Danio rerio

56 known processes

lrrc39

leucine rich repeat containing 39

(Aliases: zgc:112088)

lrrc39 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.141
aging GO:0007568 2 0.101
regulation of neural precursor cell proliferation GO:2000177 3 0.078
multicellular organism growth GO:0035264 4 0.047
maintenance of location GO:0051235 4 0.047
phagocytosis GO:0006909 3 0.047
regulation of muscle contraction GO:0006937 3 0.041
positive regulation of cell cycle GO:0045787 3 0.041
biosynthetic process GO:0009058 294 0.040
signal transduction GO:0007165 455 0.038
stem cell proliferation GO:0072089 4 0.036
positive regulation of transport GO:0051050 2 0.036
cognition GO:0050890 1 0.035
regulation of multicellular organism growth GO:0040014 4 0.035
cellular aromatic compound metabolic process GO:0006725 295 0.034
organic cyclic compound metabolic process GO:1901360 301 0.034
nitrogen compound metabolic process GO:0006807 319 0.033
cellular nitrogen compound metabolic process GO:0034641 290 0.032
lipid storage GO:0019915 1 0.032
tissue remodeling GO:0048771 4 0.031
regulation of stem cell proliferation GO:0072091 2 0.029
organonitrogen compound metabolic process GO:1901564 74 0.028
nucleobase containing compound metabolic process GO:0006139 274 0.028
amine metabolic process GO:0009308 2 0.028
heterocycle metabolic process GO:0046483 290 0.028
phagocytosis engulfment GO:0006911 1 0.027
cellular biosynthetic process GO:0044249 286 0.027
regulation of metabolic process GO:0019222 359 0.027
locomotion GO:0040011 313 0.026
membrane invagination GO:0010324 1 0.026
regulation of mrna splicing via spliceosome GO:0048024 3 0.026
single organism metabolic process GO:0044710 217 0.026
response to stress GO:0006950 263 0.026
regulation of multicellular organismal process GO:0051239 277 0.025
cellular respiration GO:0045333 3 0.025
organic substance biosynthetic process GO:1901576 289 0.025
system process GO:0003008 185 0.025
embryonic organ development GO:0048568 381 0.025
regulation of cytokine production GO:0001817 3 0.025
tube morphogenesis GO:0035239 349 0.025
regulation of signaling GO:0023051 235 0.025
neuroblast proliferation GO:0007405 2 0.025
organic cyclic compound biosynthetic process GO:1901362 223 0.025
nuclear transport GO:0051169 4 0.024
establishment of localization GO:0051234 244 0.024
actin polymerization or depolymerization GO:0008154 2 0.024
cellular macromolecule metabolic process GO:0044260 391 0.024
regulation of response to stimulus GO:0048583 269 0.024
positive regulation of catabolic process GO:0009896 4 0.023
regionalization GO:0003002 274 0.023
regulation of mrna processing GO:0050684 3 0.023
calcium ion transport into cytosol GO:0060402 3 0.023
synaptic growth at neuromuscular junction GO:0051124 2 0.023
response to chemical GO:0042221 320 0.023
single organism nuclear import GO:1902593 3 0.023
cell surface receptor signaling pathway GO:0007166 325 0.023
modification dependent protein catabolic process GO:0019941 3 0.023
cell migration GO:0016477 237 0.023
cell matrix adhesion GO:0007160 4 0.023
cellular component movement GO:0006928 335 0.023
digestive system development GO:0055123 289 0.022
single organism localization GO:1902578 225 0.022
regulation of cell shape GO:0008360 1 0.022
adult behavior GO:0030534 2 0.022
meiotic nuclear division GO:0007126 4 0.022
gtp catabolic process GO:0006184 2 0.022
positive regulation of cellular component biogenesis GO:0044089 3 0.022
cellular response to external stimulus GO:0071496 2 0.021
regulation of cell communication GO:0010646 232 0.021
cellular component disassembly GO:0022411 1 0.021
oxoacid metabolic process GO:0043436 31 0.021
regulation of cellular amino acid metabolic process GO:0006521 0 0.020
small molecule metabolic process GO:0044281 77 0.020
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.020
gene expression GO:0010467 252 0.020
protein metabolic process GO:0019538 183 0.020
neurotransmitter secretion GO:0007269 2 0.020
sequestering of metal ion GO:0051238 3 0.020
regulation of cellular amine metabolic process GO:0033238 0 0.020
carboxylic acid metabolic process GO:0019752 22 0.020
positive regulation of cytokine production GO:0001819 2 0.020
regulation of developmental process GO:0050793 247 0.020
cytosolic calcium ion transport GO:0060401 3 0.020
synaptic transmission cholinergic GO:0007271 4 0.020
localization of cell GO:0051674 244 0.020
cellular response to extracellular stimulus GO:0031668 2 0.020
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.020
establishment of protein localization to organelle GO:0072594 4 0.020
nucleoside monophosphate catabolic process GO:0009125 4 0.020
spermatid development GO:0007286 2 0.019
regulation of tube size GO:0035150 2 0.019
cellular carbohydrate metabolic process GO:0044262 4 0.019
spermatid differentiation GO:0048515 2 0.019
neurotransmitter transport GO:0006836 2 0.019
organelle assembly GO:0070925 110 0.019
single organism transport GO:0044765 206 0.019
protein complex disassembly GO:0043241 1 0.019
amino acid transport GO:0006865 2 0.018
organic acid metabolic process GO:0006082 31 0.018
regulation of primary metabolic process GO:0080090 311 0.018
transport GO:0006810 220 0.018
cellular amino acid metabolic process GO:0006520 7 0.018
chemosensory behavior GO:0007635 1 0.018
cellular ketone metabolic process GO:0042180 11 0.018
central nervous system development GO:0007417 387 0.018
cellular amine metabolic process GO:0044106 2 0.018
regulation of macromolecule metabolic process GO:0060255 317 0.018
cellular protein catabolic process GO:0044257 4 0.018
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.018
cellular component biogenesis GO:0044085 178 0.018
growth GO:0040007 174 0.018
regulation of biological quality GO:0065008 263 0.018
positive regulation of cellular catabolic process GO:0031331 3 0.018
regulation of sequestering of calcium ion GO:0051282 4 0.018
regulation of cytoplasmic transport GO:1903649 4 0.018
anterior posterior pattern specification GO:0009952 152 0.018
response to drug GO:0042493 3 0.018
regulation of cellular metabolic process GO:0031323 320 0.018
response to external stimulus GO:0009605 264 0.018
positive regulation of biological process GO:0048518 253 0.018
purine nucleoside monophosphate catabolic process GO:0009128 4 0.017
cellular response to chemical stimulus GO:0070887 157 0.017
cell morphogenesis GO:0000902 289 0.017
leukocyte proliferation GO:0070661 1 0.017
vasculature development GO:0001944 278 0.017
nucleic acid metabolic process GO:0090304 244 0.017
regulation of signal transduction GO:0009966 225 0.017
regulation of organelle assembly GO:1902115 4 0.017
sequestering of calcium ion GO:0051208 3 0.017
sleep GO:0030431 1 0.017
regulation of biosynthetic process GO:0009889 250 0.017
heterocycle biosynthetic process GO:0018130 215 0.017
rna localization GO:0006403 4 0.017
ubiquitin dependent protein catabolic process GO:0006511 3 0.017
epithelial cell morphogenesis GO:0003382 2 0.017
regulation of synapse organization GO:0050807 3 0.017
regulation of cellular ketone metabolic process GO:0010565 7 0.017
proteasomal protein catabolic process GO:0010498 2 0.017
mitochondrion organization GO:0007005 4 0.017
i kappab kinase nf kappab signaling GO:0007249 4 0.017
nucleic acid transport GO:0050657 2 0.017
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.016
ion transport GO:0006811 114 0.016
modification dependent macromolecule catabolic process GO:0043632 3 0.016
cellular response to biotic stimulus GO:0071216 3 0.016
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.016
somatic muscle development GO:0007525 4 0.016
positive regulation of muscle cell differentiation GO:0051149 1 0.016
positive regulation of cellular amine metabolic process GO:0033240 0 0.016
ribonucleoside monophosphate catabolic process GO:0009158 4 0.016
cell projection organization GO:0030030 284 0.016
gastrulation GO:0007369 208 0.016
macromolecular complex disassembly GO:0032984 1 0.016
guanosine containing compound catabolic process GO:1901069 2 0.016
digestive tract morphogenesis GO:0048546 231 0.016
response to nutrient GO:0007584 3 0.016
regulation of cell activation GO:0050865 1 0.016
extrinsic apoptotic signaling pathway GO:0097191 3 0.016
morphogenesis of an epithelium GO:0002009 333 0.016
carbohydrate biosynthetic process GO:0016051 1 0.016
protein import into nucleus GO:0006606 3 0.016
regulation of reproductive process GO:2000241 4 0.016
regulation of establishment of protein localization GO:0070201 4 0.016
alternative mrna splicing via spliceosome GO:0000380 1 0.016
nuclear import GO:0051170 3 0.016
cellular nitrogen compound biosynthetic process GO:0044271 218 0.015
cellular response to nutrient levels GO:0031669 2 0.015
cell substrate adhesion GO:0031589 4 0.015
regulation of gene expression GO:0010468 265 0.015
nucleocytoplasmic transport GO:0006913 4 0.015
protein import GO:0017038 3 0.015
protein targeting to nucleus GO:0044744 3 0.015
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.015
immune system development GO:0002520 191 0.015
multi organism process GO:0051704 134 0.015
regulation of rna metabolic process GO:0051252 224 0.015
regulation of cellular biosynthetic process GO:0031326 245 0.015
phosphate containing compound metabolic process GO:0006796 108 0.015
regulation of synapse assembly GO:0051963 3 0.015
nucleobase containing compound biosynthetic process GO:0034654 205 0.015
generation of neurons GO:0048699 385 0.015
cell cycle arrest GO:0007050 1 0.015
cellular component assembly GO:0022607 170 0.015
regulation of multicellular organismal development GO:2000026 223 0.015
response to amino acid GO:0043200 2 0.015
cellular component morphogenesis GO:0032989 336 0.015
regulation of cell development GO:0060284 100 0.015
dna templated transcription elongation GO:0006354 3 0.015
regulation of protein transport GO:0051223 3 0.015
response to organic substance GO:0010033 153 0.015
protein dephosphorylation GO:0006470 3 0.015
regulation of binding GO:0051098 3 0.015
negative regulation of sequestering of calcium ion GO:0051283 4 0.015
rna biosynthetic process GO:0032774 181 0.015
cell substrate junction assembly GO:0007044 2 0.015
blood vessel morphogenesis GO:0048514 216 0.015
gtp metabolic process GO:0046039 4 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.014
negative regulation of protein phosphorylation GO:0001933 4 0.014
stem cell maintenance GO:0019827 4 0.014
regulation of carbohydrate metabolic process GO:0006109 4 0.014
dicarboxylic acid transport GO:0006835 1 0.014
regulation of nitrogen compound metabolic process GO:0051171 251 0.014
developmental growth GO:0048589 166 0.014
muscle cell differentiation GO:0042692 139 0.014
negative regulation of neural precursor cell proliferation GO:2000178 1 0.014
positive regulation of cytoskeleton organization GO:0051495 3 0.014
aromatic compound biosynthetic process GO:0019438 217 0.014
cellular response to starvation GO:0009267 1 0.014
cellular response to oxygen levels GO:0071453 1 0.014
internal protein amino acid acetylation GO:0006475 2 0.014
protein homooligomerization GO:0051260 3 0.014
regulation of macromolecule biosynthetic process GO:0010556 225 0.014
release of sequestered calcium ion into cytosol GO:0051209 3 0.014
positive regulation of cellular process GO:0048522 201 0.014
lymphocyte proliferation GO:0046651 1 0.013
mitochondrial transport GO:0006839 2 0.013
autophagy GO:0006914 4 0.013
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.013
regulation of cell differentiation GO:0045595 142 0.013
neuron neuron synaptic transmission GO:0007270 1 0.013
regulation of meiotic cell cycle GO:0051445 1 0.013
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.013
response to vitamin GO:0033273 3 0.013
circulatory system process GO:0003013 87 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.013
atp catabolic process GO:0006200 4 0.013
meiotic cell cycle process GO:1903046 3 0.013
cytokinesis GO:0000910 3 0.013
cellular response to organic substance GO:0071310 105 0.013
negative regulation of cellular process GO:0048523 283 0.013
positive regulation of cell activation GO:0050867 1 0.013
regulation of stem cell differentiation GO:2000736 4 0.013
positive regulation of blood circulation GO:1903524 2 0.013
protein acetylation GO:0006473 2 0.013
regulation of blood pressure GO:0008217 1 0.013
nucleobase containing compound transport GO:0015931 2 0.013
sensory organ development GO:0007423 393 0.013
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.013
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.013
peptidyl serine modification GO:0018209 2 0.013
smooth muscle contraction GO:0006939 2 0.013
regulation of metal ion transport GO:0010959 4 0.013
response to wounding GO:0009611 116 0.013
regulation of protein polymerization GO:0032271 2 0.013
locomotor rhythm GO:0045475 3 0.013
muscle organ development GO:0007517 101 0.013
macromolecule biosynthetic process GO:0009059 227 0.013
alpha amino acid metabolic process GO:1901605 3 0.013
heart development GO:0007507 313 0.013
negative regulation of cytokine production GO:0001818 1 0.013
rna metabolic process GO:0016070 219 0.013
establishment of protein localization to plasma membrane GO:0090002 1 0.013
digestive tract development GO:0048565 265 0.013
cellular protein metabolic process GO:0044267 129 0.013
muscle structure development GO:0061061 196 0.012
response to abiotic stimulus GO:0009628 122 0.012
positive regulation of cell adhesion GO:0045785 1 0.012
protein secretion GO:0009306 1 0.012
mononuclear cell proliferation GO:0032943 1 0.012
negative regulation of catabolic process GO:0009895 3 0.012
cellular response to decreased oxygen levels GO:0036294 1 0.012
cell aging GO:0007569 2 0.012
response to corticosteroid GO:0031960 1 0.012
regulation of purine nucleotide catabolic process GO:0033121 2 0.012
blood vessel development GO:0001568 246 0.012
regulation of cell substrate adhesion GO:0010810 1 0.012
nucleotide biosynthetic process GO:0009165 21 0.012
intracellular signal transduction GO:0035556 85 0.012
positive regulation of translation GO:0045727 1 0.012
regulation of gtpase activity GO:0043087 2 0.012
cilium morphogenesis GO:0060271 85 0.012
embryo development ending in birth or egg hatching GO:0009792 271 0.012
ion transmembrane transport GO:0034220 91 0.012
embryonic organ morphogenesis GO:0048562 274 0.012
internal peptidyl lysine acetylation GO:0018393 2 0.012
convergent extension GO:0060026 118 0.012
regulation of nucleotide catabolic process GO:0030811 2 0.012
dorsal ventral pattern formation GO:0009953 125 0.012
protein localization to nucleus GO:0034504 3 0.012
angiogenesis GO:0001525 158 0.012
tissue regeneration GO:0042246 74 0.012
negative regulation of mapk cascade GO:0043409 4 0.012
circadian sleep wake cycle sleep GO:0050802 1 0.012
protein localization to plasma membrane GO:0072659 1 0.012
rna transport GO:0050658 2 0.012
small molecule catabolic process GO:0044282 3 0.012
transmembrane transport GO:0055085 120 0.012
actin mediated cell contraction GO:0070252 1 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
regulation of striated muscle contraction GO:0006942 2 0.012
peptidyl lysine acetylation GO:0018394 2 0.012
convergent extension involved in gastrulation GO:0060027 71 0.011
somite development GO:0061053 96 0.011
regulation of circadian rhythm GO:0042752 4 0.011
actin filament based movement GO:0030048 1 0.011
programmed cell death GO:0012501 119 0.011
regulation of protein complex assembly GO:0043254 3 0.011
determination of bilateral symmetry GO:0009855 204 0.011
actin filament polymerization GO:0030041 2 0.011
cell motility GO:0048870 244 0.011
nucleic acid templated transcription GO:0097659 181 0.011
peptide transport GO:0015833 1 0.011
er nucleus signaling pathway GO:0006984 2 0.011
positive regulation of secretion GO:0051047 1 0.011
cellular response to hypoxia GO:0071456 1 0.011
multicellular organismal metabolic process GO:0044236 2 0.011
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.011
oxidation reduction process GO:0055114 41 0.011
regulation of nucleocytoplasmic transport GO:0046822 2 0.011
cellular response to lipopolysaccharide GO:0071222 3 0.011
regulation of anatomical structure morphogenesis GO:0022603 130 0.011
chordate embryonic development GO:0043009 271 0.011
organelle organization GO:0006996 227 0.011
regulation of protein catabolic process GO:0042176 1 0.011
regeneration GO:0031099 91 0.011
regulation of rho protein signal transduction GO:0035023 2 0.011
axonogenesis GO:0007409 152 0.011
behavior GO:0007610 74 0.011
protein acylation GO:0043543 3 0.011
specification of symmetry GO:0009799 204 0.011
regulation of epithelial cell proliferation GO:0050678 3 0.011
regulation of dendrite development GO:0050773 3 0.011
female meiotic division GO:0007143 2 0.011
homeostatic process GO:0042592 142 0.011
multicellular organismal macromolecule metabolic process GO:0044259 2 0.011
negative regulation of biological process GO:0048519 304 0.011
secondary metabolic process GO:0019748 3 0.011
regulation of gtp catabolic process GO:0033124 2 0.011
cellular protein modification process GO:0006464 100 0.011
positive regulation of secretion by cell GO:1903532 1 0.011
b cell activation GO:0042113 2 0.011
protein polymerization GO:0051258 4 0.011
regulation of protein depolymerization GO:1901879 1 0.011
regulation of myotube differentiation GO:0010830 2 0.011
lipid catabolic process GO:0016042 4 0.011
cytoskeleton organization GO:0007010 96 0.011
regulation of cell projection assembly GO:0060491 4 0.011
negative regulation of epithelial cell proliferation GO:0050680 1 0.011
regulation of calcium ion transport GO:0051924 2 0.011
respiratory electron transport chain GO:0022904 2 0.011
regulation of protein complex disassembly GO:0043244 1 0.011
lipid homeostasis GO:0055088 3 0.011
axon development GO:0061564 166 0.011
regulation of protein binding GO:0043393 3 0.011
cellular macromolecule biosynthetic process GO:0034645 224 0.011
wound healing GO:0042060 90 0.010
glial cell migration GO:0008347 3 0.010
positive regulation of dna metabolic process GO:0051054 1 0.010
notochord development GO:0030903 54 0.010
calcium mediated signaling GO:0019722 2 0.010
cellular component assembly involved in morphogenesis GO:0010927 107 0.010
negative regulation of signaling GO:0023057 96 0.010
germ line stem cell maintenance GO:0030718 2 0.010
regulation of transcription dna templated GO:0006355 213 0.010
cell projection morphogenesis GO:0048858 244 0.010
response to uv GO:0009411 3 0.010
negative regulation of translation GO:0017148 1 0.010
positive regulation of map kinase activity GO:0043406 3 0.010
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.010
negative regulation of cell communication GO:0010648 96 0.010
neuron development GO:0048666 262 0.010
myofibril assembly GO:0030239 48 0.010
regulation of jak stat cascade GO:0046425 3 0.010
regulation of cellular component organization GO:0051128 86 0.010
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.010
enzyme linked receptor protein signaling pathway GO:0007167 106 0.010
positive regulation of striated muscle tissue development GO:0045844 1 0.010
cation transport GO:0006812 81 0.010
response to alkaloid GO:0043279 2 0.010
ion homeostasis GO:0050801 41 0.010
histone h3 k4 methylation GO:0051568 2 0.010

lrrc39 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.060
nervous system disease DOID:863 0 0.021
musculoskeletal system disease DOID:17 0 0.020
muscular disease DOID:0080000 0 0.016
disease of metabolism DOID:0014667 0 0.016
myopathy DOID:423 0 0.014
muscle tissue disease DOID:66 0 0.014
sensory system disease DOID:0050155 0 0.010