Danio rerio

0 known processes

scfd2

sec1 family domain containing 2

(Aliases: si:dkey-161n17.2,MGC110750,zgc:110750)

scfd2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
embryonic organ development GO:0048568 381 0.097
signal transduction GO:0007165 455 0.078
aging GO:0007568 2 0.076
nitrogen compound metabolic process GO:0006807 319 0.072
regulation of multicellular organism growth GO:0040014 4 0.059
tube morphogenesis GO:0035239 349 0.055
sensory organ development GO:0007423 393 0.055
central nervous system development GO:0007417 387 0.053
regulation of signaling GO:0023051 235 0.053
positive regulation of cell cycle GO:0045787 3 0.052
organic cyclic compound metabolic process GO:1901360 301 0.052
cellular aromatic compound metabolic process GO:0006725 295 0.051
regulation of biological quality GO:0065008 263 0.050
nucleobase containing compound metabolic process GO:0006139 274 0.050
response to chemical GO:0042221 320 0.050
centrosome organization GO:0051297 1 0.048
lipid storage GO:0019915 1 0.048
maintenance of location GO:0051235 4 0.048
multicellular organism growth GO:0035264 4 0.047
microtubule organizing center organization GO:0031023 1 0.047
organic substance biosynthetic process GO:1901576 289 0.046
regulation of gene expression GO:0010468 265 0.043
regulation of biosynthetic process GO:0009889 250 0.043
developmental programmed cell death GO:0010623 4 0.043
regulation of macromolecule metabolic process GO:0060255 317 0.043
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.043
single organism metabolic process GO:0044710 217 0.042
regulation of protein targeting GO:1903533 2 0.041
regulation of intracellular protein transport GO:0033157 3 0.040
heterocycle biosynthetic process GO:0018130 215 0.039
head development GO:0060322 303 0.039
heterocycle metabolic process GO:0046483 290 0.038
regulation of nitrogen compound metabolic process GO:0051171 251 0.038
carboxylic acid metabolic process GO:0019752 22 0.038
regulation of cell communication GO:0010646 232 0.038
modification dependent protein catabolic process GO:0019941 3 0.038
regulation of protein transport GO:0051223 3 0.037
cellular nitrogen compound metabolic process GO:0034641 290 0.037
regulation of primary metabolic process GO:0080090 311 0.035
eye development GO:0001654 277 0.035
proteasomal protein catabolic process GO:0010498 2 0.035
nuclear transport GO:0051169 4 0.035
nuclear import GO:0051170 3 0.034
stem cell maintenance GO:0019827 4 0.034
regionalization GO:0003002 274 0.034
skeletal system development GO:0001501 181 0.033
heart development GO:0007507 313 0.033
negative regulation of biological process GO:0048519 304 0.033
female sex differentiation GO:0046660 4 0.033
centrosome cycle GO:0007098 1 0.032
organic acid metabolic process GO:0006082 31 0.032
cellular macromolecule metabolic process GO:0044260 391 0.032
nucleic acid metabolic process GO:0090304 244 0.032
regulation of multicellular organismal development GO:2000026 223 0.032
nucleocytoplasmic transport GO:0006913 4 0.032
phagocytosis GO:0006909 3 0.032
system process GO:0003008 185 0.031
regulation of transcription dna templated GO:0006355 213 0.031
regulation of developmental process GO:0050793 247 0.031
regulation of establishment of protein localization GO:0070201 4 0.031
negative regulation of ras protein signal transduction GO:0046580 1 0.031
cognition GO:0050890 1 0.031
regulation of cellular biosynthetic process GO:0031326 245 0.030
larval development GO:0002164 2 0.030
transcription dna templated GO:0006351 181 0.030
regulation of cellular metabolic process GO:0031323 320 0.030
regulation of rna metabolic process GO:0051252 224 0.030
positive regulation of cellular component biogenesis GO:0044089 3 0.029
cellular nitrogen compound biosynthetic process GO:0044271 218 0.029
response to stress GO:0006950 263 0.029
pyruvate metabolic process GO:0006090 1 0.028
protein acetylation GO:0006473 2 0.028
organonitrogen compound metabolic process GO:1901564 74 0.028
regulation of cell activation GO:0050865 1 0.028
cellular protein modification process GO:0006464 100 0.027
positive regulation of cellular process GO:0048522 201 0.027
regulation of nucleocytoplasmic transport GO:0046822 2 0.027
tissue remodeling GO:0048771 4 0.027
modification dependent macromolecule catabolic process GO:0043632 3 0.027
small molecule metabolic process GO:0044281 77 0.027
internal peptidyl lysine acetylation GO:0018393 2 0.026
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.026
internal protein amino acid acetylation GO:0006475 2 0.026
regulation of rna biosynthetic process GO:2001141 213 0.026
cellular response to nutrient levels GO:0031669 2 0.026
response to carbohydrate GO:0009743 3 0.026
ubiquitin dependent protein catabolic process GO:0006511 3 0.025
regulation of macromolecule biosynthetic process GO:0010556 225 0.025
transport GO:0006810 220 0.025
protein localization to nucleus GO:0034504 3 0.025
immune system process GO:0002376 241 0.025
erk1 and erk2 cascade GO:0070371 4 0.025
regulation of reproductive process GO:2000241 4 0.025
protein import into nucleus GO:0006606 3 0.024
regulation of protein localization to nucleus GO:1900180 2 0.024
morphogenesis of an epithelium GO:0002009 333 0.024
protein modification process GO:0036211 100 0.024
oxoacid metabolic process GO:0043436 31 0.024
regulation of protein import into nucleus GO:0042306 2 0.024
cellular response to starvation GO:0009267 1 0.024
regulation of cytoplasmic transport GO:1903649 4 0.024
regulation of multicellular organismal process GO:0051239 277 0.023
protein targeting to nucleus GO:0044744 3 0.023
establishment of protein localization to organelle GO:0072594 4 0.023
regulation of cytokine production GO:0001817 3 0.023
brain development GO:0007420 293 0.023
positive regulation of immune effector process GO:0002699 3 0.023
positive regulation of biological process GO:0048518 253 0.023
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.023
response to organic substance GO:0010033 153 0.023
single organism nuclear import GO:1902593 3 0.023
cellular response to external stimulus GO:0071496 2 0.022
female gonad development GO:0008585 4 0.022
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.022
nucleic acid templated transcription GO:0097659 181 0.022
camera type eye development GO:0043010 222 0.022
peptidyl lysine acetylation GO:0018394 2 0.022
cellular amine metabolic process GO:0044106 2 0.022
embryo development ending in birth or egg hatching GO:0009792 271 0.022
regulation of metal ion transport GO:0010959 4 0.022
rna metabolic process GO:0016070 219 0.022
negative regulation of response to cytokine stimulus GO:0060761 2 0.021
organic cyclic compound biosynthetic process GO:1901362 223 0.021
positive regulation of transport GO:0051050 2 0.021
protein import GO:0017038 3 0.021
regulation of apoptotic process GO:0042981 98 0.021
macromolecule biosynthetic process GO:0009059 227 0.021
regulation of erk1 and erk2 cascade GO:0070372 4 0.021
synaptic vesicle transport GO:0048489 1 0.020
apoptotic process involved in development GO:1902742 2 0.020
negative regulation of protein phosphorylation GO:0001933 4 0.020
kidney development GO:0001822 92 0.020
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.020
phosphorus metabolic process GO:0006793 109 0.020
protein metabolic process GO:0019538 183 0.020
positive regulation of cytoskeleton organization GO:0051495 3 0.020
negative regulation of protein transport GO:0051224 3 0.020
amine metabolic process GO:0009308 2 0.019
neurotransmitter secretion GO:0007269 2 0.019
positive regulation of cellular catabolic process GO:0031331 3 0.019
hormone transport GO:0009914 2 0.019
leukocyte proliferation GO:0070661 1 0.019
cellular protein catabolic process GO:0044257 4 0.019
guanosine containing compound catabolic process GO:1901069 2 0.019
response to glucocorticoid GO:0051384 1 0.019
positive regulation of biosynthetic process GO:0009891 68 0.019
biosynthetic process GO:0009058 294 0.018
renal system development GO:0072001 94 0.018
cellular ketone metabolic process GO:0042180 11 0.018
i kappab kinase nf kappab signaling GO:0007249 4 0.018
peptide transport GO:0015833 1 0.018
phosphate containing compound metabolic process GO:0006796 108 0.018
negative regulation of signaling GO:0023057 96 0.018
stem cell differentiation GO:0048863 117 0.018
gene expression GO:0010467 252 0.018
aromatic compound biosynthetic process GO:0019438 217 0.018
regulation of protein complex assembly GO:0043254 3 0.018
anterior posterior pattern specification GO:0009952 152 0.018
response to topologically incorrect protein GO:0035966 2 0.018
rna biosynthetic process GO:0032774 181 0.018
regulation of hormone secretion GO:0046883 2 0.017
single organism localization GO:1902578 225 0.017
negative regulation of multicellular organismal process GO:0051241 69 0.017
dna templated transcription elongation GO:0006354 3 0.017
cellular response to extracellular stimulus GO:0031668 2 0.017
regulation of cellular ketone metabolic process GO:0010565 7 0.017
regulation of cellular amine metabolic process GO:0033238 0 0.017
secondary metabolic process GO:0019748 3 0.017
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.017
hormone secretion GO:0046879 2 0.017
monoamine transport GO:0015844 1 0.017
positive regulation of catabolic process GO:0009896 4 0.017
guanosine containing compound metabolic process GO:1901068 4 0.016
positive regulation of nucleotide catabolic process GO:0030813 1 0.016
neurotransmitter transport GO:0006836 2 0.016
regulation of cellular amino acid metabolic process GO:0006521 0 0.016
cellular component movement GO:0006928 335 0.016
negative regulation of protein kinase activity GO:0006469 4 0.016
cell fate commitment GO:0045165 99 0.016
dorsal ventral pattern formation GO:0009953 125 0.016
regulation of carbohydrate metabolic process GO:0006109 4 0.016
death GO:0016265 121 0.016
cell surface receptor signaling pathway GO:0007166 325 0.016
alpha amino acid metabolic process GO:1901605 3 0.016
actin polymerization or depolymerization GO:0008154 2 0.015
nucleobase containing compound biosynthetic process GO:0034654 205 0.015
digestive system development GO:0055123 289 0.015
negative regulation of macromolecule metabolic process GO:0010605 76 0.015
gtp metabolic process GO:0046039 4 0.015
response to monosaccharide GO:0034284 3 0.015
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.015
centrosome duplication GO:0051298 1 0.015
single organism organelle organization GO:1902589 199 0.015
regulation of cell death GO:0010941 103 0.015
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.015
membrane invagination GO:0010324 1 0.015
cellular carbohydrate metabolic process GO:0044262 4 0.015
regulation of nucleotide catabolic process GO:0030811 2 0.015
lymphocyte proliferation GO:0046651 1 0.015
negative regulation of nuclear division GO:0051784 3 0.015
establishment of localization GO:0051234 244 0.015
cellular amino acid metabolic process GO:0006520 7 0.015
embryonic cranial skeleton morphogenesis GO:0048701 90 0.015
regulation of dna templated transcription elongation GO:0032784 3 0.015
regulation of nucleic acid templated transcription GO:1903506 213 0.015
negative regulation of intracellular transport GO:0032387 3 0.015
regulation of jak stat cascade GO:0046425 3 0.015
transcription from rna polymerase ii promoter GO:0006366 80 0.015
skeletal system morphogenesis GO:0048705 102 0.014
embryonic skeletal system development GO:0048706 97 0.014
exocytosis GO:0006887 1 0.014
regulation of nucleoside metabolic process GO:0009118 2 0.014
cellular response to unfolded protein GO:0034620 2 0.014
stem cell development GO:0048864 82 0.014
protein acylation GO:0043543 3 0.014
positive regulation of signaling GO:0023056 56 0.014
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.014
programmed cell death GO:0012501 119 0.014
establishment of synaptic vesicle localization GO:0097480 1 0.014
wnt signaling pathway GO:0016055 80 0.014
organelle organization GO:0006996 227 0.014
regulation of sequestering of calcium ion GO:0051282 4 0.014
regulation of synapse assembly GO:0051963 3 0.014
specification of symmetry GO:0009799 204 0.014
adult behavior GO:0030534 2 0.014
retina development in camera type eye GO:0060041 146 0.014
positive regulation of cell communication GO:0010647 56 0.014
negative regulation of cytoplasmic transport GO:1903650 2 0.014
regulation of receptor activity GO:0010469 2 0.013
positive regulation of nucleoside metabolic process GO:0045979 1 0.013
alcohol biosynthetic process GO:0046165 2 0.013
regulation of response to stimulus GO:0048583 269 0.013
chordate embryonic development GO:0043009 271 0.013
negative regulation of cellular catabolic process GO:0031330 3 0.013
ear development GO:0043583 127 0.013
negative regulation of kinase activity GO:0033673 4 0.013
muscle structure development GO:0061061 196 0.013
regulation of protein ubiquitination GO:0031396 3 0.013
regulation of mrna processing GO:0050684 3 0.013
immune system development GO:0002520 191 0.013
stem cell proliferation GO:0072089 4 0.013
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.013
sensory organ morphogenesis GO:0090596 200 0.013
cell death GO:0008219 121 0.013
regulation of signal transduction GO:0009966 225 0.013
generation of neurons GO:0048699 385 0.013
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.013
immune response GO:0006955 28 0.013
actin filament polymerization GO:0030041 2 0.013
neuromuscular synaptic transmission GO:0007274 2 0.013
cellular response to chemical stimulus GO:0070887 157 0.013
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.013
mononuclear cell proliferation GO:0032943 1 0.012
regulation of immune system process GO:0002682 34 0.012
chemosensory behavior GO:0007635 1 0.012
cell part morphogenesis GO:0032990 246 0.012
alternative mrna splicing via spliceosome GO:0000380 1 0.012
regulation of purine nucleotide catabolic process GO:0033121 2 0.012
regulation of synaptic plasticity GO:0048167 1 0.012
embryonic organ morphogenesis GO:0048562 274 0.012
positive regulation of cell adhesion GO:0045785 1 0.012
sensory system development GO:0048880 76 0.012
negative regulation of immune response GO:0050777 2 0.012
hemopoiesis GO:0030097 183 0.012
meiosis ii GO:0007135 1 0.012
synaptic vesicle localization GO:0097479 1 0.012
negative regulation of cell communication GO:0010648 96 0.012
rna localization GO:0006403 4 0.012
b cell activation GO:0042113 2 0.012
regulation of dna replication GO:0006275 3 0.012
hepaticobiliary system development GO:0061008 98 0.012
negative regulation of secretion GO:0051048 2 0.012
protein polymerization GO:0051258 4 0.012
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.012
cellular protein metabolic process GO:0044267 129 0.012
cellular macromolecule biosynthetic process GO:0034645 224 0.012
regulation of cell differentiation GO:0045595 142 0.012
pathway restricted smad protein phosphorylation GO:0060389 1 0.012
regulation of gtp catabolic process GO:0033124 2 0.012
cellular response to organic substance GO:0071310 105 0.012
cellular response to topologically incorrect protein GO:0035967 2 0.012
angiogenesis GO:0001525 158 0.011
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.011
positive regulation of cellular amine metabolic process GO:0033240 0 0.011
negative regulation of leukocyte differentiation GO:1902106 1 0.011
wound healing GO:0042060 90 0.011
macromolecule modification GO:0043412 111 0.011
antimicrobial humoral response GO:0019730 2 0.011
inner ear development GO:0048839 126 0.011
regulation of cell shape GO:0008360 1 0.011
single organism biosynthetic process GO:0044711 71 0.011
regulation of protein polymerization GO:0032271 2 0.011
single organism transport GO:0044765 206 0.011
response to uv GO:0009411 3 0.011
lateral line development GO:0048882 66 0.011
regulation of inflammatory response GO:0050727 2 0.011
circadian sleep wake cycle sleep GO:0050802 1 0.011
autophagy GO:0006914 4 0.011
negative regulation of secretion by cell GO:1903531 2 0.011
regulation of programmed cell death GO:0043067 101 0.011
regulation of transporter activity GO:0032409 2 0.011
response to corticosteroid GO:0031960 1 0.011
negative regulation of cellular process GO:0048523 283 0.011
vasculature development GO:0001944 278 0.011
regulation of stem cell differentiation GO:2000736 4 0.011
phagocytosis engulfment GO:0006911 1 0.011
phospholipase c activating g protein coupled receptor signaling pathway GO:0007200 2 0.011
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.011
regulation of ion transmembrane transporter activity GO:0032412 2 0.011
cellular component biogenesis GO:0044085 178 0.011
positive regulation of metabolic process GO:0009893 108 0.011
locomotor rhythm GO:0045475 3 0.011
regulation of binding GO:0051098 3 0.011
gas transport GO:0015669 3 0.011
response to hexose GO:0009746 3 0.011
regulation of gtpase activity GO:0043087 2 0.011
segmentation GO:0035282 97 0.011
response to other organism GO:0051707 97 0.011
regulation of transmembrane transporter activity GO:0022898 2 0.011
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.011
urogenital system development GO:0001655 97 0.011
negative regulation of catabolic process GO:0009895 3 0.011
regulation of response to nutrient levels GO:0032107 1 0.011
positive regulation of cytokine production GO:0001819 2 0.010
b cell differentiation GO:0030183 1 0.010
meiotic nuclear division GO:0007126 4 0.010
endoplasmic reticulum unfolded protein response GO:0030968 2 0.010
regulation of cytokine mediated signaling pathway GO:0001959 3 0.010
regulation of oocyte development GO:0060281 3 0.010
carbohydrate homeostasis GO:0033500 1 0.010
protein heterooligomerization GO:0051291 1 0.010
somatic stem cell maintenance GO:0035019 1 0.010
positive regulation of gene expression GO:0010628 71 0.010
multi organism process GO:0051704 134 0.010
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.010
apoptotic process involved in morphogenesis GO:0060561 2 0.010
regulation of stem cell proliferation GO:0072091 2 0.010
negative regulation of metabolic process GO:0009892 86 0.010
positive regulation of protein complex assembly GO:0031334 2 0.010
sensory perception of pain GO:0019233 1 0.010

scfd2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 0 0.021
disease of anatomical entity DOID:7 0 0.021
disease of metabolism DOID:0014667 0 0.017
cancer DOID:162 0 0.013
organ system cancer DOID:0050686 0 0.013
inherited metabolic disorder DOID:655 0 0.010