Danio rerio

0 known processes

srsf4

serine/arginine-rich splicing factor 4

(Aliases: sfrs4,zgc:55809,wu:fb37e02,zgc:152957,wu:fj35e06)

srsf4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
alternative mrna splicing via spliceosome GO:0000380 1 0.508
regulation of mrna splicing via spliceosome GO:0048024 3 0.487
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.411
gene expression GO:0010467 252 0.390
regulation of mrna processing GO:0050684 3 0.369
regulation of nitrogen compound metabolic process GO:0051171 251 0.333
nucleobase containing compound metabolic process GO:0006139 274 0.314
regulation of rna metabolic process GO:0051252 224 0.283
biosynthetic process GO:0009058 294 0.276
rna stabilization GO:0043489 4 0.237
regulation of cell shape GO:0008360 1 0.229
cellular macromolecule metabolic process GO:0044260 391 0.225
regulation of metabolic process GO:0019222 359 0.210
regulation of mrna metabolic process GO:1903311 6 0.198
cellular macromolecule biosynthetic process GO:0034645 224 0.191
regulation of transcription dna templated GO:0006355 213 0.167
nucleic acid metabolic process GO:0090304 244 0.164
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.160
heterocycle metabolic process GO:0046483 290 0.158
organic cyclic compound metabolic process GO:1901360 301 0.156
nitrogen compound metabolic process GO:0006807 319 0.155
larval development GO:0002164 2 0.147
regulation of gene expression GO:0010468 265 0.139
negative regulation of neuron projection regeneration GO:0070571 4 0.133
transcription dna templated GO:0006351 181 0.130
nucleic acid templated transcription GO:0097659 181 0.129
meiotic nuclear division GO:0007126 4 0.125
macromolecule biosynthetic process GO:0009059 227 0.124
rna metabolic process GO:0016070 219 0.123
cellular aromatic compound metabolic process GO:0006725 295 0.122
aromatic compound biosynthetic process GO:0019438 217 0.122
rna biosynthetic process GO:0032774 181 0.115
regulation of macromolecule metabolic process GO:0060255 317 0.113
regulation of primary metabolic process GO:0080090 311 0.111
cellular biosynthetic process GO:0044249 286 0.108
growth GO:0040007 174 0.105
negative regulation of metabolic process GO:0009892 86 0.099
negative regulation of biological process GO:0048519 304 0.096
rna splicing GO:0008380 16 0.093
regulation of developmental process GO:0050793 247 0.090
cellular nitrogen compound metabolic process GO:0034641 290 0.090
spliceosomal complex assembly GO:0000245 1 0.085
regulation of macromolecule biosynthetic process GO:0010556 225 0.084
adult behavior GO:0030534 2 0.082
cellular nitrogen compound biosynthetic process GO:0044271 218 0.081
regulation of nucleic acid templated transcription GO:1903506 213 0.079
regulation of cellular biosynthetic process GO:0031326 245 0.075
regulation of multicellular organism growth GO:0040014 4 0.072
nucleobase containing compound biosynthetic process GO:0034654 205 0.069
regulation of cellular metabolic process GO:0031323 320 0.066
rna splicing via transesterification reactions GO:0000375 10 0.066
response to chemical GO:0042221 320 0.064
positive regulation of cellular component biogenesis GO:0044089 3 0.063
regulation of gene expression epigenetic GO:0040029 11 0.063
organic cyclic compound biosynthetic process GO:1901362 223 0.062
positive regulation of gene expression GO:0010628 71 0.060
mrna splicing via spliceosome GO:0000398 10 0.059
cellular component assembly GO:0022607 170 0.058
positive regulation of transport GO:0051050 2 0.058
multicellular organism growth GO:0035264 4 0.056
regulation of meiotic cell cycle GO:0051445 1 0.056
mrna processing GO:0006397 14 0.054
multi organism cellular process GO:0044764 2 0.053
organic substance biosynthetic process GO:1901576 289 0.053
cell projection organization GO:0030030 284 0.052
mrna metabolic process GO:0016071 20 0.051
aging GO:0007568 2 0.049
meiotic cell cycle process GO:1903046 3 0.048
rna localization GO:0006403 4 0.046
single organism localization GO:1902578 225 0.045
single organism metabolic process GO:0044710 217 0.045
regulation of multicellular organismal process GO:0051239 277 0.045
positive regulation of nucleic acid templated transcription GO:1903508 57 0.044
regulation of rna biosynthetic process GO:2001141 213 0.044
negative regulation of dna metabolic process GO:0051053 4 0.044
cellular protein catabolic process GO:0044257 4 0.044
modification dependent macromolecule catabolic process GO:0043632 3 0.043
negative regulation of cellular process GO:0048523 283 0.042
positive regulation of metabolic process GO:0009893 108 0.041
positive regulation of rna metabolic process GO:0051254 59 0.041
heterocycle biosynthetic process GO:0018130 215 0.041
negative regulation of axon regeneration GO:0048681 4 0.040
negative regulation of ras protein signal transduction GO:0046580 1 0.040
protein complex disassembly GO:0043241 1 0.040
positive regulation of cellular process GO:0048522 201 0.040
regulation of calcium ion dependent exocytosis GO:0017158 1 0.039
cytoskeleton organization GO:0007010 96 0.039
3 utr mediated mrna stabilization GO:0070935 3 0.039
dna templated transcription elongation GO:0006354 3 0.038
meiotic chromosome segregation GO:0045132 3 0.037
regulation of nucleocytoplasmic transport GO:0046822 2 0.037
regulation of reproductive process GO:2000241 4 0.037
regulation of cellular component organization GO:0051128 86 0.037
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.036
protein metabolic process GO:0019538 183 0.036
regulation of rna splicing GO:0043484 8 0.036
positive regulation of cellular biosynthetic process GO:0031328 68 0.034
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.034
negative regulation of gene expression GO:0010629 65 0.034
negative regulation of rna splicing GO:0033119 1 0.033
organelle organization GO:0006996 227 0.033
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.032
cellular component morphogenesis GO:0032989 336 0.032
regulation of chromosome segregation GO:0051983 1 0.032
regulation of growth rate GO:0040009 1 0.032
rna export from nucleus GO:0006405 1 0.032
negative regulation of dna replication GO:0008156 2 0.031
cell morphogenesis GO:0000902 289 0.031
regulation of stem cell differentiation GO:2000736 4 0.030
regulation of circadian rhythm GO:0042752 4 0.029
gene silencing GO:0016458 4 0.029
intracellular signal transduction GO:0035556 85 0.028
cellular component disassembly GO:0022411 1 0.028
nucleocytoplasmic transport GO:0006913 4 0.028
regulation of mrna stability GO:0043488 4 0.027
positive regulation of biological process GO:0048518 253 0.027
response to stress GO:0006950 263 0.027
macromolecule localization GO:0033036 54 0.026
mrna export from nucleus GO:0006406 1 0.026
transport GO:0006810 220 0.026
embryo development ending in birth or egg hatching GO:0009792 271 0.025
negative regulation of catabolic process GO:0009895 3 0.025
single organism reproductive process GO:0044702 40 0.025
compound eye development GO:0048749 2 0.025
dorsal ventral pattern formation GO:0009953 125 0.025
regulation of protein complex assembly GO:0043254 3 0.024
intracellular mrna localization GO:0008298 1 0.024
maintenance of location GO:0051235 4 0.024
regulation of cytoplasmic transport GO:1903649 4 0.024
response to cold GO:0009409 4 0.024
response to drug GO:0042493 3 0.024
muscle structure development GO:0061061 196 0.023
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.023
cellular component biogenesis GO:0044085 178 0.023
central nervous system development GO:0007417 387 0.023
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.023
sex determination GO:0007530 1 0.023
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.022
pole plasm assembly GO:0007315 4 0.022
protein import into nucleus GO:0006606 3 0.022
regulation of signaling GO:0023051 235 0.021
response to biotic stimulus GO:0009607 97 0.021
gene silencing by rna GO:0031047 4 0.021
locomotion GO:0040011 313 0.021
regulation of protein import into nucleus GO:0042306 2 0.021
response to wounding GO:0009611 116 0.021
negative regulation of cellular biosynthetic process GO:0031327 55 0.021
regulation of biosynthetic process GO:0009889 250 0.021
mrna stabilization GO:0048255 4 0.020
cellular protein metabolic process GO:0044267 129 0.020
blood vessel development GO:0001568 246 0.020
developmental growth GO:0048589 166 0.020
transcription from rna polymerase ii promoter GO:0006366 80 0.020
regulation of anatomical structure morphogenesis GO:0022603 130 0.020
developmental process involved in reproduction GO:0003006 27 0.019
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.019
negative regulation of biosynthetic process GO:0009890 55 0.019
stem cell differentiation GO:0048863 117 0.019
negative regulation of cell differentiation GO:0045596 46 0.019
positive regulation of muscle cell differentiation GO:0051149 1 0.019
negative regulation of neuron projection development GO:0010977 9 0.019
female gonad development GO:0008585 4 0.019
regulation of oxidative stress induced intrinsic apoptotic signaling pathway GO:1902175 2 0.019
single organism organelle organization GO:1902589 199 0.019
regionalization GO:0003002 274 0.019
regulation of cellular amine metabolic process GO:0033238 0 0.019
interspecies interaction between organisms GO:0044419 4 0.019
response to external stimulus GO:0009605 264 0.018
regulation of cellular response to oxidative stress GO:1900407 2 0.018
positive regulation of translation GO:0045727 1 0.018
generation of neurons GO:0048699 385 0.018
positive regulation of cell cycle GO:0045787 3 0.018
nuclear export GO:0051168 1 0.018
regulation of cell cycle GO:0051726 52 0.018
regulation of anterior head development GO:2000742 2 0.018
regulation of biological quality GO:0065008 263 0.017
regulation of dna replication GO:0006275 3 0.017
positive regulation of reproductive process GO:2000243 2 0.017
dna methylation or demethylation GO:0044728 8 0.017
regulation of intracellular protein transport GO:0033157 3 0.017
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.017
positive regulation of rna biosynthetic process GO:1902680 57 0.017
response to external biotic stimulus GO:0043207 97 0.017
dna metabolic process GO:0006259 27 0.017
negative regulation of cellular metabolic process GO:0031324 77 0.017
regulation of protein transport GO:0051223 3 0.016
regulation of dna templated transcription elongation GO:0032784 3 0.016
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.016
cell matrix adhesion GO:0007160 4 0.016
development of primary female sexual characteristics GO:0046545 4 0.015
regulation of protein catabolic process GO:0042176 1 0.015
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.015
gamete generation GO:0007276 33 0.015
axon development GO:0061564 166 0.015
epidermis development GO:0008544 48 0.015
maternal determination of anterior posterior axis embryo GO:0008358 4 0.015
negative regulation of macromolecule metabolic process GO:0010605 76 0.015
phagocytosis GO:0006909 3 0.015
regulation of cell differentiation GO:0045595 142 0.015
nuclear transport GO:0051169 4 0.015
amine metabolic process GO:0009308 2 0.015
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.015
positive regulation of cytokine production GO:0001819 2 0.015
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.015
nucleic acid transport GO:0050657 2 0.015
mrna 3 end processing GO:0031124 2 0.015
mitotic metaphase plate congression GO:0007080 1 0.015
single organism transport GO:0044765 206 0.015
regulation of multicellular organismal development GO:2000026 223 0.014
protein k63 linked ubiquitination GO:0070534 2 0.014
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.014
adherens junction assembly GO:0034333 1 0.014
positive regulation of biosynthetic process GO:0009891 68 0.014
positive regulation of cellular amine metabolic process GO:0033240 0 0.014
regulation of response to stimulus GO:0048583 269 0.014
regulation of cellular amino acid metabolic process GO:0006521 0 0.014
regeneration GO:0031099 91 0.014
regulation of cell communication GO:0010646 232 0.014
protein localization to nucleus GO:0034504 3 0.014
anterior head development GO:0097065 2 0.014
establishment of localization in cell GO:0051649 77 0.014
positive regulation of cellular carbohydrate metabolic process GO:0010676 1 0.014
head development GO:0060322 303 0.014
rna transport GO:0050658 2 0.014
regulation of synapse assembly GO:0051963 3 0.014
protein stabilization GO:0050821 2 0.014
establishment of localization GO:0051234 244 0.014
reproduction GO:0000003 40 0.014
neuron projection development GO:0031175 180 0.014
stem cell maintenance GO:0019827 4 0.014
intrinsic apoptotic signaling pathway in response to oxidative stress GO:0008631 2 0.013
negative regulation of rna metabolic process GO:0051253 48 0.013
multi organism process GO:0051704 134 0.013
regulation of neurogenesis GO:0050767 87 0.013
muscle tissue development GO:0060537 110 0.013
positive regulation of secretion by cell GO:1903532 1 0.013
response to uv GO:0009411 3 0.013
organonitrogen compound metabolic process GO:1901564 74 0.013
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.013
brain development GO:0007420 293 0.013
regulation of neuron differentiation GO:0045664 56 0.013
cellular amine metabolic process GO:0044106 2 0.013
regulation of tube size GO:0035150 2 0.012
regulation of cell death GO:0010941 103 0.012
modification of morphology or physiology of other organism GO:0035821 4 0.012
positive regulation of multicellular organismal process GO:0051240 52 0.012
carboxylic acid metabolic process GO:0019752 22 0.012
macromolecule deacylation GO:0098732 3 0.012
mitotic nuclear division GO:0007067 18 0.012
ubiquitin dependent protein catabolic process GO:0006511 3 0.012
cytokinesis GO:0000910 3 0.012
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.012
negative regulation of cell projection organization GO:0031345 9 0.012
negative regulation of cellular catabolic process GO:0031330 3 0.012
immune system process GO:0002376 241 0.012
negative regulation of response to stimulus GO:0048585 104 0.012
negative regulation of multi organism process GO:0043901 3 0.012
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.012
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.012
nuclear pore organization GO:0006999 2 0.012
regulation of localization GO:0032879 104 0.012
reproductive process GO:0022414 40 0.012
cell cycle GO:0007049 93 0.012
positive regulation of cell activation GO:0050867 1 0.012
regulation of cell morphogenesis GO:0022604 42 0.011
regulation of binding GO:0051098 3 0.011
positive regulation of cellular metabolic process GO:0031325 94 0.011
regulation of circadian sleep wake cycle sleep GO:0045187 1 0.011
regulation of cell activation GO:0050865 1 0.011
modification of morphology or physiology of other organism involved in symbiotic interaction GO:0051817 4 0.011
positive regulation of cell adhesion GO:0045785 1 0.011
positive regulation of transcription from rna polymerase ii promoter GO:0045944 22 0.011
positive regulation of cellular catabolic process GO:0031331 3 0.011
regulation of organelle organization GO:0033043 29 0.011
single organism nuclear import GO:1902593 3 0.011
nuclear import GO:0051170 3 0.011
regulation of cellular protein catabolic process GO:1903362 1 0.011
cell projection morphogenesis GO:0048858 244 0.011
striated muscle tissue development GO:0014706 110 0.011
methylation GO:0032259 22 0.011
synaptic growth at neuromuscular junction GO:0051124 2 0.011
establishment of rna localization GO:0051236 3 0.011
macromolecular complex disassembly GO:0032984 1 0.011
neural tube patterning GO:0021532 33 0.011
system process GO:0003008 185 0.011
small molecule metabolic process GO:0044281 77 0.011
mitotic dna integrity checkpoint GO:0044774 4 0.011
mrna transport GO:0051028 2 0.010
mitotic g2 dna damage checkpoint GO:0007095 3 0.010
telomere organization GO:0032200 1 0.010
translational initiation GO:0006413 3 0.010
g2 dna damage checkpoint GO:0031572 3 0.010
positive regulation of carbohydrate metabolic process GO:0045913 1 0.010
localization of cell GO:0051674 244 0.010
embryonic limb morphogenesis GO:0030326 2 0.010
posttranscriptional gene silencing by rna GO:0035194 3 0.010
regulation of protein localization to nucleus GO:1900180 2 0.010
intestinal epithelial structure maintenance GO:0060729 7 0.010
lateral inhibition GO:0046331 1 0.010

srsf4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.024
cancer DOID:162 0 0.021
disease of cellular proliferation DOID:14566 0 0.021
myopathy DOID:423 0 0.018
muscular disease DOID:0080000 0 0.018
musculoskeletal system disease DOID:17 0 0.018
muscle tissue disease DOID:66 0 0.018
organ system cancer DOID:0050686 0 0.011