
striated muscle tissue development GO:0014706 110 0.036
heart development GO:0007507 313 0.036
cellular carbohydrate metabolic process GO:0044262 4 0.035
skeletal system development GO:0001501 181 0.035
embryonic cranial skeleton morphogenesis GO:0048701 90 0.034
somite development GO:0061053 96 0.034
gene expression GO:0010467 252 0.034
oxidation reduction process GO:0055114 41 0.033
immune system development GO:0002520 191 0.032
negative regulation of cell differentiation GO:0045596 46 0.032
regulation of cell activation GO:0050865 1 0.031
negative regulation of protein kinase activity GO:0006469 4 0.031
transcription from rna polymerase ii promoter GO:0006366 80 0.031
regulation of rna biosynthetic process GO:2001141 213 0.031
skeletal system morphogenesis GO:0048705 102 0.031
response to glucocorticoid GO:0051384 1 0.030
notochord morphogenesis GO:0048570 17 0.030
response to external stimulus GO:0009605 264 0.030
regulation of protein targeting GO:1903533 2 0.030
response to wounding GO:0009611 116 0.029
regulation of biosynthetic process GO:0009889 250 0.029
dopamine biosynthetic process GO:0042416 2 0.028
heart looping GO:0001947 94 0.028
nucleocytoplasmic transport GO:0006913 4 0.028
embryo development ending in birth or egg hatching GO:0009792 271 0.028
system process GO:0003008 185 0.028
cell projection morphogenesis GO:0048858 244 0.028
cell part morphogenesis GO:0032990 246 0.027
protein secretion GO:0009306 1 0.027
nuclear transport GO:0051169 4 0.027
rna metabolic process GO:0016070 219 0.027
regulation of protein localization to nucleus GO:1900180 2 0.027
response to metal ion GO:0010038 34 0.027
cell projection organization GO:0030030 284 0.027
regulation of gene expression GO:0010468 265 0.027
fat soluble vitamin metabolic process GO:0006775 4 0.027
erk1 and erk2 cascade GO:0070371 4 0.026
multicellular organismal response to stress GO:0033555 2 0.026
cell morphogenesis GO:0000902 289 0.026
regulation of metabolic process GO:0019222 359 0.026
cellular component biogenesis GO:0044085 178 0.026
response to endogenous stimulus GO:0009719 83 0.026
single organism organelle organization GO:1902589 199 0.026
cellular response to chemical stimulus GO:0070887 157 0.026
cell morphogenesis involved in differentiation GO:0000904 195 0.026
response to stress GO:0006950 263 0.025
energy reserve metabolic process GO:0006112 2 0.025
regulation of cellular amino acid metabolic process GO:0006521 0 0.025
single organism nuclear import GO:1902593 3 0.025
camera type eye development GO:0043010 222 0.025
pancreas development GO:0031016 84 0.025
carbohydrate biosynthetic process GO:0016051 1 0.025
catechol containing compound metabolic process GO:0009712 2 0.024
regulation of cellular amine metabolic process GO:0033238 0 0.024
enzyme linked receptor protein signaling pathway GO:0007167 106 0.024
visual perception GO:0007601 17 0.024
oxoacid metabolic process GO:0043436 31 0.023
organic substance biosynthetic process GO:1901576 289 0.023
cellular amino acid metabolic process GO:0006520 7 0.023
nuclear import GO:0051170 3 0.023
cytoskeleton organization GO:0007010 96 0.023
regulation of nucleocytoplasmic transport GO:0046822 2 0.022
cellular response to external stimulus GO:0071496 2 0.022
regeneration GO:0031099 91 0.022
regulation of cell killing GO:0031341 2 0.022
response to chemical GO:0042221 320 0.022
behavior GO:0007610 74 0.022
cellular component movement GO:0006928 335 0.022
regulation of stem cell differentiation GO:2000736 4 0.022
cilium assembly GO:0042384 58 0.022
striated muscle cell differentiation GO:0051146 129 0.021
stem cell differentiation GO:0048863 117 0.021
mesenchymal cell proliferation GO:0010463 1 0.021
aromatic compound biosynthetic process GO:0019438 217 0.021
positive regulation of stress activated mapk cascade GO:0032874 3 0.021
segmentation GO:0035282 97 0.021
chemosensory behavior GO:0007635 1 0.021
protein import GO:0017038 3 0.021
aging GO:0007568 2 0.021
wound healing GO:0042060 90 0.020
regulation of immune system process GO:0002682 34 0.020
lateral inhibition GO:0046331 1 0.020
positive regulation of cell cycle GO:0045787 3 0.020
regulation of cellular ketone metabolic process GO:0010565 7 0.020
regulation of wound healing GO:0061041 2 0.020
organic acid metabolic process GO:0006082 31 0.020
cellular response to nutrient levels GO:0031669 2 0.020
mononuclear cell proliferation GO:0032943 1 0.020
regulation of protein import into nucleus GO:0042306 2 0.020
growth plate cartilage development GO:0003417 2 0.020
multi organism process GO:0051704 134 0.019
protein import into nucleus GO:0006606 3 0.019
positive regulation of cell killing GO:0031343 2 0.019
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.019
coagulation GO:0050817 13 0.019
forebrain development GO:0030900 96 0.019
single fertilization GO:0007338 3 0.019
regulation of erk1 and erk2 cascade GO:0070372 4 0.019
head development GO:0060322 303 0.019
peptidyl threonine phosphorylation GO:0018107 1 0.019
phagocytosis GO:0006909 3 0.019
response to nutrient GO:0007584 3 0.019
convergent extension involved in gastrulation GO:0060027 71 0.019
positive regulation of cellular component biogenesis GO:0044089 3 0.018
response to biotic stimulus GO:0009607 97 0.018
vitamin a metabolic process GO:0006776 1 0.018
negative regulation of protein transport GO:0051224 3 0.018
regulation of response to stimulus GO:0048583 269 0.018
regulation of reactive oxygen species metabolic process GO:2000377 2 0.018
pigmentation GO:0043473 85 0.018
regulation of bmp signaling pathway GO:0030510 39 0.018
chemical homeostasis GO:0048878 49 0.018
positive regulation of protein polymerization GO:0032273 2 0.018
anterior posterior pattern specification GO:0009952 152 0.018
biosynthetic process GO:0009058 294 0.018
microtubule organizing center organization GO:0031023 1 0.018
oocyte maturation GO:0001556 4 0.017
cell killing GO:0001906 2 0.017
heart contraction GO:0060047 71 0.017
cell projection assembly GO:0030031 64 0.017
mitochondrion organization GO:0007005 4 0.017
negative regulation of protein phosphorylation GO:0001933 4 0.017
carboxylic acid metabolic process GO:0019752 22 0.017
regulation of nucleic acid templated transcription GO:1903506 213 0.017
protein dephosphorylation GO:0006470 3 0.017
cellular ketone metabolic process GO:0042180 11 0.017
cellular nitrogen compound metabolic process GO:0034641 290 0.017
homeostatic process GO:0042592 142 0.016
response to carbohydrate GO:0009743 3 0.016
negative regulation of biological process GO:0048519 304 0.016
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.016
death GO:0016265 121 0.016
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.016
epithelial tube morphogenesis GO:0060562 148 0.016
regulation of carbohydrate biosynthetic process GO:0043255 1 0.016
positive regulation of cellular amine metabolic process GO:0033240 0 0.016
regulation of blood coagulation GO:0030193 1 0.016
positive regulation of cellular metabolic process GO:0031325 94 0.016
ventricular cardiac muscle tissue morphogenesis GO:0055010 2 0.016
regulation of cellular metabolic process GO:0031323 320 0.016
fin regeneration GO:0031101 51 0.015
regulation of cytoplasmic transport GO:1903649 4 0.015
connective tissue development GO:0061448 99 0.015
regulation of synapse organization GO:0050807 3 0.015
small molecule metabolic process GO:0044281 77 0.015
positive regulation of transport GO:0051050 2 0.015
female sex differentiation GO:0046660 4 0.015
appendage morphogenesis GO:0035107 56 0.015
fertilization GO:0009566 3 0.015
phosphorus metabolic process GO:0006793 109 0.015
developmental programmed cell death GO:0010623 4 0.015
protein metabolic process GO:0019538 183 0.015
lymphocyte proliferation GO:0046651 1 0.015
striated muscle cell development GO:0055002 108 0.015
cartilage condensation GO:0001502 3 0.015
regulation of primary metabolic process GO:0080090 311 0.015
bone remodeling GO:0046849 2 0.015
organic cyclic compound metabolic process GO:1901360 301 0.015
eye morphogenesis GO:0048592 144 0.015
inner ear development GO:0048839 126 0.014
regulation of microtubule cytoskeleton organization GO:0070507 3 0.014
modification dependent protein catabolic process GO:0019941 3 0.014
regulation of protein ubiquitination GO:0031396 3 0.014
peptidyl threonine modification GO:0018210 1 0.014
extracellular structure organization GO:0043062 27 0.014
single organism localization GO:1902578 225 0.014
regulation of multicellular organism growth GO:0040014 4 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
cellular protein metabolic process GO:0044267 129 0.014
modification dependent macromolecule catabolic process GO:0043632 3 0.014
single organism metabolic process GO:0044710 217 0.014
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
regulation of macromolecule metabolic process GO:0060255 317 0.014
localization of cell GO:0051674 244 0.014
multicellular organismal metabolic process GO:0044236 2 0.014
proteasomal protein catabolic process GO:0010498 2 0.014
negative regulation of cellular catabolic process GO:0031330 3 0.014
establishment of localization GO:0051234 244 0.013
retina homeostasis GO:0001895 12 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
cellular response to organic substance GO:0071310 105 0.013
protein kinase b signaling GO:0043491 9 0.013
cellular protein modification process GO:0006464 100 0.013
eye photoreceptor cell differentiation GO:0001754 45 0.013
nitrogen compound metabolic process GO:0006807 319 0.013
nucleobase containing compound metabolic process GO:0006139 274 0.013
regulation of rho protein signal transduction GO:0035023 2 0.013
regulation of carbohydrate metabolic process GO:0006109 4 0.013
cognition GO:0050890 1 0.013
response to monosaccharide GO:0034284 3 0.013
cellular transition metal ion homeostasis GO:0046916 3 0.013
hematopoietic stem cell differentiation GO:0060218 20 0.013
regulation of leukocyte mediated cytotoxicity GO:0001910 1 0.013
multicellular organism growth GO:0035264 4 0.012
regulation of protein modification process GO:0031399 29 0.012
regulation of protein complex assembly GO:0043254 3 0.012
chemotaxis GO:0006935 104 0.012
bmp signaling pathway GO:0030509 52 0.012
extracellular matrix organization GO:0030198 27 0.012
positive regulation of catabolic process GO:0009896 4 0.012
chondrocyte development GO:0002063 4 0.012
guanosine containing compound catabolic process GO:1901069 2 0.012
tissue regeneration GO:0042246 74 0.012
ion homeostasis GO:0050801 41 0.012
production of molecular mediator of immune response GO:0002440 2 0.012
endocrine system development GO:0035270 65 0.012
catecholamine metabolic process GO:0006584 2 0.012
positive regulation of immune effector process GO:0002699 3 0.012
negative regulation of mapk cascade GO:0043409 4 0.012
hormone biosynthetic process GO:0042446 3 0.012
cellular response to starvation GO:0009267 1 0.012
positive regulation of cell division GO:0051781 2 0.012
adult behavior GO:0030534 2 0.012
ubiquitin dependent protein catabolic process GO:0006511 3 0.012
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.012
regulation of protein transport GO:0051223 3 0.012
nuclear migration GO:0007097 3 0.012
regulation of behavior GO:0050795 24 0.012
negative regulation of cell death GO:0060548 60 0.012
phosphate containing compound metabolic process GO:0006796 108 0.012
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.012
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.012
negative regulation of striated muscle tissue development GO:0045843 2 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
establishment of melanosome localization GO:0032401 19 0.011
embryonic pectoral fin morphogenesis GO:0035118 24 0.011
actin cytoskeleton organization GO:0030036 63 0.011
cilium organization GO:0044782 71 0.011
phagocytosis engulfment GO:0006911 1 0.011
establishment of vesicle localization GO:0051650 24 0.011
fibroblast growth factor receptor signaling pathway GO:0008543 22 0.011
secondary metabolic process GO:0019748 3 0.011
positive regulation of cytoskeleton organization GO:0051495 3 0.011
transcription dna templated GO:0006351 181 0.011
organonitrogen compound metabolic process GO:1901564 74 0.011
regulation of programmed cell death GO:0043067 101 0.011
response to other organism GO:0051707 97 0.011
alcohol metabolic process GO:0006066 11 0.011
diterpenoid metabolic process GO:0016101 15 0.011
regulation of macromolecule biosynthetic process GO:0010556 225 0.011
hemostasis GO:0007599 13 0.011
cellular hormone metabolic process GO:0034754 19 0.011
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.011
brain development GO:0007420 293 0.011
regulation of inflammatory response GO:0050727 2 0.011
nucleic acid templated transcription GO:0097659 181 0.011
centrosome organization GO:0051297 1 0.011
membrane hyperpolarization GO:0060081 1 0.011
regulation of transcription dna templated GO:0006355 213 0.011
regulation of cell development GO:0060284 100 0.011
muscle cell development GO:0055001 115 0.011
cellular protein complex assembly GO:0043623 19 0.011
internal peptidyl lysine acetylation GO:0018393 2 0.011
regulation of molecular function GO:0065009 70 0.011
exocytosis GO:0006887 1 0.010
alcohol biosynthetic process GO:0046165 2 0.010
tissue remodeling GO:0048771 4 0.010
negative regulation of cytoplasmic transport GO:1903650 2 0.010
mesenchyme development GO:0060485 127 0.010
membrane invagination GO:0010324 1 0.010
regulation of receptor activity GO:0010469 2 0.010
regulation of localization GO:0032879 104 0.010
regulation of nervous system development GO:0051960 90 0.010
signal transduction downstream of smoothened GO:0007227 1 0.010
cellular protein catabolic process GO:0044257 4 0.010
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.010
cation homeostasis GO:0055080 33 0.010

col5a3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.038
musculoskeletal system disease DOID:17 0 0.038
retinal disease DOID:5679 0 0.018
sensory system disease DOID:0050155 0 0.018
eye and adnexa disease DOID:1492 0 0.018
nervous system disease DOID:863 0 0.018
eye disease DOID:5614 0 0.018
myopathy DOID:423 0 0.012
muscular disease DOID:0080000 0 0.012
heart disease DOID:114 0 0.012
cardiomyopathy DOID:0050700 0 0.012
intrinsic cardiomyopathy DOID:0060036 0 0.012
cardiovascular system disease DOID:1287 0 0.012
muscle tissue disease DOID:66 0 0.012
disease of metabolism DOID:0014667 0 0.010