Danio rerio

0 known processes

phrf1

PHD and ring finger domains 1

(Aliases: zgc:172184,fb38b02,fc78a10,wu:fc78a10,wu:fb38b02)

phrf1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cellular biosynthetic process GO:0044249 286 0.267
larval development GO:0002164 2 0.205
autophagy GO:0006914 4 0.096
protein demethylation GO:0006482 2 0.077
organic substance biosynthetic process GO:1901576 289 0.062
histone demethylation GO:0016577 2 0.059
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.058
protein dealkylation GO:0008214 2 0.055
rna biosynthetic process GO:0032774 181 0.055
positive regulation of secretion by cell GO:1903532 1 0.055
heterocycle biosynthetic process GO:0018130 215 0.054
histone lysine demethylation GO:0070076 2 0.054
cellular aromatic compound metabolic process GO:0006725 295 0.054
response to bacterium GO:0009617 58 0.054
positive regulation of rna biosynthetic process GO:1902680 57 0.051
regulation of gene expression GO:0010468 265 0.048
positive regulation of innate immune response GO:0045089 8 0.048
brain development GO:0007420 293 0.048
rna metabolic process GO:0016070 219 0.047
nucleic acid metabolic process GO:0090304 244 0.047
regulation of cellular biosynthetic process GO:0031326 245 0.046
endosomal transport GO:0016197 2 0.046
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.044
regulation of macromolecule biosynthetic process GO:0010556 225 0.043
cellular macromolecule metabolic process GO:0044260 391 0.041
positive regulation of biological process GO:0048518 253 0.041
regulation of autophagy GO:0010506 3 0.039
rna localization GO:0006403 4 0.038
regulation of nitrogen compound metabolic process GO:0051171 251 0.038
circadian sleep wake cycle sleep GO:0050802 1 0.038
nucleocytoplasmic transport GO:0006913 4 0.037
single organism metabolic process GO:0044710 217 0.036
nucleic acid transport GO:0050657 2 0.036
cellular response to biotic stimulus GO:0071216 3 0.034
cellular response to external stimulus GO:0071496 2 0.034
cellular response to molecule of bacterial origin GO:0071219 3 0.033
aromatic compound biosynthetic process GO:0019438 217 0.033
cellular macromolecule biosynthetic process GO:0034645 224 0.032
gene expression GO:0010467 252 0.031
positive regulation of jnk cascade GO:0046330 3 0.031
cellular response to extracellular stimulus GO:0031668 2 0.031
regionalization GO:0003002 274 0.031
meiotic nuclear division GO:0007126 4 0.030
single organism nuclear import GO:1902593 3 0.030
organic cyclic compound metabolic process GO:1901360 301 0.030
cellular response to lipopolysaccharide GO:0071222 3 0.030
positive regulation of cell killing GO:0031343 2 0.030
regulation of protein localization to nucleus GO:1900180 2 0.029
positive regulation of defense response GO:0031349 9 0.029
protein metabolic process GO:0019538 183 0.029
cellular component disassembly GO:0022411 1 0.029
response to external stimulus GO:0009605 264 0.029
regulation of cell cycle GO:0051726 52 0.028
regulation of rna metabolic process GO:0051252 224 0.028
macromolecule modification GO:0043412 111 0.028
cellular amide metabolic process GO:0043603 4 0.027
regulation of protein catabolic process GO:0042176 1 0.027
nitrogen compound metabolic process GO:0006807 319 0.027
nucleobase containing compound biosynthetic process GO:0034654 205 0.027
regulation of binding GO:0051098 3 0.026
positive regulation of cellular component biogenesis GO:0044089 3 0.026
cellular response to nutrient levels GO:0031669 2 0.026
positive regulation of secretion GO:0051047 1 0.026
vacuolar transport GO:0007034 2 0.026
establishment of protein localization to organelle GO:0072594 4 0.025
circadian sleep wake cycle GO:0042745 2 0.025
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.025
negative regulation of cellular catabolic process GO:0031330 3 0.025
regulation of neurological system process GO:0031644 2 0.025
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.025
pigmentation GO:0043473 85 0.025
protein import GO:0017038 3 0.024
stem cell maintenance GO:0019827 4 0.024
chordate embryonic development GO:0043009 271 0.024
mrna stabilization GO:0048255 4 0.024
regulation of nucleic acid templated transcription GO:1903506 213 0.024
nuclear transport GO:0051169 4 0.024
protein secretion GO:0009306 1 0.024
single organism localization GO:1902578 225 0.024
cellular nitrogen compound biosynthetic process GO:0044271 218 0.024
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.024
regulation of multicellular organism growth GO:0040014 4 0.023
regulation of primary metabolic process GO:0080090 311 0.023
regulation of jak stat cascade GO:0046425 3 0.023
organic cyclic compound biosynthetic process GO:1901362 223 0.023
regulation of biosynthetic process GO:0009889 250 0.023
regulation of protein complex assembly GO:0043254 3 0.023
positive regulation of catabolic process GO:0009896 4 0.022
histone h3 k9 demethylation GO:0033169 2 0.022
multi organism process GO:0051704 134 0.022
cellular response to chemical stimulus GO:0070887 157 0.022
meiotic chromosome segregation GO:0045132 3 0.022
negative regulation of catabolic process GO:0009895 3 0.022
transcription from rna polymerase ii promoter GO:0006366 80 0.022
aging GO:0007568 2 0.021
locomotion GO:0040011 313 0.021
positive regulation of protein complex assembly GO:0031334 2 0.021
peptide metabolic process GO:0006518 1 0.021
tube morphogenesis GO:0035239 349 0.021
regulation of transcription dna templated GO:0006355 213 0.021
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.020
modification dependent macromolecule catabolic process GO:0043632 3 0.020
somitogenesis GO:0001756 87 0.020
response to other organism GO:0051707 97 0.020
biosynthetic process GO:0009058 294 0.019
regulation of macromolecule metabolic process GO:0060255 317 0.019
positive regulation of lymphocyte mediated immunity GO:0002708 1 0.019
sialylation GO:0097503 4 0.019
positive regulation of macromolecule metabolic process GO:0010604 93 0.019
modification dependent protein catabolic process GO:0019941 3 0.019
defense response GO:0006952 47 0.019
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.019
cellular nitrogen compound metabolic process GO:0034641 290 0.019
regulation of protein ubiquitination GO:0031396 3 0.019
regulation of cytokine production GO:0001817 3 0.019
nucleobase containing compound metabolic process GO:0006139 274 0.018
transport GO:0006810 220 0.018
cellular protein metabolic process GO:0044267 129 0.018
positive regulation of immune effector process GO:0002699 3 0.018
response to drug GO:0042493 3 0.018
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.018
positive regulation of nucleic acid templated transcription GO:1903508 57 0.018
cellular component movement GO:0006928 335 0.018
regulation of metabolic process GO:0019222 359 0.018
ubiquitin dependent protein catabolic process GO:0006511 3 0.017
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.017
rna transport GO:0050658 2 0.017
regulation of biological quality GO:0065008 263 0.017
single organism transport GO:0044765 206 0.017
positive regulation of stem cell proliferation GO:2000648 1 0.017
negative regulation of biosynthetic process GO:0009890 55 0.017
cellular response to starvation GO:0009267 1 0.017
lysosomal transport GO:0007041 2 0.016
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.016
regulation of natural killer cell mediated immunity GO:0002715 1 0.016
regulation of cytoplasmic transport GO:1903649 4 0.016
regulation of signaling GO:0023051 235 0.016
positive regulation of biosynthetic process GO:0009891 68 0.016
nuclear import GO:0051170 3 0.016
neurotransmitter transport GO:0006836 2 0.016
actin polymerization or depolymerization GO:0008154 2 0.016
regulation of cell activation GO:0050865 1 0.016
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.016
positive regulation of rna metabolic process GO:0051254 59 0.016
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.016
establishment of localization GO:0051234 244 0.016
response to external biotic stimulus GO:0043207 97 0.015
somite development GO:0061053 96 0.015
negative regulation of protein transport GO:0051224 3 0.015
positive regulation of leukocyte mediated immunity GO:0002705 1 0.015
regulation of calcium ion transport GO:0051924 2 0.015
cell cycle g1 s phase transition GO:0044843 1 0.015
regulation of response to nutrient levels GO:0032107 1 0.015
regulation of synapse assembly GO:0051963 3 0.015
regulation of cell communication GO:0010646 232 0.015
membrane invagination GO:0010324 1 0.015
response to organic substance GO:0010033 153 0.015
positive regulation of metabolic process GO:0009893 108 0.014
extrinsic apoptotic signaling pathway GO:0097191 3 0.014
regulation of synapse organization GO:0050807 3 0.014
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.014
protein modification process GO:0036211 100 0.014
regulation of hormone secretion GO:0046883 2 0.014
head development GO:0060322 303 0.014
regulation of protein transport GO:0051223 3 0.014
response to stress GO:0006950 263 0.014
chemosensory behavior GO:0007635 1 0.014
mesenchymal cell development GO:0014031 78 0.014
cell projection organization GO:0030030 284 0.014
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.014
antimicrobial humoral response GO:0019730 2 0.014
mesenchymal cell differentiation GO:0048762 87 0.014
positive regulation of map kinase activity GO:0043406 3 0.014
positive regulation of multi organism process GO:0043902 3 0.014
cellular amino acid metabolic process GO:0006520 7 0.014
embryo development ending in birth or egg hatching GO:0009792 271 0.014
cell cycle process GO:0022402 53 0.014
nucleobase containing compound transport GO:0015931 2 0.014
cellular carbohydrate metabolic process GO:0044262 4 0.014
positive regulation of stress activated mapk cascade GO:0032874 3 0.013
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
nuclear export GO:0051168 1 0.013
spermatid development GO:0007286 2 0.013
signal transduction GO:0007165 455 0.013
multicellular organism growth GO:0035264 4 0.013
regulation of protein metabolic process GO:0051246 56 0.013
regulation of leukocyte mediated immunity GO:0002703 1 0.013
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.013
exocytosis GO:0006887 1 0.013
response to nutrient GO:0007584 3 0.013
regulation of cellular metabolic process GO:0031323 320 0.013
negative regulation of macromolecule metabolic process GO:0010605 76 0.013
heterocycle metabolic process GO:0046483 290 0.013
branching morphogenesis of a nerve GO:0048755 4 0.013
proteasomal protein catabolic process GO:0010498 2 0.012
positive regulation of cellular metabolic process GO:0031325 94 0.012
regulation of production of molecular mediator of immune response GO:0002700 1 0.012
negative regulation of cellular process GO:0048523 283 0.012
neuron development GO:0048666 262 0.012
positive regulation of cell activation GO:0050867 1 0.012
cellular protein catabolic process GO:0044257 4 0.012
negative regulation of kinase activity GO:0033673 4 0.012
axon ensheathment in central nervous system GO:0032291 2 0.012
transcription dna templated GO:0006351 181 0.012
negative regulation of metabolic process GO:0009892 86 0.012
specification of organ identity GO:0010092 2 0.012
central nervous system development GO:0007417 387 0.012
regulation of stem cell proliferation GO:0072091 2 0.012
peptide transport GO:0015833 1 0.012
negative regulation of gene expression GO:0010629 65 0.012
cell part morphogenesis GO:0032990 246 0.012
response to biotic stimulus GO:0009607 97 0.012
meiotic cell cycle process GO:1903046 3 0.012
regulation of cellular protein catabolic process GO:1903362 1 0.012
response to chemical GO:0042221 320 0.012
negative regulation of cellular biosynthetic process GO:0031327 55 0.012
regulation of postsynaptic membrane potential GO:0060078 1 0.012
establishment of rna localization GO:0051236 3 0.012
negative regulation of mitotic cell cycle GO:0045930 11 0.012
regulation of jun kinase activity GO:0043506 3 0.012
tissue remodeling GO:0048771 4 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.011
positive regulation of jun kinase activity GO:0043507 2 0.011
cognition GO:0050890 1 0.011
chromatin organization GO:0006325 22 0.011
immune system process GO:0002376 241 0.011
regulation of dna replication GO:0006275 3 0.011
single organism organelle organization GO:1902589 199 0.011
positive regulation of cellular biosynthetic process GO:0031328 68 0.011
segmentation GO:0035282 97 0.011
cartilage development GO:0051216 96 0.011
protein localization to nucleus GO:0034504 3 0.011
regulation of cell killing GO:0031341 2 0.011
regulation of metal ion transport GO:0010959 4 0.011
regulation of dendrite development GO:0050773 3 0.011
regulation of cellular protein metabolic process GO:0032268 52 0.011
positive regulation of epithelial cell proliferation GO:0050679 1 0.011
regulation of dendrite morphogenesis GO:0048814 3 0.011
protein complex disassembly GO:0043241 1 0.011
synaptic vesicle recycling GO:0036465 1 0.011
maintenance of location GO:0051235 4 0.011
locomotor rhythm GO:0045475 3 0.011
protein import into nucleus GO:0006606 3 0.011
negative regulation of translation GO:0017148 1 0.011
positive regulation of leukocyte mediated cytotoxicity GO:0001912 1 0.011
innate immune response GO:0045087 13 0.010
toll like receptor signaling pathway GO:0002224 4 0.010
multicellular organismal response to stress GO:0033555 2 0.010
protein polymerization GO:0051258 4 0.010
lamellipodium organization GO:0097581 1 0.010
regulation of cell substrate adhesion GO:0010810 1 0.010
regulation of natural killer cell mediated cytotoxicity GO:0042269 1 0.010

phrf1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.014
nervous system disease DOID:863 0 0.011
musculoskeletal system disease DOID:17 0 0.011