Danio rerio

33 known processes

smarcd3b

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b

smarcd3b biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
determination of bilateral symmetry GO:0009855 204 0.506
determination of left right symmetry GO:0007368 179 0.385
specification of symmetry GO:0009799 204 0.281
cell projection morphogenesis GO:0048858 244 0.240
kupffer s vesicle development GO:0070121 50 0.174
larval development GO:0002164 2 0.157
Worm
embryonic organ morphogenesis GO:0048562 274 0.153
inner ear development GO:0048839 126 0.133
cell part morphogenesis GO:0032990 246 0.132
cellular component movement GO:0006928 335 0.131
regionalization GO:0003002 274 0.128
embryonic organ development GO:0048568 381 0.127
digestive tract development GO:0048565 265 0.121
morphogenesis of an epithelium GO:0002009 333 0.114
cilium morphogenesis GO:0060271 85 0.111
cell morphogenesis GO:0000902 289 0.103
determination of heart left right asymmetry GO:0061371 117 0.100
embryonic heart tube development GO:0035050 133 0.099
cell migration involved in gastrulation GO:0042074 79 0.097
digestive tract morphogenesis GO:0048546 231 0.097
vasculature development GO:0001944 278 0.089
sensory organ development GO:0007423 393 0.086
cell projection organization GO:0030030 284 0.086
Worm
cellular component morphogenesis GO:0032989 336 0.078
embryo development ending in birth or egg hatching GO:0009792 271 0.076
Worm
maintenance of location GO:0051235 4 0.073
ameboidal type cell migration GO:0001667 143 0.072
cell migration GO:0016477 237 0.069
response to wounding GO:0009611 116 0.069
peripheral nervous system development GO:0007422 55 0.066
regulation of signaling GO:0023051 235 0.066
cell surface receptor signaling pathway GO:0007166 325 0.065
epidermal cell fate specification GO:0009957 4 0.064
localization of cell GO:0051674 244 0.062
cell motility GO:0048870 244 0.061
digestive system development GO:0055123 289 0.061
epithelial tube morphogenesis GO:0060562 148 0.059
adult behavior GO:0030534 2 0.053
tube morphogenesis GO:0035239 349 0.053
transmission of nerve impulse GO:0019226 19 0.052
axonogenesis GO:0007409 152 0.052
positive regulation of catabolic process GO:0009896 4 0.050
neuron projection development GO:0031175 180 0.050
Worm
regulation of wound healing GO:0061041 2 0.049
nucleocytoplasmic transport GO:0006913 4 0.049
epithelial cell differentiation GO:0030855 116 0.048
aging GO:0007568 2 0.045
anterior posterior pattern specification GO:0009952 152 0.045
ear development GO:0043583 127 0.045
embryonic heart tube morphogenesis GO:0003143 108 0.043
heart development GO:0007507 313 0.042
pigmentation GO:0043473 85 0.042
chordate embryonic development GO:0043009 271 0.041
regulation of axonogenesis GO:0050770 32 0.041
hepaticobiliary system development GO:0061008 98 0.040
nitrogen compound metabolic process GO:0006807 319 0.040
developmental pigmentation GO:0048066 48 0.040
multicellular organismal signaling GO:0035637 22 0.039
cellular nitrogen compound metabolic process GO:0034641 290 0.039
endoderm development GO:0007492 49 0.039
mesenchyme development GO:0060485 127 0.039
regulation of response to stimulus GO:0048583 269 0.038
regulation of establishment of protein localization GO:0070201 4 0.037
compound eye development GO:0048749 2 0.037
regulation of multicellular organism growth GO:0040014 4 0.036
regulation of protein transport GO:0051223 3 0.036
cell projection assembly GO:0030031 64 0.035
heart looping GO:0001947 94 0.035
regulation of multicellular organismal development GO:2000026 223 0.035
Worm
positive regulation of biological process GO:0048518 253 0.035
Worm
signal transduction GO:0007165 455 0.035
protein import into nucleus GO:0006606 3 0.035
regulation of primary metabolic process GO:0080090 311 0.035
multicellular organism growth GO:0035264 4 0.034
epidermis development GO:0008544 48 0.034
blood vessel morphogenesis GO:0048514 216 0.033
protein targeting to nucleus GO:0044744 3 0.033
wound healing GO:0042060 90 0.033
regulation of protein targeting GO:1903533 2 0.033
retinoic acid receptor signaling pathway GO:0048384 16 0.032
embryonic skeletal system development GO:0048706 97 0.032
regulation of stem cell differentiation GO:2000736 4 0.032
nuclear transport GO:0051169 4 0.032
cellular response to chemical stimulus GO:0070887 157 0.032
gene expression GO:0010467 252 0.031
cellular amine metabolic process GO:0044106 2 0.031
regulation of cellular response to growth factor stimulus GO:0090287 35 0.031
convergent extension GO:0060026 118 0.031
growth GO:0040007 174 0.030
organic cyclic compound metabolic process GO:1901360 301 0.029
positive regulation of transport GO:0051050 2 0.029
somitogenesis GO:0001756 87 0.029
positive regulation of blood circulation GO:1903524 2 0.029
rna metabolic process GO:0016070 219 0.029
otic vesicle development GO:0071599 42 0.029
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.029
cilium organization GO:0044782 71 0.028
chemotaxis GO:0006935 104 0.028
cellular component assembly GO:0022607 170 0.027
amine metabolic process GO:0009308 2 0.027
regulation of reproductive process GO:2000241 4 0.027
epidermal cell differentiation GO:0009913 36 0.027
developmental growth GO:0048589 166 0.027
single organism nuclear import GO:1902593 3 0.026
macromolecule biosynthetic process GO:0009059 227 0.026
inner ear morphogenesis GO:0042472 63 0.026
single organism metabolic process GO:0044710 217 0.026
nuclear import GO:0051170 3 0.026
gastrulation GO:0007369 208 0.026
nucleobase containing compound metabolic process GO:0006139 274 0.026
protein localization to nucleus GO:0034504 3 0.026
axon ensheathment in central nervous system GO:0032291 2 0.025
head development GO:0060322 303 0.025
generation of neurons GO:0048699 385 0.025
Worm
mesoderm development GO:0007498 88 0.025
stem cell maintenance GO:0019827 4 0.025
brain development GO:0007420 293 0.025
regulation of membrane potential GO:0042391 23 0.025
peripheral nervous system neuron differentiation GO:0048934 28 0.025
ear morphogenesis GO:0042471 64 0.024
regulation of cell development GO:0060284 100 0.024
sensory organ morphogenesis GO:0090596 200 0.024
blood vessel development GO:0001568 246 0.024
regulation of nucleocytoplasmic transport GO:0046822 2 0.024
regulation of cellular biosynthetic process GO:0031326 245 0.024
central nervous system development GO:0007417 387 0.024
skin development GO:0043588 54 0.023
negative regulation of stem cell differentiation GO:2000737 2 0.023
positive regulation of cell cycle GO:0045787 3 0.023
bmp signaling pathway GO:0030509 52 0.023
regulation of cell differentiation GO:0045595 142 0.023
somite development GO:0061053 96 0.023
positive regulation of cellular catabolic process GO:0031331 3 0.023
regulation of cell activation GO:0050865 1 0.022
organic acid metabolic process GO:0006082 31 0.022
establishment of protein localization to organelle GO:0072594 4 0.022
regulation of neurogenesis GO:0050767 87 0.022
cellular response to endogenous stimulus GO:0071495 68 0.021
axis specification GO:0009798 43 0.021
guanosine containing compound catabolic process GO:1901069 2 0.021
heart jogging GO:0003146 40 0.021
regulation of hematopoietic progenitor cell differentiation GO:1901532 1 0.021
regulation of cellular amine metabolic process GO:0033238 0 0.021
enzyme linked receptor protein signaling pathway GO:0007167 106 0.020
negative regulation of biological process GO:0048519 304 0.020
Worm
epithelial cilium movement involved in determination of left right asymmetry GO:0060287 8 0.020
neuronal action potential GO:0019228 18 0.020
oxoacid metabolic process GO:0043436 31 0.020
immune system development GO:0002520 191 0.020
regulation of protein import into nucleus GO:0042306 2 0.020
embryonic skeletal system morphogenesis GO:0048704 93 0.020
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.019
biosynthetic process GO:0009058 294 0.019
ectodermal placode morphogenesis GO:0071697 32 0.019
regulation of gtp catabolic process GO:0033124 2 0.019
regulation of multicellular organismal process GO:0051239 277 0.019
Worm
response to external stimulus GO:0009605 264 0.019
stem cell proliferation GO:0072089 4 0.019
regulation of cytoplasmic transport GO:1903649 4 0.019
single organism localization GO:1902578 225 0.019
small molecule metabolic process GO:0044281 77 0.019
regulation of protein catabolic process GO:0042176 1 0.019
protein localization to plasma membrane GO:0072659 1 0.018
developmental growth involved in morphogenesis GO:0060560 86 0.018
regulation of myelination GO:0031641 1 0.018
skeletal system development GO:0001501 181 0.018
urogenital system development GO:0001655 97 0.018
connective tissue development GO:0061448 99 0.018
dorsal ventral pattern formation GO:0009953 125 0.018
cell growth GO:0016049 57 0.018
positive regulation of response to stimulus GO:0048584 80 0.018
otic vesicle morphogenesis GO:0071600 34 0.018
otic placode formation GO:0043049 23 0.018
rna biosynthetic process GO:0032774 181 0.018
carboxylic acid metabolic process GO:0019752 22 0.018
female sex differentiation GO:0046660 4 0.018
regulation of localization GO:0032879 104 0.018
lipid storage GO:0019915 1 0.018
regulation of cell communication GO:0010646 232 0.018
locomotion GO:0040011 313 0.017
Worm
response to chemical GO:0042221 320 0.017
striated muscle tissue development GO:0014706 110 0.017
positive regulation of jnk cascade GO:0046330 3 0.017
cellular response to growth factor stimulus GO:0071363 39 0.017
protein import GO:0017038 3 0.017
mesoderm morphogenesis GO:0048332 51 0.017
regulation of rna metabolic process GO:0051252 224 0.017
regulation of glial cell differentiation GO:0045685 4 0.017
mechanoreceptor differentiation GO:0042490 37 0.017
heart morphogenesis GO:0003007 156 0.017
transcription from rna polymerase ii promoter GO:0006366 80 0.017
leukocyte proliferation GO:0070661 1 0.017
transcription from rna polymerase iii promoter GO:0006383 1 0.017
central nervous system myelination GO:0022010 2 0.017
single organism organelle organization GO:1902589 199 0.017
otic vesicle formation GO:0030916 27 0.017
regulation of signal transduction GO:0009966 225 0.017
carboxylic acid catabolic process GO:0046395 3 0.016
endoderm formation GO:0001706 29 0.016
response to stress GO:0006950 263 0.016
specification of axis polarity GO:0065001 4 0.016
organelle organization GO:0006996 227 0.016
positive regulation of muscle tissue development GO:1901863 1 0.016
tissue regeneration GO:0042246 74 0.016
regulation of protein localization to nucleus GO:1900180 2 0.016
protein metabolic process GO:0019538 183 0.016
regulation of gtpase activity GO:0043087 2 0.016
cellular protein catabolic process GO:0044257 4 0.016
regulation of protein localization to plasma membrane GO:1903076 1 0.016
keratinocyte differentiation GO:0030216 0 0.016
eye development GO:0001654 277 0.016
regulation of metabolic process GO:0019222 359 0.016
organic acid catabolic process GO:0016054 3 0.016
astrocyte differentiation GO:0048708 1 0.016
positive regulation of striated muscle tissue development GO:0045844 1 0.016
regulation of catenin import into nucleus GO:0035412 2 0.015
positive regulation of nucleotide catabolic process GO:0030813 1 0.015
regulation of cytokine production GO:0001817 3 0.015
response to growth factor GO:0070848 39 0.015
phagocytosis GO:0006909 3 0.015
cell morphogenesis involved in differentiation GO:0000904 195 0.015
transmembrane receptor protein serine threonine kinase signaling pathway GO:0007178 68 0.015
system process GO:0003008 185 0.015
liver development GO:0001889 96 0.015
small molecule catabolic process GO:0044282 3 0.015
cellular aromatic compound metabolic process GO:0006725 295 0.015
multicellular organismal metabolic process GO:0044236 2 0.015
phagocytosis engulfment GO:0006911 1 0.015
negative regulation of protein transport GO:0051224 3 0.015
immune system process GO:0002376 241 0.015
regulation of cellular amino acid metabolic process GO:0006521 0 0.015
cellular component biogenesis GO:0044085 178 0.015
cilium assembly GO:0042384 58 0.015
stem cell fate commitment GO:0048865 1 0.015
axon guidance GO:0007411 86 0.015
regeneration GO:0031099 91 0.015
establishment of localization GO:0051234 244 0.015
Worm
startle response GO:0001964 4 0.015
regulation of biological quality GO:0065008 263 0.015
hair cell differentiation GO:0035315 32 0.014
regulation of intracellular protein transport GO:0033157 3 0.014
wnt signaling pathway GO:0016055 80 0.014
internal protein amino acid acetylation GO:0006475 2 0.014
negative regulation of cytoplasmic transport GO:1903650 2 0.014
regulation of extent of cell growth GO:0061387 29 0.014
epithelial cilium movement GO:0003351 15 0.014
action potential GO:0001508 19 0.014
regulation of immune system process GO:0002682 34 0.014
cell adhesion mediated by integrin GO:0033627 1 0.014
extrinsic apoptotic signaling pathway GO:0097191 3 0.014
regulation of nervous system development GO:0051960 90 0.014
regulation of cysteine type endopeptidase activity GO:2000116 21 0.014
regulation of rho protein signal transduction GO:0035023 2 0.014
forebrain development GO:0030900 96 0.014
negative regulation of protein localization to nucleus GO:1900181 2 0.014
regulation of cell morphogenesis involved in differentiation GO:0010769 38 0.013
regulation of neural precursor cell proliferation GO:2000177 3 0.013
mononuclear cell proliferation GO:0032943 1 0.013
taxis GO:0042330 109 0.013
camera type eye development GO:0043010 222 0.013
gtp catabolic process GO:0006184 2 0.013
nose development GO:0043584 3 0.013
heterocycle metabolic process GO:0046483 290 0.013
b cell activation GO:0042113 2 0.013
organonitrogen compound metabolic process GO:1901564 74 0.013
rho protein signal transduction GO:0007266 5 0.013
posterior lateral line system development GO:0048915 46 0.013
negative regulation of intracellular transport GO:0032387 3 0.013
regulation of microtubule cytoskeleton organization GO:0070507 3 0.013
cellular macromolecule metabolic process GO:0044260 391 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
regulation of bmp signaling pathway GO:0030510 39 0.013
negative regulation of catabolic process GO:0009895 3 0.013
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.013
transcription dna templated GO:0006351 181 0.013
cellular amino acid metabolic process GO:0006520 7 0.013
guanosine containing compound metabolic process GO:1901068 4 0.013
regulation of establishment of planar polarity GO:0090175 4 0.013
regulation of binding GO:0051098 3 0.013
regulation of skeletal muscle tissue development GO:0048641 4 0.013
immunoglobulin mediated immune response GO:0016064 3 0.013
neural tube development GO:0021915 62 0.013
positive regulation of map kinase activity GO:0043406 3 0.013
formation of primary germ layer GO:0001704 62 0.013
negative regulation of reproductive process GO:2000242 3 0.013
regulation of circadian rhythm GO:0042752 4 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.013
regulation of nucleotide catabolic process GO:0030811 2 0.013
glial cell migration GO:0008347 3 0.013
membrane invagination GO:0010324 1 0.012
cell migration involved in heart development GO:0060973 22 0.012
axon development GO:0061564 166 0.012
Worm
organelle assembly GO:0070925 110 0.012
positive regulation of cellular process GO:0048522 201 0.012
cellular ketone metabolic process GO:0042180 11 0.012
cellular modified amino acid metabolic process GO:0006575 3 0.012
kidney development GO:0001822 92 0.012
regulation of epidermis development GO:0045682 2 0.012
regulation of embryonic development GO:0045995 47 0.012
neuron development GO:0048666 262 0.012
Worm
regulation of anatomical structure morphogenesis GO:0022603 130 0.012
response to endogenous stimulus GO:0009719 83 0.012
regulation of myotube differentiation GO:0010830 2 0.012
mitochondrion organization GO:0007005 4 0.012
negative regulation of gene expression GO:0010629 65 0.012
embryonic cranial skeleton morphogenesis GO:0048701 90 0.012
calcium mediated signaling GO:0019722 2 0.012
foregut morphogenesis GO:0007440 4 0.012
regulation of rna biosynthetic process GO:2001141 213 0.012
sensory system development GO:0048880 76 0.012
cellular biosynthetic process GO:0044249 286 0.012
cellular nitrogen compound biosynthetic process GO:0044271 218 0.012
cellular lipid catabolic process GO:0044242 3 0.012
positive regulation of nucleoside metabolic process GO:0045979 1 0.012
positive regulation of cell activation GO:0050867 1 0.012
secondary metabolic process GO:0019748 3 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.012
regulation of cellular metabolic process GO:0031323 320 0.012
oligodendrocyte differentiation GO:0048709 23 0.012
cellular protein metabolic process GO:0044267 129 0.012
regulation of cellular component movement GO:0051270 55 0.012
morphogenesis of an epithelial sheet GO:0002011 49 0.011
negative regulation of muscle cell differentiation GO:0051148 1 0.011
protein stabilization GO:0050821 2 0.011
regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090092 50 0.011
endothelial cell fate commitment GO:0060839 3 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.011
positive regulation of cellular component biogenesis GO:0044089 3 0.011
regulation of stem cell proliferation GO:0072091 2 0.011
ensheathment of neurons GO:0007272 18 0.011
aorta development GO:0035904 4 0.011
positive regulation of cyclin dependent protein serine threonine kinase activity GO:0045737 1 0.011
centrosome cycle GO:0007098 1 0.011
neuron projection guidance GO:0097485 86 0.011
response to uv GO:0009411 3 0.011
cell substrate adhesion GO:0031589 4 0.011
appendage morphogenesis GO:0035107 56 0.011
nucleobase containing compound biosynthetic process GO:0034654 205 0.011
positive regulation of cellular amine metabolic process GO:0033240 0 0.011
regulation of purine nucleotide catabolic process GO:0033121 2 0.011
cellular component disassembly GO:0022411 1 0.011
negative regulation of gliogenesis GO:0014014 1 0.011
cellular monovalent inorganic cation homeostasis GO:0030004 2 0.011
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.011
synaptic vesicle localization GO:0097479 1 0.011
b cell mediated immunity GO:0019724 3 0.011
melanin metabolic process GO:0006582 2 0.011
response to hexose GO:0009746 3 0.011
regulation of locomotion GO:0040012 55 0.011
regulation of cardiac muscle tissue development GO:0055024 1 0.011
neuron projection morphogenesis GO:0048812 161 0.011
glial cell differentiation GO:0010001 42 0.011
hematopoietic or lymphoid organ development GO:0048534 191 0.011
lateral line system development GO:0048925 76 0.011
neurological system process GO:0050877 62 0.010
hormone transport GO:0009914 2 0.010
lymphocyte proliferation GO:0046651 1 0.010
embryonic limb morphogenesis GO:0030326 2 0.010
cellular component assembly involved in morphogenesis GO:0010927 107 0.010
positive regulation of secretion GO:0051047 1 0.010
embryonic skeletal joint development GO:0072498 3 0.010
axon extension GO:0048675 45 0.010
regulation of cellular ketone metabolic process GO:0010565 7 0.010
homeostatic process GO:0042592 142 0.010
positive regulation of cell adhesion GO:0045785 1 0.010

smarcd3b disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.053
musculoskeletal system disease DOID:17 0 0.035
connective tissue disease DOID:65 0 0.035
cancer DOID:162 0 0.021
disease of cellular proliferation DOID:14566 0 0.021
organ system cancer DOID:0050686 0 0.021
bone disease DOID:0080001 0 0.021
nervous system disease DOID:863 0 0.016