Danio rerio

65 known processes

si:ch211-145b13.4

si:ch211-145b13.4

si:ch211-145b13.4 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
photoreceptor cell outer segment organization GO:0035845 9 0.162
sensory organ development GO:0007423 393 0.126
heart development GO:0007507 313 0.072
digestive tract morphogenesis GO:0048546 231 0.063
retina development in camera type eye GO:0060041 146 0.060
larval development GO:0002164 2 0.060
tube morphogenesis GO:0035239 349 0.059
negative regulation of cellular process GO:0048523 283 0.052
multicellular organism growth GO:0035264 4 0.047
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.045
organic cyclic compound metabolic process GO:1901360 301 0.043
eye development GO:0001654 277 0.039
positive regulation of cell cycle GO:0045787 3 0.038
localization of cell GO:0051674 244 0.037
regulation of dna replication GO:0006275 3 0.037
nuclear transport GO:0051169 4 0.036
rna metabolic process GO:0016070 219 0.036
mitotic dna integrity checkpoint GO:0044774 4 0.036
cellular nitrogen compound metabolic process GO:0034641 290 0.035
signal transduction GO:0007165 455 0.035
retina layer formation GO:0010842 24 0.034
nitrogen compound metabolic process GO:0006807 319 0.034
protein localization to nucleus GO:0034504 3 0.034
regulation of gene expression GO:0010468 265 0.033
morphogenesis of an epithelium GO:0002009 333 0.033
photoreceptor cell differentiation GO:0046530 55 0.032
cellular response to radiation GO:0071478 4 0.031
cellular nitrogen compound biosynthetic process GO:0044271 218 0.030
gene expression GO:0010467 252 0.030
regulation of biosynthetic process GO:0009889 250 0.030
sensory organ morphogenesis GO:0090596 200 0.029
photoreceptor cell development GO:0042461 40 0.028
generation of neurons GO:0048699 385 0.028
regionalization GO:0003002 274 0.027
hepaticobiliary system development GO:0061008 98 0.027
regulation of signaling GO:0023051 235 0.026
heterocycle metabolic process GO:0046483 290 0.026
nucleic acid metabolic process GO:0090304 244 0.026
nucleobase containing compound metabolic process GO:0006139 274 0.025
phototransduction GO:0007602 2 0.025
digestive system development GO:0055123 289 0.025
blood vessel development GO:0001568 246 0.024
polarized epithelial cell differentiation GO:0030859 4 0.023
regulation of cellular biosynthetic process GO:0031326 245 0.023
cellular biosynthetic process GO:0044249 286 0.023
specification of symmetry GO:0009799 204 0.023
endodermal cell fate determination GO:0007493 2 0.023
negative regulation of signal transduction GO:0009968 94 0.023
regulation of nitrogen compound metabolic process GO:0051171 251 0.023
regulation of cellular metabolic process GO:0031323 320 0.023
positive regulation of protein complex assembly GO:0031334 2 0.022
meiotic nuclear division GO:0007126 4 0.022
rna localization GO:0006403 4 0.022
cellular lipid catabolic process GO:0044242 3 0.021
regulation of signal transduction GO:0009966 225 0.021
neural retina development GO:0003407 49 0.021
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.021
determination of bilateral symmetry GO:0009855 204 0.021
positive regulation of cellular component biogenesis GO:0044089 3 0.020
negative regulation of synapse assembly GO:0051964 2 0.020
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.019
regulation of metabolic process GO:0019222 359 0.019
heart morphogenesis GO:0003007 156 0.019
regulation of response to stimulus GO:0048583 269 0.019
stem cell division GO:0017145 1 0.019
anterior posterior pattern specification GO:0009952 152 0.019
rna biosynthetic process GO:0032774 181 0.019
biosynthetic process GO:0009058 294 0.018
cellular aromatic compound metabolic process GO:0006725 295 0.018
regulation of protein catabolic process GO:0042176 1 0.018
nucleobase containing compound biosynthetic process GO:0034654 205 0.018
neuron differentiation GO:0030182 353 0.018
single organism metabolic process GO:0044710 217 0.018
vasculature development GO:0001944 278 0.018
negative regulation of metabolic process GO:0009892 86 0.018
camera type eye development GO:0043010 222 0.017
dna catabolic process GO:0006308 1 0.017
phototransduction visible light GO:0007603 2 0.017
positive regulation of transport GO:0051050 2 0.017
regulation of cell communication GO:0010646 232 0.017
cellular macromolecule metabolic process GO:0044260 391 0.016
regulation of primary metabolic process GO:0080090 311 0.016
immune system development GO:0002520 191 0.016
neurotransmitter transport GO:0006836 2 0.016
response to amino acid GO:0043200 2 0.016
transcription dna templated GO:0006351 181 0.016
negative regulation of gene expression GO:0010629 65 0.016
cytokinesis GO:0000910 3 0.016
negative regulation of biological process GO:0048519 304 0.016
embryonic heart tube development GO:0035050 133 0.016
regulation of multicellular organism growth GO:0040014 4 0.016
epithelial tube morphogenesis GO:0060562 148 0.016
circadian sleep wake cycle sleep GO:0050802 1 0.016
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.016
cell substrate adhesion GO:0031589 4 0.015
maintenance of location GO:0051235 4 0.015
nucleic acid templated transcription GO:0097659 181 0.015
developmental growth GO:0048589 166 0.015
muscle structure development GO:0061061 196 0.015
establishment of protein localization to organelle GO:0072594 4 0.015
circadian sleep wake cycle GO:0042745 2 0.015
aromatic compound biosynthetic process GO:0019438 217 0.015
stem cell maintenance GO:0019827 4 0.015
regulation of circadian rhythm GO:0042752 4 0.015
response to stress GO:0006950 263 0.014
cellular amine metabolic process GO:0044106 2 0.014
aging GO:0007568 2 0.014
retina morphogenesis in camera type eye GO:0060042 79 0.014
system process GO:0003008 185 0.014
neuroblast proliferation GO:0007405 2 0.014
negative regulation of protein phosphorylation GO:0001933 4 0.014
tube closure GO:0060606 1 0.014
regulation of cellular amine metabolic process GO:0033238 0 0.014
cellular response to chemical stimulus GO:0070887 157 0.014
neuron development GO:0048666 262 0.014
heterocycle biosynthetic process GO:0018130 215 0.014
cellular macromolecule biosynthetic process GO:0034645 224 0.014
somatic cell dna recombination GO:0016444 1 0.014
lipid storage GO:0019915 1 0.014
embryo development ending in birth or egg hatching GO:0009792 271 0.014
eye morphogenesis GO:0048592 144 0.014
protein targeting to nucleus GO:0044744 3 0.014
hormone secretion GO:0046879 2 0.013
extrinsic apoptotic signaling pathway GO:0097191 3 0.013
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.013
cellular response to stress GO:0033554 62 0.013
cellular response to light stimulus GO:0071482 4 0.013
small molecule catabolic process GO:0044282 3 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
cell matrix adhesion GO:0007160 4 0.013
sensory perception GO:0007600 39 0.013
olfactory bulb development GO:0021772 4 0.013
regulation of blood vessel size GO:0050880 2 0.013
regulation of synapse organization GO:0050807 3 0.013
positive regulation of synapse assembly GO:0051965 1 0.013
cell surface receptor signaling pathway GO:0007166 325 0.013
positive regulation of catabolic process GO:0009896 4 0.013
regulation of metal ion transport GO:0010959 4 0.013
stem cell proliferation GO:0072089 4 0.013
cellular component disassembly GO:0022411 1 0.013
digestive tract development GO:0048565 265 0.013
convergent extension GO:0060026 118 0.013
meiotic cell cycle process GO:1903046 3 0.013
regulation of myotube differentiation GO:0010830 2 0.013
adult behavior GO:0030534 2 0.013
pancreas development GO:0031016 84 0.012
nucleocytoplasmic transport GO:0006913 4 0.012
olfactory lobe development GO:0021988 4 0.012
post embryonic organ development GO:0048569 4 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
regulation of nucleic acid templated transcription GO:1903506 213 0.012
positive regulation of glucose transport GO:0010828 1 0.012
synaptic vesicle endocytosis GO:0048488 1 0.012
regulation of circadian sleep wake cycle sleep GO:0045187 1 0.012
regulation of macromolecule biosynthetic process GO:0010556 225 0.012
negative regulation of macromolecule metabolic process GO:0010605 76 0.012
cell cycle g1 s phase transition GO:0044843 1 0.012
regulation of synapse assembly GO:0051963 3 0.012
regulation of cytokine production GO:0001817 3 0.012
regulation of rna metabolic process GO:0051252 224 0.012
cellular component biogenesis GO:0044085 178 0.012
telomere organization GO:0032200 1 0.012
regulation of nucleoside metabolic process GO:0009118 2 0.012
positive regulation of glucose import GO:0046326 1 0.012
single organism nuclear import GO:1902593 3 0.012
positive regulation of nucleotide catabolic process GO:0030813 1 0.012
cellular response to oxygen levels GO:0071453 1 0.012
embryonic organ development GO:0048568 381 0.012
amine metabolic process GO:0009308 2 0.011
regulation of reproductive process GO:2000241 4 0.011
chordate embryonic development GO:0043009 271 0.011
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.011
regulation of establishment of protein localization GO:0070201 4 0.011
g1 s transition of mitotic cell cycle GO:0000082 1 0.011
organic substance biosynthetic process GO:1901576 289 0.011
regulation of binding GO:0051098 3 0.011
sleep GO:0030431 1 0.011
positive regulation of myeloid cell differentiation GO:0045639 2 0.011
eye photoreceptor cell development GO:0042462 30 0.011
transcription from rna polymerase ii promoter GO:0006366 80 0.011
organic cyclic compound biosynthetic process GO:1901362 223 0.011
growth GO:0040007 174 0.011
cellular response to molecule of bacterial origin GO:0071219 3 0.011
dorsal motor nucleus of vagus nerve development GO:0021744 4 0.011
light absorption GO:0016037 2 0.011
regulation of localization GO:0032879 104 0.011
microtubule organizing center organization GO:0031023 1 0.011
regulation of response to extracellular stimulus GO:0032104 1 0.011
cellular response to extracellular stimulus GO:0031668 2 0.011
regulation of glucose transport GO:0010827 1 0.010
brain development GO:0007420 293 0.010
regulation of macromolecule metabolic process GO:0060255 317 0.010
regulation of cell activation GO:0050865 1 0.010
cellular response to hypoxia GO:0071456 1 0.010
positive regulation of striated muscle tissue development GO:0045844 1 0.010
regulation of transcription dna templated GO:0006355 213 0.010
positive regulation of stress activated mapk cascade GO:0032874 3 0.010
mitotic dna damage checkpoint GO:0044773 4 0.010
cell migration GO:0016477 237 0.010
hypothalamus cell differentiation GO:0021979 4 0.010
protein import into nucleus GO:0006606 3 0.010
regulation of synaptic plasticity GO:0048167 1 0.010
negative chemotaxis GO:0050919 1 0.010
response to drug GO:0042493 3 0.010
primary neural tube formation GO:0014020 1 0.010
cellular response to decreased oxygen levels GO:0036294 1 0.010

si:ch211-145b13.4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.021
nervous system disease DOID:863 0 0.021
sensory system disease DOID:0050155 0 0.019
eye and adnexa disease DOID:1492 0 0.019
eye disease DOID:5614 0 0.019
disease of metabolism DOID:0014667 0 0.014