Danio rerio

0 known processes

sf3b5

splicing factor 3b, subunit 5

(Aliases: si:ch211-8a9.5,zgc:92874)

sf3b5 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.612
Worm
regulation of gene expression GO:0010468 265 0.528
rna metabolic process GO:0016070 219 0.498
nucleic acid metabolic process GO:0090304 244 0.473
organic cyclic compound metabolic process GO:1901360 301 0.469
nitrogen compound metabolic process GO:0006807 319 0.460
organic cyclic compound biosynthetic process GO:1901362 223 0.394
gene expression GO:0010467 252 0.384
regulation of metabolic process GO:0019222 359 0.377
locomotion GO:0040011 313 0.375
cellular aromatic compound metabolic process GO:0006725 295 0.352
embryo development ending in birth or egg hatching GO:0009792 271 0.346
Worm
regulation of meiotic cell cycle GO:0051445 1 0.331
regulation of primary metabolic process GO:0080090 311 0.331
cellular nitrogen compound metabolic process GO:0034641 290 0.318
nucleobase containing compound metabolic process GO:0006139 274 0.309
cellular biosynthetic process GO:0044249 286 0.299
organic substance biosynthetic process GO:1901576 289 0.281
macromolecule biosynthetic process GO:0009059 227 0.272
heterocycle metabolic process GO:0046483 290 0.271
alternative mrna splicing via spliceosome GO:0000380 1 0.266
nuclear migration GO:0007097 3 0.258
rna biosynthetic process GO:0032774 181 0.253
nucleic acid templated transcription GO:0097659 181 0.251
regulation of cellular biosynthetic process GO:0031326 245 0.246
cellular macromolecule metabolic process GO:0044260 391 0.243
regulation of macromolecule metabolic process GO:0060255 317 0.234
transcription dna templated GO:0006351 181 0.218
cellular macromolecule biosynthetic process GO:0034645 224 0.213
cell motility GO:0048870 244 0.212
biosynthetic process GO:0009058 294 0.212
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.195
aging GO:0007568 2 0.188
regulation of nitrogen compound metabolic process GO:0051171 251 0.183
reproductive process GO:0022414 40 0.180
Worm
aromatic compound biosynthetic process GO:0019438 217 0.174
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.174
regulation of rna metabolic process GO:0051252 224 0.162
regulation of cellular metabolic process GO:0031323 320 0.160
generation of neurons GO:0048699 385 0.154
meiotic nuclear division GO:0007126 4 0.152
nucleobase containing compound biosynthetic process GO:0034654 205 0.149
single organism localization GO:1902578 225 0.142
regulation of mrna splicing via spliceosome GO:0048024 3 0.122
establishment of localization GO:0051234 244 0.118
Worm
cell migration GO:0016477 237 0.117
positive regulation of cell cycle GO:0045787 3 0.116
heart development GO:0007507 313 0.114
pronuclear migration GO:0035046 1 0.114
localization of cell GO:0051674 244 0.110
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.110
regulation of nucleic acid templated transcription GO:1903506 213 0.110
mrna splicing via spliceosome GO:0000398 10 0.103
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.102
regulation of developmental process GO:0050793 247 0.101
regulation of biosynthetic process GO:0009889 250 0.099
regulation of macromolecule biosynthetic process GO:0010556 225 0.093
cellular nitrogen compound biosynthetic process GO:0044271 218 0.093
single organism organelle organization GO:1902589 199 0.091
Fly
heterocycle biosynthetic process GO:0018130 215 0.089
eye development GO:0001654 277 0.076
signal transduction GO:0007165 455 0.075
mitotic g2 dna damage checkpoint GO:0007095 3 0.074
mitotic cell cycle GO:0000278 64 0.068
Fly
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.064
protein metabolic process GO:0019538 183 0.061
regulation of rna biosynthetic process GO:2001141 213 0.060
single organism metabolic process GO:0044710 217 0.060
response to stress GO:0006950 263 0.058
mrna processing GO:0006397 14 0.058
transcription from rna polymerase ii promoter GO:0006366 80 0.057
death GO:0016265 121 0.056
single organism transport GO:0044765 206 0.055
cellular carbohydrate metabolic process GO:0044262 4 0.053
reproduction GO:0000003 40 0.052
Worm
rna splicing GO:0008380 16 0.051
transport GO:0006810 220 0.051
Worm
regulation of mrna processing GO:0050684 3 0.050
negative regulation of cellular process GO:0048523 283 0.050
camera type eye development GO:0043010 222 0.049
peptidyl lysine acetylation GO:0018394 2 0.048
cellular component movement GO:0006928 335 0.048
cellular component biogenesis GO:0044085 178 0.046
regulation of transcription dna templated GO:0006355 213 0.045
internal peptidyl lysine acetylation GO:0018393 2 0.045
meiotic cell cycle process GO:1903046 3 0.044
multi organism process GO:0051704 134 0.043
single organism reproductive process GO:0044702 40 0.042
Worm
protein acylation GO:0043543 3 0.041
internal protein amino acid acetylation GO:0006475 2 0.040
organelle organization GO:0006996 227 0.039
Fly
single fertilization GO:0007338 3 0.039
regulation of organ growth GO:0046620 3 0.039
heterocycle catabolic process GO:0046700 15 0.039
multicellular organism growth GO:0035264 4 0.039
protein acetylation GO:0006473 2 0.039
cell cycle GO:0007049 93 0.038
Fly
positive regulation of biological process GO:0048518 253 0.038
sensory organ development GO:0007423 393 0.038
regulation of signaling GO:0023051 235 0.038
apoptotic process GO:0006915 116 0.038
fertilization GO:0009566 3 0.038
meiotic chromosome segregation GO:0045132 3 0.037
cell death GO:0008219 121 0.037
positive regulation of cellular process GO:0048522 201 0.035
neuron differentiation GO:0030182 353 0.035
growth GO:0040007 174 0.035
protein localization to nucleus GO:0034504 3 0.034
regulation of cellular amino acid metabolic process GO:0006521 0 0.034
carboxylic acid metabolic process GO:0019752 22 0.034
regulation of oocyte development GO:0060281 3 0.033
adult behavior GO:0030534 2 0.032
energy reserve metabolic process GO:0006112 2 0.032
regulation of cellular amine metabolic process GO:0033238 0 0.032
response to chemical GO:0042221 320 0.032
cellular response to chemical stimulus GO:0070887 157 0.032
segmentation GO:0035282 97 0.032
organelle assembly GO:0070925 110 0.032
g2 dna damage checkpoint GO:0031572 3 0.031
regulation of multicellular organismal development GO:2000026 223 0.030
regulation of heart growth GO:0060420 2 0.030
cell surface receptor signaling pathway GO:0007166 325 0.029
retina development in camera type eye GO:0060041 146 0.029
negative regulation of biological process GO:0048519 304 0.029
germ cell development GO:0007281 22 0.029
rna localization GO:0006403 4 0.029
cell projection organization GO:0030030 284 0.029
positive regulation of cell death GO:0010942 29 0.029
somite development GO:0061053 96 0.028
rna processing GO:0006396 25 0.028
regulation of binding GO:0051098 3 0.027
mrna metabolic process GO:0016071 20 0.027
cellular amine metabolic process GO:0044106 2 0.027
cell morphogenesis GO:0000902 289 0.027
cell proliferation GO:0008283 80 0.027
ubiquitin dependent protein catabolic process GO:0006511 3 0.027
photoreceptor cell development GO:0042461 40 0.027
nuclear transport GO:0051169 4 0.026
pole plasm assembly GO:0007315 4 0.026
catabolic process GO:0009056 32 0.026
cellular response to dna damage stimulus GO:0006974 24 0.026
regulation of multicellular organismal process GO:0051239 277 0.026
organic acid metabolic process GO:0006082 31 0.025
regulation of reproductive process GO:2000241 4 0.025
stem cell maintenance GO:0019827 4 0.025
cellular protein catabolic process GO:0044257 4 0.025
regulation of cellular component organization GO:0051128 86 0.025
phosphate containing compound metabolic process GO:0006796 108 0.025
cellular response to radiation GO:0071478 4 0.024
regulation of protein targeting GO:1903533 2 0.024
negative regulation of signal transduction by p53 class mediator GO:1901797 8 0.024
cellular protein metabolic process GO:0044267 129 0.024
regulation of cell cycle process GO:0010564 20 0.024
oxoacid metabolic process GO:0043436 31 0.024
phagocytosis GO:0006909 3 0.024
regulation of embryonic development GO:0045995 47 0.023
cellular amino acid metabolic process GO:0006520 7 0.023
developmental process involved in reproduction GO:0003006 27 0.023
Worm
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.023
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.023
protein modification process GO:0036211 100 0.022
cellular response to starvation GO:0009267 1 0.022
regulation of cellular ketone metabolic process GO:0010565 7 0.022
phagocytosis engulfment GO:0006911 1 0.022
maintenance of location GO:0051235 4 0.022
somitogenesis GO:0001756 87 0.022
chordate embryonic development GO:0043009 271 0.021
amine metabolic process GO:0009308 2 0.021
cell cycle process GO:0022402 53 0.021
Fly
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.021
negative regulation of gene expression GO:0010629 65 0.021
establishment of localization in cell GO:0051649 77 0.021
oocyte anterior posterior axis specification GO:0007314 4 0.021
cell part morphogenesis GO:0032990 246 0.021
protein import into nucleus GO:0006606 3 0.021
regulation of cytoplasmic transport GO:1903649 4 0.021
regulation of cyclin dependent protein serine threonine kinase activity GO:0000079 1 0.021
establishment of organelle localization GO:0051656 45 0.021
microtubule based process GO:0007017 60 0.020
Fly
positive regulation of chromatin modification GO:1903310 1 0.020
nuclear export GO:0051168 1 0.020
blood vessel development GO:0001568 246 0.020
mitotic dna integrity checkpoint GO:0044774 4 0.020
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.020
digestive system development GO:0055123 289 0.020
positive regulation of transport GO:0051050 2 0.020
positive regulation of cellular catabolic process GO:0031331 3 0.020
rna splicing via transesterification reactions GO:0000375 10 0.019
intracellular signal transduction GO:0035556 85 0.019
single organism nuclear import GO:1902593 3 0.019
cell morphogenesis involved in differentiation GO:0000904 195 0.019
regulation of establishment of protein localization GO:0070201 4 0.019
cytoskeleton organization GO:0007010 96 0.019
Fly
morphogenesis of an epithelium GO:0002009 333 0.019
developmental growth GO:0048589 166 0.019
neuron development GO:0048666 262 0.018
synaptic growth at neuromuscular junction GO:0051124 2 0.018
i kappab kinase nf kappab signaling GO:0007249 4 0.018
cellular response to nutrient levels GO:0031669 2 0.018
cellular localization GO:0051641 97 0.018
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.018
nucleocytoplasmic transport GO:0006913 4 0.018
synaptic vesicle transport GO:0048489 1 0.018
gene silencing by rna GO:0031047 4 0.018
nuclear transcribed mrna catabolic process GO:0000956 4 0.018
regulation of protein transport GO:0051223 3 0.018
cellular response to organic substance GO:0071310 105 0.018
regulation of protein metabolic process GO:0051246 56 0.018
mitotic sister chromatid segregation GO:0000070 6 0.018
regulation of cytokine production GO:0001817 3 0.018
negative regulation of response to dna damage stimulus GO:2001021 3 0.018
regulation of protein import into nucleus GO:0042306 2 0.017
mrna transport GO:0051028 2 0.017
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.017
cytoplasm organization GO:0007028 4 0.017
cellular component morphogenesis GO:0032989 336 0.017
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.017
anterior posterior pattern specification GO:0009952 152 0.017
cellular ketone metabolic process GO:0042180 11 0.017
neuron neuron synaptic transmission GO:0007270 1 0.017
mitochondrion organization GO:0007005 4 0.017
protein complex localization GO:0031503 1 0.017
nuclear import GO:0051170 3 0.017
positive regulation of catabolic process GO:0009896 4 0.017
post embryonic development GO:0009791 7 0.016
Worm
macromolecular complex assembly GO:0065003 35 0.016
positive regulation of cellular amine metabolic process GO:0033240 0 0.016
central nervous system development GO:0007417 387 0.016
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.016
regulation of cell communication GO:0010646 232 0.016
cellular response to extracellular stimulus GO:0031668 2 0.016
regulation of erk1 and erk2 cascade GO:0070372 4 0.016
lipid storage GO:0019915 1 0.016
regulation of cell shape GO:0008360 1 0.016
g1 s transition of mitotic cell cycle GO:0000082 1 0.016
response to uv GO:0009411 3 0.016
organonitrogen compound metabolic process GO:1901564 74 0.016
protein secretion GO:0009306 1 0.016
organelle localization GO:0051640 49 0.016
oocyte maturation GO:0001556 4 0.015
positive regulation of programmed cell death GO:0043068 29 0.015
negative regulation of macromolecule metabolic process GO:0010605 76 0.015
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.015
regulation of programmed cell death GO:0043067 101 0.015
ribonucleoprotein complex biogenesis GO:0022613 13 0.015
chromatin organization GO:0006325 22 0.015
neuron projection development GO:0031175 180 0.015
response to nutrient GO:0007584 3 0.015
nuclear division GO:0000280 23 0.015
cellular response to stress GO:0033554 62 0.015
organic substance catabolic process GO:1901575 28 0.015
cellular catabolic process GO:0044248 27 0.015
regulation of cell development GO:0060284 100 0.015
regulation of cell maturation GO:1903429 1 0.015
macromolecular complex subunit organization GO:0043933 74 0.015
Fly
membrane invagination GO:0010324 1 0.015
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.015
signal transduction by p53 class mediator GO:0072331 13 0.015
double strand break repair via homologous recombination GO:0000724 1 0.014
cell projection morphogenesis GO:0048858 244 0.014
phosphorus metabolic process GO:0006793 109 0.014
positive regulation of histone modification GO:0031058 1 0.014
spindle organization GO:0007051 5 0.014
Fly
microtubule cytoskeleton organization GO:0000226 33 0.014
Fly
histone modification GO:0016570 20 0.014
response to organic substance GO:0010033 153 0.014
cellular component assembly GO:0022607 170 0.014
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.014
sexual reproduction GO:0019953 36 0.014
nucleic acid transport GO:0050657 2 0.014
posttranscriptional regulation of gene expression GO:0010608 14 0.014
regulation of cellular protein metabolic process GO:0032268 52 0.014
cellular nitrogen compound catabolic process GO:0044270 15 0.014
double strand break repair GO:0006302 3 0.014
gene silencing GO:0016458 4 0.014
angiogenesis GO:0001525 158 0.013
establishment of synaptic vesicle localization GO:0097480 1 0.013
alpha amino acid metabolic process GO:1901605 3 0.013
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.013
regulation of localization GO:0032879 104 0.013
regulation of cell activation GO:0050865 1 0.013
sensory organ morphogenesis GO:0090596 200 0.013
negative regulation of mrna metabolic process GO:1903312 3 0.013
negative regulation of metabolic process GO:0009892 86 0.013
regulation of nucleotide catabolic process GO:0030811 2 0.013
negative regulation of rna metabolic process GO:0051253 48 0.013
multi organism cellular process GO:0044764 2 0.013
intracellular mrna localization GO:0008298 1 0.013
guanosine containing compound metabolic process GO:1901068 4 0.013
extrinsic apoptotic signaling pathway GO:0097191 3 0.013
ribonucleoside monophosphate catabolic process GO:0009158 4 0.013
gtp catabolic process GO:0006184 2 0.013
protein targeting to nucleus GO:0044744 3 0.013
neuroblast proliferation GO:0007405 2 0.013
regulation of protein localization to nucleus GO:1900180 2 0.013
recombinational repair GO:0000725 1 0.013
mitotic nuclear division GO:0007067 18 0.013
regulation of gene expression epigenetic GO:0040029 11 0.013
multicellular organism reproduction GO:0032504 35 0.013
positive regulation of nucleoside metabolic process GO:0045979 1 0.012
regulation of protein binding GO:0043393 3 0.012
regulation of anatomical structure morphogenesis GO:0022603 130 0.012
sensory perception of chemical stimulus GO:0007606 3 0.012
stem cell development GO:0048864 82 0.012
cellular response to external stimulus GO:0071496 2 0.012
rna 3 end processing GO:0031123 2 0.012
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.012
negative regulation of i kappab kinase nf kappab signaling GO:0043124 1 0.012
response to monosaccharide GO:0034284 3 0.012
stem cell proliferation GO:0072089 4 0.012
histone deacetylation GO:0016575 2 0.012
mitotic g2 m transition checkpoint GO:0044818 3 0.012
negative regulation of mitosis GO:0045839 3 0.012
negative regulation of intracellular transport GO:0032387 3 0.012
positive regulation of cellular biosynthetic process GO:0031328 68 0.012
positive regulation of metabolic process GO:0009893 108 0.012
response to external stimulus GO:0009605 264 0.012
macromolecule modification GO:0043412 111 0.012
regulation of rna splicing GO:0043484 8 0.012
regulation of protein ubiquitination GO:0031396 3 0.012
negative regulation of cytoplasmic transport GO:1903650 2 0.012
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.012
vesicle mediated transport GO:0016192 22 0.012
Worm
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.011
proteasomal protein catabolic process GO:0010498 2 0.011
reflex GO:0060004 2 0.011
chromatin modification GO:0016568 21 0.011
positive regulation of chromosome organization GO:2001252 1 0.011
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.011
regulation of carbohydrate metabolic process GO:0006109 4 0.011
regulation of apoptotic process GO:0042981 98 0.011
programmed cell death GO:0012501 119 0.011
regulation of synaptic plasticity GO:0048167 1 0.011
cell projection assembly GO:0030031 64 0.011
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.011
negative regulation of protein transport GO:0051224 3 0.011
stem cell division GO:0017145 1 0.011
posttranscriptional gene silencing GO:0016441 3 0.011
sex determination GO:0007530 1 0.011
regulation of cell death GO:0010941 103 0.011
negative regulation of neural precursor cell proliferation GO:2000178 1 0.011
regulation of biological quality GO:0065008 263 0.011
modification dependent macromolecule catabolic process GO:0043632 3 0.011
negative regulation of epithelial cell proliferation GO:0050680 1 0.011
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.010
meiotic cell cycle GO:0051321 5 0.010
establishment of rna localization GO:0051236 3 0.010
response to light stimulus GO:0009416 46 0.010
compound eye development GO:0048749 2 0.010
carbohydrate biosynthetic process GO:0016051 1 0.010
chromosome organization GO:0051276 31 0.010
axon development GO:0061564 166 0.010
negative regulation of response to stimulus GO:0048585 104 0.010
endocytosis GO:0006897 16 0.010
Worm
erk1 and erk2 cascade GO:0070371 4 0.010
viral process GO:0016032 1 0.010
autophagy GO:0006914 4 0.010
establishment of nucleus localization GO:0040023 7 0.010
rna catabolic process GO:0006401 7 0.010
cellular response to light stimulus GO:0071482 4 0.010
enzyme linked receptor protein signaling pathway GO:0007167 106 0.010
eye photoreceptor cell development GO:0042462 30 0.010
regulation of cell differentiation GO:0045595 142 0.010
regulation of multicellular organism growth GO:0040014 4 0.010
regulation of mitochondrion organization GO:0010821 1 0.010
chromosome organization involved in meiosis GO:0070192 1 0.010
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.010

sf3b5 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012