Danio rerio

38 known processes

prp

persistent plexus

prp biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cellular aromatic compound metabolic process GO:0006725 295 0.089
cellular protein catabolic process GO:0044257 4 0.087
cellular nitrogen compound metabolic process GO:0034641 290 0.082
immune system development GO:0002520 191 0.075
rna biosynthetic process GO:0032774 181 0.068
regulation of rna biosynthetic process GO:2001141 213 0.066
central nervous system development GO:0007417 387 0.055
heart process GO:0003015 71 0.055
system process GO:0003008 185 0.054
single organism localization GO:1902578 225 0.053
inorganic ion transmembrane transport GO:0098660 57 0.052
signal transduction GO:0007165 455 0.049
cellular macromolecule metabolic process GO:0044260 391 0.048
small molecule metabolic process GO:0044281 77 0.048
organic cyclic compound biosynthetic process GO:1901362 223 0.048
metal ion transport GO:0030001 58 0.047
response to stress GO:0006950 263 0.046
neuron development GO:0048666 262 0.046
establishment of protein localization to organelle GO:0072594 4 0.045
regulation of gene expression GO:0010468 265 0.045
transcription from rna polymerase ii promoter GO:0006366 80 0.043
protein localization to nucleus GO:0034504 3 0.043
aging GO:0007568 2 0.042
heterocycle metabolic process GO:0046483 290 0.041
larval development GO:0002164 2 0.041
modification dependent macromolecule catabolic process GO:0043632 3 0.041
digestive system development GO:0055123 289 0.041
organic cyclic compound metabolic process GO:1901360 301 0.039
appendage development GO:0048736 80 0.039
transport GO:0006810 220 0.039
cellular macromolecule biosynthetic process GO:0034645 224 0.038
single organism metabolic process GO:0044710 217 0.035
neuronal action potential GO:0019228 18 0.035
cellular biosynthetic process GO:0044249 286 0.035
transmission of nerve impulse GO:0019226 19 0.034
fin development GO:0033333 77 0.033
nitrogen compound metabolic process GO:0006807 319 0.033
erk1 and erk2 cascade GO:0070371 4 0.032
regulation of protein transport GO:0051223 3 0.032
nucleobase containing compound metabolic process GO:0006139 274 0.031
immune system process GO:0002376 241 0.031
regulation of erk1 and erk2 cascade GO:0070372 4 0.031
heterocycle biosynthetic process GO:0018130 215 0.030
cellular amino acid metabolic process GO:0006520 7 0.029
regulation of nucleocytoplasmic transport GO:0046822 2 0.028
regulation of rna metabolic process GO:0051252 224 0.028
aromatic compound biosynthetic process GO:0019438 217 0.028
nuclear import GO:0051170 3 0.028
hematopoietic or lymphoid organ development GO:0048534 191 0.028
embryo development ending in birth or egg hatching GO:0009792 271 0.027
regulation of transcription dna templated GO:0006355 213 0.027
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.026
regulation of cellular amino acid metabolic process GO:0006521 0 0.026
modification dependent protein catabolic process GO:0019941 3 0.026
cognition GO:0050890 1 0.026
transcription dna templated GO:0006351 181 0.026
neuron projection morphogenesis GO:0048812 161 0.026
nuclear transport GO:0051169 4 0.025
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.025
transmembrane transport GO:0055085 120 0.025
single organism transport GO:0044765 206 0.025
cellular nitrogen compound biosynthetic process GO:0044271 218 0.025
g1 s transition of mitotic cell cycle GO:0000082 1 0.025
establishment of localization GO:0051234 244 0.025
nucleocytoplasmic transport GO:0006913 4 0.025
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.024
cellular component morphogenesis GO:0032989 336 0.024
mononuclear cell proliferation GO:0032943 1 0.023
regulation of macromolecule metabolic process GO:0060255 317 0.023
negative regulation of signaling GO:0023057 96 0.023
skeletal system development GO:0001501 181 0.023
leukocyte proliferation GO:0070661 1 0.023
regulation of cellular amine metabolic process GO:0033238 0 0.023
regulation of protein ubiquitination GO:0031396 3 0.023
sensory organ development GO:0007423 393 0.022
regulation of establishment of protein localization GO:0070201 4 0.022
heart contraction GO:0060047 71 0.022
multicellular organism growth GO:0035264 4 0.022
negative regulation of biological process GO:0048519 304 0.022
response to drug GO:0042493 3 0.021
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.021
macromolecule biosynthetic process GO:0009059 227 0.021
cell morphogenesis GO:0000902 289 0.021
rna metabolic process GO:0016070 219 0.021
nucleic acid metabolic process GO:0090304 244 0.021
blood vessel development GO:0001568 246 0.021
organic substance biosynthetic process GO:1901576 289 0.021
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.020
negative regulation of protein transport GO:0051224 3 0.020
amine metabolic process GO:0009308 2 0.020
regulation of cytoplasmic transport GO:1903649 4 0.020
nucleobase containing compound biosynthetic process GO:0034654 205 0.020
cellular amine metabolic process GO:0044106 2 0.020
positive regulation of map kinase activity GO:0043406 3 0.020
neuron differentiation GO:0030182 353 0.020
regulation of nucleoside metabolic process GO:0009118 2 0.020
regulation of biosynthetic process GO:0009889 250 0.020
determination of heart left right asymmetry GO:0061371 117 0.020
hemopoiesis GO:0030097 183 0.020
growth GO:0040007 174 0.019
regulation of biological quality GO:0065008 263 0.019
single organism nuclear import GO:1902593 3 0.019
wound healing GO:0042060 90 0.019
protein import GO:0017038 3 0.019
regulation of macromolecule biosynthetic process GO:0010556 225 0.019
lymphocyte proliferation GO:0046651 1 0.019
regulation of intracellular protein transport GO:0033157 3 0.019
positive regulation of secretion GO:0051047 1 0.019
cell projection organization GO:0030030 284 0.019
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.019
oxoacid metabolic process GO:0043436 31 0.018
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.018
negative regulation of response to stimulus GO:0048585 104 0.018
regulation of signaling GO:0023051 235 0.018
nucleic acid templated transcription GO:0097659 181 0.018
blood circulation GO:0008015 87 0.018
regulation of multicellular organism growth GO:0040014 4 0.017
gene expression GO:0010467 252 0.017
cellular ketone metabolic process GO:0042180 11 0.017
negative regulation of developmental process GO:0051093 65 0.017
negative regulation of cellular catabolic process GO:0031330 3 0.017
regulation of protein catabolic process GO:0042176 1 0.017
generation of neurons GO:0048699 385 0.017
ras protein signal transduction GO:0007265 7 0.016
specification of symmetry GO:0009799 204 0.016
carboxylic acid metabolic process GO:0019752 22 0.016
ubiquitin dependent protein catabolic process GO:0006511 3 0.016
regeneration GO:0031099 91 0.016
homeostatic process GO:0042592 142 0.016
multicellular organismal signaling GO:0035637 22 0.016
behavior GO:0007610 74 0.016
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.016
regulation of cellular ketone metabolic process GO:0010565 7 0.016
regulation of cell activation GO:0050865 1 0.016
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.016
phosphatidylinositol mediated signaling GO:0048015 2 0.016
tube morphogenesis GO:0035239 349 0.016
sensory system development GO:0048880 76 0.015
maintenance of location GO:0051235 4 0.015
negative regulation of catabolic process GO:0009895 3 0.015
angiogenesis GO:0001525 158 0.015
positive regulation of biological process GO:0048518 253 0.015
regulation of nucleic acid templated transcription GO:1903506 213 0.014
organonitrogen compound metabolic process GO:1901564 74 0.014
lateral line system development GO:0048925 76 0.014
negative regulation of cell communication GO:0010648 96 0.014
regulation of cellular metabolic process GO:0031323 320 0.014
germ line stem cell maintenance GO:0030718 2 0.014
regulation of ion transmembrane transport GO:0034765 18 0.014
cellular component disassembly GO:0022411 1 0.014
positive regulation of catabolic process GO:0009896 4 0.014
regulation of epithelial cell proliferation GO:0050678 3 0.014
organelle organization GO:0006996 227 0.014
anterior posterior pattern specification GO:0009952 152 0.014
cell projection morphogenesis GO:0048858 244 0.014
positive regulation of transport GO:0051050 2 0.014
heart development GO:0007507 313 0.013
cell cycle g1 s phase transition GO:0044843 1 0.013
regulation of calcium ion transport GO:0051924 2 0.013
positive regulation of cellular process GO:0048522 201 0.013
protein import into nucleus GO:0006606 3 0.013
negative regulation of cytoplasmic transport GO:1903650 2 0.013
trabecula formation GO:0060343 2 0.013
digestive tract development GO:0048565 265 0.013
protein metabolic process GO:0019538 183 0.013
biosynthetic process GO:0009058 294 0.013
cation transmembrane transport GO:0098655 65 0.013
cell proliferation GO:0008283 80 0.013
axonogenesis GO:0007409 152 0.013
posterior lateral line system development GO:0048915 46 0.013
brain development GO:0007420 293 0.013
positive regulation of cellular catabolic process GO:0031331 3 0.013
guanosine containing compound metabolic process GO:1901068 4 0.013
proteasomal protein catabolic process GO:0010498 2 0.013
regulation of binding GO:0051098 3 0.012
negative regulation of macromolecule metabolic process GO:0010605 76 0.012
positive regulation of cellular amine metabolic process GO:0033240 0 0.012
trabecula morphogenesis GO:0061383 2 0.012
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.012
ion transmembrane transport GO:0034220 91 0.012
regulation of cellular biosynthetic process GO:0031326 245 0.012
negative regulation of cellular process GO:0048523 283 0.012
negative regulation of intracellular transport GO:0032387 3 0.012
axis specification GO:0009798 43 0.012
regulation of membrane potential GO:0042391 23 0.012
gtp metabolic process GO:0046039 4 0.012
positive regulation of epithelial cell proliferation GO:0050679 1 0.012
response to chemical GO:0042221 320 0.011
melanin metabolic process GO:0006582 2 0.011
appendage morphogenesis GO:0035107 56 0.011
regulation of cellular protein catabolic process GO:1903362 1 0.011
heart morphogenesis GO:0003007 156 0.011
ion transport GO:0006811 114 0.011
positive regulation of secretion by cell GO:1903532 1 0.011
chemosensory behavior GO:0007635 1 0.011
regulation of protein binding GO:0043393 3 0.011
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.011
exocytosis GO:0006887 1 0.011
negative regulation of intracellular protein transport GO:0090317 3 0.011
cell morphogenesis involved in differentiation GO:0000904 195 0.011
single organism cell adhesion GO:0098602 29 0.011
eye development GO:0001654 277 0.011
cell surface receptor signaling pathway GO:0007166 325 0.010
dorsal ventral pattern formation GO:0009953 125 0.010
axonal defasciculation GO:0007414 2 0.010
epithelial cell differentiation GO:0030855 116 0.010
programmed cell death GO:0012501 119 0.010
myelination GO:0042552 18 0.010
cellular component biogenesis GO:0044085 178 0.010
macromolecular complex disassembly GO:0032984 1 0.010
regulation of signal transduction GO:0009966 225 0.010
gland development GO:0048732 143 0.010

prp disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.031
nervous system disease DOID:863 0 0.023