Danio rerio

0 known processes

prpf39

PRP39 pre-mRNA processing factor 39 homolog (yeast)

(Aliases: si:dz261o22.3,wu:fa10d07,fa10d07)

prpf39 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of mrna processing GO:0050684 3 0.552
embryo development ending in birth or egg hatching GO:0009792 271 0.393
Worm
gene expression GO:0010467 252 0.374
larval development GO:0002164 2 0.363
alternative mrna splicing via spliceosome GO:0000380 1 0.325
cellular macromolecule metabolic process GO:0044260 391 0.290
rna splicing GO:0008380 16 0.289
rna processing GO:0006396 25 0.241
regulation of mrna splicing via spliceosome GO:0048024 3 0.175
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.159
regulation of nitrogen compound metabolic process GO:0051171 251 0.129
nuclear import GO:0051170 3 0.127
mrna metabolic process GO:0016071 20 0.126
mrna processing GO:0006397 14 0.109
protein localization to nucleus GO:0034504 3 0.095
regulation of nucleocytoplasmic transport GO:0046822 2 0.085
multicellular organism growth GO:0035264 4 0.083
cellular biosynthetic process GO:0044249 286 0.082
meiotic nuclear division GO:0007126 4 0.080
negative regulation of mrna metabolic process GO:1903312 3 0.078
nuclear transport GO:0051169 4 0.072
protein import GO:0017038 3 0.068
biosynthetic process GO:0009058 294 0.068
response to chemical GO:0042221 320 0.068
response to monosaccharide GO:0034284 3 0.067
response to carbohydrate GO:0009743 3 0.064
rna polyadenylation GO:0043631 2 0.063
organism emergence from protective structure GO:0071684 4 0.060
regulation of macromolecule metabolic process GO:0060255 317 0.060
single organism nuclear import GO:1902593 3 0.059
establishment of protein localization to organelle GO:0072594 4 0.058
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.058
mrna polyadenylation GO:0006378 2 0.057
regulation of multicellular organism growth GO:0040014 4 0.053
cell death GO:0008219 121 0.052
negative regulation of cellular process GO:0048523 283 0.052
nucleocytoplasmic transport GO:0006913 4 0.051
lipid storage GO:0019915 1 0.045
heterocycle metabolic process GO:0046483 290 0.044
multi organism process GO:0051704 134 0.044
Worm
regulation of signal transduction GO:0009966 225 0.044
rna localization GO:0006403 4 0.044
aging GO:0007568 2 0.043
regulation of cytoplasmic transport GO:1903649 4 0.043
erk1 and erk2 cascade GO:0070371 4 0.043
rna metabolic process GO:0016070 219 0.043
regulation of developmental process GO:0050793 247 0.042
positive regulation of transport GO:0051050 2 0.042
protein import into nucleus GO:0006606 3 0.041
locomotor rhythm GO:0045475 3 0.041
locomotion GO:0040011 313 0.041
regulation of dna templated transcription in response to stress GO:0043620 0 0.039
multi organism reproductive process GO:0044703 36 0.039
Worm
localization of cell GO:0051674 244 0.039
protein targeting to nucleus GO:0044744 3 0.038
establishment of localization GO:0051234 244 0.038
mrna splicing via spliceosome GO:0000398 10 0.038
mitotic cell cycle GO:0000278 64 0.035
organic cyclic compound metabolic process GO:1901360 301 0.035
nuclear export GO:0051168 1 0.035
cellular aromatic compound metabolic process GO:0006725 295 0.034
response to hexose GO:0009746 3 0.033
macromolecule biosynthetic process GO:0009059 227 0.033
gamete generation GO:0007276 33 0.033
Worm
regulation of epithelial cell proliferation GO:0050678 3 0.033
death GO:0016265 121 0.033
hatching GO:0035188 4 0.033
release of sequestered calcium ion into cytosol GO:0051209 3 0.032
regulation of metabolic process GO:0019222 359 0.032
single organism organelle organization GO:1902589 199 0.032
negative regulation of biological process GO:0048519 304 0.032
cellular nitrogen compound biosynthetic process GO:0044271 218 0.031
nucleic acid metabolic process GO:0090304 244 0.031
ribonucleoprotein complex biogenesis GO:0022613 13 0.031
compound eye development GO:0048749 2 0.031
single organism localization GO:1902578 225 0.031
regulation of protein catabolic process GO:0042176 1 0.030
synaptic growth at neuromuscular junction GO:0051124 2 0.030
eye development GO:0001654 277 0.030
multicellular organismal reproductive process GO:0048609 35 0.030
Worm
spliceosomal complex assembly GO:0000245 1 0.030
nitrogen compound metabolic process GO:0006807 319 0.029
establishment of rna localization GO:0051236 3 0.029
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.029
regulation of response to stimulus GO:0048583 269 0.028
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.028
single organism metabolic process GO:0044710 217 0.028
regulation of primary metabolic process GO:0080090 311 0.028
stem cell proliferation GO:0072089 4 0.027
heterocycle biosynthetic process GO:0018130 215 0.027
sequestering of metal ion GO:0051238 3 0.027
nucleobase containing compound metabolic process GO:0006139 274 0.027
cell cycle GO:0007049 93 0.027
positive regulation of rna splicing GO:0033120 1 0.026
regulation of signaling GO:0023051 235 0.026
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.026
chordate embryonic development GO:0043009 271 0.026
translation GO:0006412 5 0.026
organic substance transport GO:0071702 58 0.026
phosphate containing compound metabolic process GO:0006796 108 0.026
nuclear division GO:0000280 23 0.026
maintenance of location GO:0051235 4 0.026
regulation of cell communication GO:0010646 232 0.025
cellular component biogenesis GO:0044085 178 0.025
regulation of mrna metabolic process GO:1903311 6 0.025
signal transduction GO:0007165 455 0.025
ubiquitin dependent protein catabolic process GO:0006511 3 0.025
cellular component assembly GO:0022607 170 0.024
positive regulation of biological process GO:0048518 253 0.024
regulation of erk1 and erk2 cascade GO:0070372 4 0.024
cellular protein metabolic process GO:0044267 129 0.024
nucleic acid transport GO:0050657 2 0.024
negative regulation of mrna splicing via spliceosome GO:0048025 1 0.024
transport GO:0006810 220 0.024
regulation of meiotic cell cycle GO:0051445 1 0.023
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.023
macromolecule localization GO:0033036 54 0.023
sensory organ development GO:0007423 393 0.023
regulation of gene expression GO:0010468 265 0.023
embryonic organ development GO:0048568 381 0.023
organic substance biosynthetic process GO:1901576 289 0.022
regulation of establishment of protein localization GO:0070201 4 0.022
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.022
cellular nitrogen compound metabolic process GO:0034641 290 0.022
cellular component movement GO:0006928 335 0.022
positive regulation of catabolic process GO:0009896 4 0.022
reproduction GO:0000003 40 0.022
Worm
cellular macromolecule biosynthetic process GO:0034645 224 0.022
regulation of multicellular organismal development GO:2000026 223 0.022
cellular localization GO:0051641 97 0.021
organic cyclic compound biosynthetic process GO:1901362 223 0.021
phosphorus metabolic process GO:0006793 109 0.021
negative regulation of mitosis GO:0045839 3 0.021
growth GO:0040007 174 0.020
regulation of protein localization to nucleus GO:1900180 2 0.020
glucose homeostasis GO:0042593 1 0.020
regulation of protein transport GO:0051223 3 0.020
single organism transport GO:0044765 206 0.020
cellular response to nutrient levels GO:0031669 2 0.020
regulation of intracellular protein transport GO:0033157 3 0.020
regulation of cellular metabolic process GO:0031323 320 0.020
negative regulation of mrna processing GO:0050686 1 0.020
positive regulation of cell communication GO:0010647 56 0.019
regulation of synapse assembly GO:0051963 3 0.019
interspecies interaction between organisms GO:0044419 4 0.019
transcription from rna polymerase ii promoter GO:0006366 80 0.019
reproductive process GO:0022414 40 0.019
Worm
modification dependent protein catabolic process GO:0019941 3 0.018
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.018
negative regulation of rna splicing GO:0033119 1 0.018
regulation of transcription from rna polymerase iii promoter GO:0006359 1 0.018
programmed cell death GO:0012501 119 0.018
positive regulation of cellular component biogenesis GO:0044089 3 0.018
larval behavior GO:0030537 5 0.018
developmental growth GO:0048589 166 0.018
organelle organization GO:0006996 227 0.018
germ cell development GO:0007281 22 0.018
Worm
response to glucose GO:0009749 3 0.018
regulation of cysteine type endopeptidase activity involved in apoptotic process GO:0043281 20 0.017
regulation of synapse organization GO:0050807 3 0.017
oocyte anterior posterior axis specification GO:0007314 4 0.017
regulation of cell death GO:0010941 103 0.017
regulation of translational initiation GO:0006446 1 0.017
camera type eye development GO:0043010 222 0.017
protein metabolic process GO:0019538 183 0.017
regulation of wound healing GO:0061041 2 0.017
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.017
single fertilization GO:0007338 3 0.016
cellular response to extracellular stimulus GO:0031668 2 0.016
positive regulation of cellular process GO:0048522 201 0.016
cognition GO:0050890 1 0.016
rna transport GO:0050658 2 0.016
amine metabolic process GO:0009308 2 0.016
primary neural tube formation GO:0014020 1 0.016
gtp catabolic process GO:0006184 2 0.016
cellular response to chemical stimulus GO:0070887 157 0.015
cell cycle process GO:0022402 53 0.015
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.015
Worm
regulation of rna metabolic process GO:0051252 224 0.015
i kappab kinase nf kappab signaling GO:0007249 4 0.015
pigmentation GO:0043473 85 0.015
cellular response to starvation GO:0009267 1 0.015
cell motility GO:0048870 244 0.015
regulation of apoptotic process GO:0042981 98 0.014
cytoskeleton organization GO:0007010 96 0.014
nucleobase containing compound transport GO:0015931 2 0.014
fertilization GO:0009566 3 0.014
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.014
pancreas development GO:0031016 84 0.014
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.014
nucleic acid templated transcription GO:0097659 181 0.014
rna splicing via transesterification reactions GO:0000375 10 0.014
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.014
response to stress GO:0006950 263 0.014
regulation of growth GO:0040008 42 0.014
negative regulation of macromolecule metabolic process GO:0010605 76 0.014
mitotic cell cycle process GO:1903047 48 0.013
positive regulation of response to stimulus GO:0048584 80 0.013
positive regulation of signaling GO:0023056 56 0.013
calcium ion transport into cytosol GO:0060402 3 0.013
sequestering of calcium ion GO:0051208 3 0.013
positive regulation of signal transduction GO:0009967 56 0.013
regulation of cellular protein catabolic process GO:1903362 1 0.013
guanosine containing compound catabolic process GO:1901069 2 0.013
cellular response to external stimulus GO:0071496 2 0.013
spindle assembly involved in mitosis GO:0090307 1 0.013
regulation of growth rate GO:0040009 1 0.013
embryonic organ morphogenesis GO:0048562 274 0.013
organonitrogen compound metabolic process GO:1901564 74 0.013
positive regulation of stem cell proliferation GO:2000648 1 0.013
cellular component disassembly GO:0022411 1 0.013
cellular response to stress GO:0033554 62 0.012
cellular amine metabolic process GO:0044106 2 0.012
negative regulation of developmental process GO:0051093 65 0.012
negative regulation of metabolic process GO:0009892 86 0.012
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.012
multicellular organismal macromolecule metabolic process GO:0044259 2 0.012
developmental process involved in reproduction GO:0003006 27 0.012
Worm
cell morphogenesis GO:0000902 289 0.012
regulation of protein ubiquitination GO:0031396 3 0.012
regulation of protein import into nucleus GO:0042306 2 0.012
ribonucleoside monophosphate catabolic process GO:0009158 4 0.012
mitotic nuclear division GO:0007067 18 0.012
regulation of multicellular organismal process GO:0051239 277 0.012
positive regulation of multicellular organismal process GO:0051240 52 0.012
macroautophagy GO:0016236 1 0.012
autophagy GO:0006914 4 0.012
regulation of cellular amine metabolic process GO:0033238 0 0.012
regulation of epidermis development GO:0045682 2 0.012
regulation of rna splicing GO:0043484 8 0.012
phagocytosis GO:0006909 3 0.012
regulation of stem cell proliferation GO:0072091 2 0.012
cell proliferation GO:0008283 80 0.012
viral process GO:0016032 1 0.011
apoptotic process GO:0006915 116 0.011
intracellular signal transduction GO:0035556 85 0.011
female sex differentiation GO:0046660 4 0.011
negative regulation of sequestering of calcium ion GO:0051283 4 0.011
rna export from nucleus GO:0006405 1 0.011
positive regulation of translation GO:0045727 1 0.011
cellular response to organic substance GO:0071310 105 0.011
post embryonic morphogenesis GO:0009886 4 0.011
sex determination GO:0007530 1 0.011
keratinocyte differentiation GO:0030216 0 0.011
transcription dna templated GO:0006351 181 0.011
neuron development GO:0048666 262 0.011
negative regulation of translation GO:0017148 1 0.011
oxoacid metabolic process GO:0043436 31 0.011
protein stabilization GO:0050821 2 0.011
rna biosynthetic process GO:0032774 181 0.010
cellular response to oxygen containing compound GO:1901701 20 0.010
monocyte differentiation GO:0030224 2 0.010
negative regulation of gene expression GO:0010629 65 0.010
intracellular mrna localization GO:0008298 1 0.010
cell migration GO:0016477 237 0.010
protein depolymerization GO:0051261 1 0.010
purine nucleoside monophosphate catabolic process GO:0009128 4 0.010
nucleobase containing compound biosynthetic process GO:0034654 205 0.010
blood vessel morphogenesis GO:0048514 216 0.010

prpf39 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.014