Danio rerio

0 known processes

sf3b4

splicing factor 3b, subunit 4

(Aliases: wu:fb36a04,chunp6902,fb36a04)

sf3b4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.418
regulation of primary metabolic process GO:0080090 311 0.264
Mouse
alternative mrna splicing via spliceosome GO:0000380 1 0.262
regulation of nitrogen compound metabolic process GO:0051171 251 0.261
Mouse
death GO:0016265 121 0.261
cellular biosynthetic process GO:0044249 286 0.242
regulation of mrna processing GO:0050684 3 0.229
Mouse
organic cyclic compound metabolic process GO:1901360 301 0.222
Mouse
cellular aromatic compound metabolic process GO:0006725 295 0.220
Mouse
gene expression GO:0010467 252 0.217
Mouse
nucleic acid metabolic process GO:0090304 244 0.215
Mouse
regulation of cellular metabolic process GO:0031323 320 0.209
Mouse
maintenance of location GO:0051235 4 0.206
negative regulation of mrna metabolic process GO:1903312 3 0.198
rna metabolic process GO:0016070 219 0.189
Mouse
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.183
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.183
Mouse
regulation of mrna splicing via spliceosome GO:0048024 3 0.174
Mouse
cellular macromolecule metabolic process GO:0044260 391 0.153
Mouse
lipid storage GO:0019915 1 0.151
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.147
nucleobase containing compound metabolic process GO:0006139 274 0.128
Mouse
regulation of developmental process GO:0050793 247 0.128
regulation of cellular biosynthetic process GO:0031326 245 0.121
negative regulation of mitosis GO:0045839 3 0.120
embryo development ending in birth or egg hatching GO:0009792 271 0.113
nitrogen compound metabolic process GO:0006807 319 0.109
Mouse
organelle assembly GO:0070925 110 0.104
regulation of rna metabolic process GO:0051252 224 0.102
Mouse
heterocycle metabolic process GO:0046483 290 0.101
Mouse
cellular nitrogen compound metabolic process GO:0034641 290 0.098
Mouse
muscle structure development GO:0061061 196 0.092
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.082
Mouse
organic substance biosynthetic process GO:1901576 289 0.079
oocyte anterior posterior axis specification GO:0007314 4 0.077
negative regulation of cellular process GO:0048523 283 0.074
organism emergence from protective structure GO:0071684 4 0.071
locomotion GO:0040011 313 0.070
regulation of metabolic process GO:0019222 359 0.068
Mouse
macromolecule biosynthetic process GO:0009059 227 0.068
apoptotic process GO:0006915 116 0.068
negative regulation of mrna processing GO:0050686 1 0.067
regulation of multicellular organismal development GO:2000026 223 0.065
aging GO:0007568 2 0.062
rna biosynthetic process GO:0032774 181 0.061
regulation of biosynthetic process GO:0009889 250 0.058
regulation of gene expression GO:0010468 265 0.057
Mouse
regulation of meiotic cell cycle GO:0051445 1 0.057
cellular macromolecule biosynthetic process GO:0034645 224 0.056
multi organism process GO:0051704 134 0.056
regulation of protein complex assembly GO:0043254 3 0.054
aromatic compound biosynthetic process GO:0019438 217 0.053
organelle organization GO:0006996 227 0.050
Fly
transcription dna templated GO:0006351 181 0.049
negative regulation of mrna splicing via spliceosome GO:0048025 1 0.049
cytoskeleton organization GO:0007010 96 0.048
Fly
cellular component assembly GO:0022607 170 0.048
signal transduction GO:0007165 455 0.047
regulation of nucleic acid templated transcription GO:1903506 213 0.046
regulation of biological quality GO:0065008 263 0.045
single organism reproductive process GO:0044702 40 0.044
positive regulation of biological process GO:0048518 253 0.044
Mouse
regulation of cell differentiation GO:0045595 142 0.044
negative regulation of biological process GO:0048519 304 0.043
nucleus organization GO:0006997 7 0.043
maturation of ssu rrna GO:0030490 1 0.043
muscle cell differentiation GO:0042692 139 0.042
positive regulation of transport GO:0051050 2 0.042
meiotic nuclear division GO:0007126 4 0.041
sexual reproduction GO:0019953 36 0.041
cell death GO:0008219 121 0.040
regulation of macromolecule metabolic process GO:0060255 317 0.040
Mouse
single organism organelle organization GO:1902589 199 0.039
Fly
rna processing GO:0006396 25 0.039
Mouse
protein targeting to nucleus GO:0044744 3 0.039
sequestering of metal ion GO:0051238 3 0.037
regulation of signal transduction GO:0009966 225 0.037
cell cycle process GO:0022402 53 0.037
Fly
heterocycle biosynthetic process GO:0018130 215 0.037
rna splicing GO:0008380 16 0.036
Mouse
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.035
chemosensory behavior GO:0007635 1 0.035
single organism metabolic process GO:0044710 217 0.034
regulation of multicellular organismal process GO:0051239 277 0.034
rna splicing via transesterification reactions GO:0000375 10 0.034
Mouse
muscle organ development GO:0007517 101 0.033
regulation of response to stimulus GO:0048583 269 0.033
biosynthetic process GO:0009058 294 0.032
regulation of cell death GO:0010941 103 0.032
organic cyclic compound biosynthetic process GO:1901362 223 0.032
cellular nitrogen compound biosynthetic process GO:0044271 218 0.032
calcium ion transport into cytosol GO:0060402 3 0.031
intracellular signal transduction GO:0035556 85 0.031
programmed cell death GO:0012501 119 0.031
establishment of localization GO:0051234 244 0.031
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.031
cell cycle GO:0007049 93 0.030
Fly
regulation of rna splicing GO:0043484 8 0.030
Mouse
regulation of protein import into nucleus GO:0042306 2 0.030
multicellular organism growth GO:0035264 4 0.029
regulation of multicellular organism growth GO:0040014 4 0.029
mitotic nuclear division GO:0007067 18 0.029
skin development GO:0043588 54 0.029
establishment of protein localization to organelle GO:0072594 4 0.029
rna localization GO:0006403 4 0.029
nuclear transport GO:0051169 4 0.029
mrna metabolic process GO:0016071 20 0.029
Mouse
negative regulation of rna splicing GO:0033119 1 0.028
spermatid development GO:0007286 2 0.028
regulation of signaling GO:0023051 235 0.028
regulation of intracellular protein transport GO:0033157 3 0.028
regulation of macromolecule biosynthetic process GO:0010556 225 0.028
nuclear export GO:0051168 1 0.027
positive regulation of cellular process GO:0048522 201 0.026
Mouse
cellular component movement GO:0006928 335 0.026
eye development GO:0001654 277 0.026
response to nutrient GO:0007584 3 0.026
multicellular organism reproduction GO:0032504 35 0.025
keratinocyte differentiation GO:0030216 0 0.025
embryonic organ morphogenesis GO:0048562 274 0.025
single organism nuclear import GO:1902593 3 0.025
multi organism reproductive process GO:0044703 36 0.025
nuclear envelope organization GO:0006998 2 0.025
cell proliferation GO:0008283 80 0.024
muscle cell development GO:0055001 115 0.024
positive regulation of epithelial cell proliferation GO:0050679 1 0.024
regionalization GO:0003002 274 0.024
regulation of rna biosynthetic process GO:2001141 213 0.024
cellular response to external stimulus GO:0071496 2 0.024
cellular component assembly involved in morphogenesis GO:0010927 107 0.024
behavior GO:0007610 74 0.024
lateral inhibition GO:0046331 1 0.024
striated muscle cell development GO:0055002 108 0.024
positive regulation of cell cycle GO:0045787 3 0.023
sensory organ development GO:0007423 393 0.023
organelle fission GO:0048285 23 0.023
regulation of cytoplasmic transport GO:1903649 4 0.023
nucleic acid templated transcription GO:0097659 181 0.023
epithelial tube morphogenesis GO:0060562 148 0.022
regulation of protein transport GO:0051223 3 0.022
release of sequestered calcium ion into cytosol GO:0051209 3 0.022
reproduction GO:0000003 40 0.022
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.022
heart development GO:0007507 313 0.021
female gamete generation GO:0007292 14 0.021
regulation of nucleocytoplasmic transport GO:0046822 2 0.021
negative regulation of sequestering of calcium ion GO:0051283 4 0.020
developmental growth GO:0048589 166 0.020
cellular protein metabolic process GO:0044267 129 0.020
regulation of anatomical structure morphogenesis GO:0022603 130 0.020
gamete generation GO:0007276 33 0.020
regulation of apoptotic process GO:0042981 98 0.020
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.019
protein localization to nucleus GO:0034504 3 0.019
chordate embryonic development GO:0043009 271 0.019
transport GO:0006810 220 0.019
vasculature development GO:0001944 278 0.019
cellular component biogenesis GO:0044085 178 0.019
negative regulation of rna metabolic process GO:0051253 48 0.018
establishment of rna localization GO:0051236 3 0.018
regulation of establishment of protein localization GO:0070201 4 0.018
protein import into nucleus GO:0006606 3 0.018
regulation of mrna metabolic process GO:1903311 6 0.018
Mouse
response to stress GO:0006950 263 0.018
homeostatic process GO:0042592 142 0.017
positive regulation of synaptic growth at neuromuscular junction GO:0045887 1 0.017
negative regulation of multicellular organismal process GO:0051241 69 0.017
generation of neurons GO:0048699 385 0.016
spliceosomal complex assembly GO:0000245 1 0.016
germ cell development GO:0007281 22 0.016
cellular amino acid metabolic process GO:0006520 7 0.016
phagocytosis GO:0006909 3 0.016
amine metabolic process GO:0009308 2 0.016
nucleic acid transport GO:0050657 2 0.015
macromolecule localization GO:0033036 54 0.015
protein metabolic process GO:0019538 183 0.015
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.015
cellular response to extracellular stimulus GO:0031668 2 0.015
nucleocytoplasmic transport GO:0006913 4 0.015
negative regulation of cell differentiation GO:0045596 46 0.015
positive regulation of cellular component biogenesis GO:0044089 3 0.015
nuclear import GO:0051170 3 0.015
microtubule based process GO:0007017 60 0.015
Fly
ras protein signal transduction GO:0007265 7 0.014
positive regulation of chromosome organization GO:2001252 1 0.014
cell migration GO:0016477 237 0.014
cellular component morphogenesis GO:0032989 336 0.014
cell motility GO:0048870 244 0.014
negative regulation of rna biosynthetic process GO:1902679 45 0.014
alpha amino acid metabolic process GO:1901605 3 0.014
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.014
tube morphogenesis GO:0035239 349 0.014
cell projection organization GO:0030030 284 0.013
regulation of cellular component organization GO:0051128 86 0.013
striated muscle cell differentiation GO:0051146 129 0.013
positive regulation of cellular amine metabolic process GO:0033240 0 0.013
regulation of jak stat cascade GO:0046425 3 0.013
mrna processing GO:0006397 14 0.013
Mouse
primary neural tube formation GO:0014020 1 0.013
cellular response to nutrient levels GO:0031669 2 0.013
regulation of epidermis development GO:0045682 2 0.013
regulation of cell communication GO:0010646 232 0.012
growth GO:0040007 174 0.012
macromolecular complex assembly GO:0065003 35 0.012
stem cell maintenance GO:0019827 4 0.012
myofibril assembly GO:0030239 48 0.012
regulation of cellular amine metabolic process GO:0033238 0 0.012
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.012
stem cell differentiation GO:0048863 117 0.012
rna export from nucleus GO:0006405 1 0.012
epidermis development GO:0008544 48 0.012
mrna splicing via spliceosome GO:0000398 10 0.012
Mouse
mitotic cell cycle process GO:1903047 48 0.012
Fly
regulation of translational initiation GO:0006446 1 0.012
peptidyl lysine acetylation GO:0018394 2 0.012
nucleobase containing compound transport GO:0015931 2 0.012
microtubule cytoskeleton organization GO:0000226 33 0.012
Fly
protein complex assembly GO:0006461 30 0.011
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.011
regulation of programmed cell death GO:0043067 101 0.011
positive regulation of programmed cell death GO:0043068 29 0.011
positive regulation of gene expression GO:0010628 71 0.011
Mouse
cell fate commitment GO:0045165 99 0.011
cell morphogenesis GO:0000902 289 0.011
sequestering of calcium ion GO:0051208 3 0.011
positive regulation of developmental process GO:0051094 50 0.011
female gonad development GO:0008585 4 0.011
epithelial cell differentiation GO:0030855 116 0.011
cellular amine metabolic process GO:0044106 2 0.011
regulation of reproductive process GO:2000241 4 0.011
regulation of cellular amino acid metabolic process GO:0006521 0 0.011
nuclear division GO:0000280 23 0.011
rna modification GO:0009451 2 0.011
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.011
multicellular organismal reproductive process GO:0048609 35 0.011
negative regulation of ras protein signal transduction GO:0046580 1 0.011
oxoacid metabolic process GO:0043436 31 0.011
regulation of growth rate GO:0040009 1 0.011
intracellular mrna localization GO:0008298 1 0.010
small gtpase mediated signal transduction GO:0007264 8 0.010
transcription from rna polymerase ii promoter GO:0006366 80 0.010
single organism localization GO:1902578 225 0.010
regulation of cell proliferation GO:0042127 37 0.010
neuron projection development GO:0031175 180 0.010
regulation of epithelial cell proliferation GO:0050678 3 0.010
gland development GO:0048732 143 0.010
localization of cell GO:0051674 244 0.010
neurological system process GO:0050877 62 0.010

sf3b4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of metabolism DOID:0014667 0 0.011