Danio rerio

0 known processes

rbm4.2

RNA binding motif protein 4.2

(Aliases: MGC173903,Rbm4,wu:fc25a01,MGC77110,zgc:55830,rbm4l,MGC55830)

rbm4.2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
gene expression GO:0010467 252 0.696
Human Mouse
regulation of cellular metabolic process GO:0031323 320 0.588
Human Mouse
cellular macromolecule metabolic process GO:0044260 391 0.415
Human Mouse
regulation of mrna processing GO:0050684 3 0.401
Human
regulation of gene expression GO:0010468 265 0.387
Human Mouse
regulation of metabolic process GO:0019222 359 0.344
Human Mouse
biosynthetic process GO:0009058 294 0.330
Human Mouse
regulation of biosynthetic process GO:0009889 250 0.316
Human Mouse
positive regulation of gene expression GO:0010628 71 0.312
Mouse
organic cyclic compound metabolic process GO:1901360 301 0.310
Human
nucleic acid templated transcription GO:0097659 181 0.302
cellular macromolecule biosynthetic process GO:0034645 224 0.282
Human Mouse
rna metabolic process GO:0016070 219 0.274
Human
transcription dna templated GO:0006351 181 0.267
nitrogen compound metabolic process GO:0006807 319 0.266
Human
nucleic acid metabolic process GO:0090304 244 0.230
Human
aromatic compound biosynthetic process GO:0019438 217 0.227
regulation of macromolecule biosynthetic process GO:0010556 225 0.223
Human Mouse
heterocycle metabolic process GO:0046483 290 0.205
Human
cellular nitrogen compound metabolic process GO:0034641 290 0.197
Human
regulation of macromolecule metabolic process GO:0060255 317 0.191
Human Mouse
positive regulation of biological process GO:0048518 253 0.186
Human Mouse
regulation of primary metabolic process GO:0080090 311 0.186
Human Mouse
organic cyclic compound biosynthetic process GO:1901362 223 0.178
alternative mrna splicing via spliceosome GO:0000380 1 0.171
Human
organic substance biosynthetic process GO:1901576 289 0.168
Human Mouse
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.167
Human
signal transduction GO:0007165 455 0.167
Human
phagocytosis GO:0006909 3 0.162
cellular aromatic compound metabolic process GO:0006725 295 0.161
Human
regulation of transcription dna templated GO:0006355 213 0.159
regulation of rna metabolic process GO:0051252 224 0.143
Human
locomotor rhythm GO:0045475 3 0.141
Fly
rna localization GO:0006403 4 0.137
modification dependent macromolecule catabolic process GO:0043632 3 0.134
regulation of nucleic acid templated transcription GO:1903506 213 0.133
regulation of rna biosynthetic process GO:2001141 213 0.130
heterocycle biosynthetic process GO:0018130 215 0.129
cellular biosynthetic process GO:0044249 286 0.128
Human Mouse
cellular nitrogen compound biosynthetic process GO:0044271 218 0.126
intracellular estrogen receptor signaling pathway GO:0030520 3 0.126
regulation of cellular biosynthetic process GO:0031326 245 0.124
Human Mouse
positive regulation of rna metabolic process GO:0051254 59 0.120
cellular component assembly GO:0022607 170 0.118
nucleobase containing compound metabolic process GO:0006139 274 0.117
Human
regulation of mrna splicing via spliceosome GO:0048024 3 0.110
Human
response to external stimulus GO:0009605 264 0.109
Mouse
larval development GO:0002164 2 0.108
negative regulation of biological process GO:0048519 304 0.107
Human Fly
nucleocytoplasmic transport GO:0006913 4 0.105
Human
positive regulation of metabolic process GO:0009893 108 0.104
Mouse
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.098
Human
stem cell maintenance GO:0019827 4 0.098
regulation of cell communication GO:0010646 232 0.094
regulation of response to stimulus GO:0048583 269 0.091
aging GO:0007568 2 0.089
negative regulation of cellular process GO:0048523 283 0.089
Human
nucleobase containing compound biosynthetic process GO:0034654 205 0.088
positive regulation of cellular process GO:0048522 201 0.086
Human
regulation of signal transduction GO:0009966 225 0.084
ubiquitin dependent protein catabolic process GO:0006511 3 0.083
regulation of nitrogen compound metabolic process GO:0051171 251 0.081
Human
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.080
regulation of multicellular organismal process GO:0051239 277 0.075
Fly
cellular component biogenesis GO:0044085 178 0.070
regulation of signaling GO:0023051 235 0.069
single organism organelle organization GO:1902589 199 0.069
Fly
regulation of circadian rhythm GO:0042752 4 0.068
Mouse
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.065
Human
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.065
Fly
mrna processing GO:0006397 14 0.063
Human
regulation of cell death GO:0010941 103 0.061
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.061
maintenance of location GO:0051235 4 0.060
positive regulation of rna biosynthetic process GO:1902680 57 0.059
positive regulation of transcription dna templated GO:0045893 57 0.058
regulation of dendrite development GO:0050773 3 0.056
regulation of cell differentiation GO:0045595 142 0.053
Human
organelle assembly GO:0070925 110 0.053
transcription from rna polymerase ii promoter GO:0006366 80 0.053
positive regulation of nucleic acid templated transcription GO:1903508 57 0.053
mrna catabolic process GO:0006402 6 0.052
macromolecule biosynthetic process GO:0009059 227 0.051
Human Mouse
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.050
Human Mouse
single organism localization GO:1902578 225 0.050
Fly
organelle organization GO:0006996 227 0.050
Fly
gamete generation GO:0007276 33 0.050
Fly
catabolic process GO:0009056 32 0.048
multi organism process GO:0051704 134 0.048
Fly
response to drug GO:0042493 3 0.048
positive regulation of cellular component biogenesis GO:0044089 3 0.047
cellular protein catabolic process GO:0044257 4 0.047
transport GO:0006810 220 0.046
Human Fly
single organism nuclear import GO:1902593 3 0.046
embryo development ending in birth or egg hatching GO:0009792 271 0.045
cellular component morphogenesis GO:0032989 336 0.044
regulation of erk1 and erk2 cascade GO:0070372 4 0.044
neuron differentiation GO:0030182 353 0.044
regulation of multicellular organismal development GO:2000026 223 0.044
Fly
meiotic nuclear division GO:0007126 4 0.043
rna splicing GO:0008380 16 0.043
Human
response to external biotic stimulus GO:0043207 97 0.042
sex determination GO:0007530 1 0.042
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.041
single organism transport GO:0044765 206 0.041
Fly
protein import GO:0017038 3 0.041
regulation of developmental process GO:0050793 247 0.039
Human Fly
single organism metabolic process GO:0044710 217 0.039
Human
oocyte anterior posterior axis specification GO:0007314 4 0.039
nuclear import GO:0051170 3 0.038
rna processing GO:0006396 25 0.038
Human
cell projection morphogenesis GO:0048858 244 0.037
cell surface receptor signaling pathway GO:0007166 325 0.037
regulation of mrna metabolic process GO:1903311 6 0.036
Human
locomotion GO:0040011 313 0.036
response to other organism GO:0051707 97 0.036
chemosensory behavior GO:0007635 1 0.035
central nervous system development GO:0007417 387 0.035
regulation of stem cell differentiation GO:2000736 4 0.034
head development GO:0060322 303 0.034
positive regulation of transport GO:0051050 2 0.034
cellular macromolecule catabolic process GO:0044265 12 0.034
positive regulation of cellular catabolic process GO:0031331 3 0.034
intracellular mrna localization GO:0008298 1 0.033
positive regulation of macromolecule metabolic process GO:0010604 93 0.033
Mouse
reproduction GO:0000003 40 0.032
Worm Fly
oogenesis GO:0048477 14 0.032
Fly
rna biosynthetic process GO:0032774 181 0.032
positive regulation of response to stimulus GO:0048584 80 0.032
modification dependent protein catabolic process GO:0019941 3 0.032
multicellular organism reproduction GO:0032504 35 0.032
Fly
organic substance catabolic process GO:1901575 28 0.032
establishment of protein localization to organelle GO:0072594 4 0.031
rna catabolic process GO:0006401 7 0.031
positive regulation of catabolic process GO:0009896 4 0.031
cellular component disassembly GO:0022411 1 0.031
rna splicing via transesterification reactions GO:0000375 10 0.031
Human
mrna splicing via spliceosome GO:0000398 10 0.030
Human
erk1 and erk2 cascade GO:0070371 4 0.030
protein import into nucleus GO:0006606 3 0.030
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.030
regulation of apoptotic process GO:0042981 98 0.030
generation of neurons GO:0048699 385 0.029
immune system process GO:0002376 241 0.029
programmed cell death GO:0012501 119 0.029
positive regulation of cellular biosynthetic process GO:0031328 68 0.029
membrane invagination GO:0010324 1 0.029
nuclear transport GO:0051169 4 0.029
Human
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.029
cellular catabolic process GO:0044248 27 0.029
negative regulation of macromolecule metabolic process GO:0010605 76 0.029
Human
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.029
pole plasm assembly GO:0007315 4 0.029
female gamete generation GO:0007292 14 0.029
Fly
regulation of reproductive process GO:2000241 4 0.029
regulation of tube size GO:0035150 2 0.028
carbohydrate biosynthetic process GO:0016051 1 0.028
response to chemical GO:0042221 320 0.028
Human
dorsal ventral pattern formation GO:0009953 125 0.028
establishment of localization GO:0051234 244 0.028
Human Fly
positive regulation of signal transduction GO:0009967 56 0.027
protein metabolic process GO:0019538 183 0.027
Human Mouse
developmental maturation GO:0021700 34 0.027
negative regulation of metabolic process GO:0009892 86 0.026
Human
stem cell proliferation GO:0072089 4 0.026
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.026
system process GO:0003008 185 0.026
extrinsic apoptotic signaling pathway GO:0097191 3 0.026
cytoskeleton organization GO:0007010 96 0.026
Fly
response to stress GO:0006950 263 0.025
Human
phosphorus metabolic process GO:0006793 109 0.025
Human
microtubule based process GO:0007017 60 0.025
circadian rhythm GO:0007623 19 0.025
Mouse Fly
regulation of cytokine production GO:0001817 3 0.025
cell projection organization GO:0030030 284 0.024
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.024
regulation of multicellular organism growth GO:0040014 4 0.024
multicellular organism growth GO:0035264 4 0.024
establishment of localization in cell GO:0051649 77 0.024
Human Fly
autophagy GO:0006914 4 0.024
cell death GO:0008219 121 0.023
protein targeting to nucleus GO:0044744 3 0.023
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.023
macromolecule localization GO:0033036 54 0.023
Fly
neuron development GO:0048666 262 0.023
neuron projection development GO:0031175 180 0.023
cell morphogenesis GO:0000902 289 0.023
brain development GO:0007420 293 0.022
macromolecule catabolic process GO:0009057 15 0.022
multi organism cellular process GO:0044764 2 0.022
anterior posterior pattern specification GO:0009952 152 0.022
amine metabolic process GO:0009308 2 0.022
tissue remodeling GO:0048771 4 0.022
intracellular signal transduction GO:0035556 85 0.022
Human
maternal determination of anterior posterior axis embryo GO:0008358 4 0.022
positive regulation of transcription from rna polymerase ii promoter GO:0045944 22 0.021
stem cell differentiation GO:0048863 117 0.021
heart development GO:0007507 313 0.021
apoptotic process GO:0006915 116 0.021
transcription from rna polymerase iii promoter GO:0006383 1 0.021
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.020
regulation of cellular component organization GO:0051128 86 0.020
rhythmic process GO:0048511 21 0.020
Mouse Fly
microtubule cytoskeleton organization GO:0000226 33 0.020
cellular localization GO:0051641 97 0.020
Human Fly
cognition GO:0050890 1 0.020
positive regulation of biosynthetic process GO:0009891 68 0.020
protein localization to nucleus GO:0034504 3 0.020
positive regulation of multicellular organismal process GO:0051240 52 0.020
cellular response to extracellular stimulus GO:0031668 2 0.020
positive regulation of cell communication GO:0010647 56 0.020
negative regulation of cell communication GO:0010648 96 0.020
negative regulation of cellular metabolic process GO:0031324 77 0.020
Human
negative regulation of rna splicing GO:0033119 1 0.019
cell motility GO:0048870 244 0.019
positive regulation of mrna metabolic process GO:1903313 2 0.019
embryonic organ development GO:0048568 381 0.019
protein stabilization GO:0050821 2 0.019
negative regulation of mrna metabolic process GO:1903312 3 0.019
spermatid differentiation GO:0048515 2 0.019
cellular protein metabolic process GO:0044267 129 0.019
Human Mouse
regulation of cellular amine metabolic process GO:0033238 0 0.018
regulation of biological quality GO:0065008 263 0.018
single organism cellular localization GO:1902580 46 0.018
mrna stabilization GO:0048255 4 0.018
negative regulation of response to stimulus GO:0048585 104 0.018
embryonic hemopoiesis GO:0035162 53 0.018
phagocytosis engulfment GO:0006911 1 0.018
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.018
regulation of organelle assembly GO:1902115 4 0.017
macromolecular complex assembly GO:0065003 35 0.017
regulation of dendrite morphogenesis GO:0048814 3 0.017
positive regulation of cellular metabolic process GO:0031325 94 0.017
spliceosomal complex assembly GO:0000245 1 0.017
cellular response to external stimulus GO:0071496 2 0.017
positive regulation of signaling GO:0023056 56 0.017
regulation of synapse organization GO:0050807 3 0.017
defense response to fungus GO:0050832 2 0.017
regulation of carbohydrate metabolic process GO:0006109 4 0.017
regulation of stem cell proliferation GO:0072091 2 0.017
regulation of programmed cell death GO:0043067 101 0.017
negative regulation of rna metabolic process GO:0051253 48 0.016
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.016
regulation of cytoplasmic transport GO:1903649 4 0.016
Human
rna transport GO:0050658 2 0.016
negative regulation of cell differentiation GO:0045596 46 0.016
mrna transport GO:0051028 2 0.016
death GO:0016265 121 0.016
cellular respiration GO:0045333 3 0.016
compound eye development GO:0048749 2 0.016
negative regulation of programmed cell death GO:0043069 58 0.016
positive regulation of synapse assembly GO:0051965 1 0.016
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.016
spermatid development GO:0007286 2 0.016
hematopoietic or lymphoid organ development GO:0048534 191 0.016
intrinsic apoptotic signaling pathway by p53 class mediator GO:0072332 9 0.016
negative regulation of developmental process GO:0051093 65 0.016
Fly
response to lipid GO:0033993 60 0.016
rna export from nucleus GO:0006405 1 0.015
axis specification GO:0009798 43 0.015
organonitrogen compound metabolic process GO:1901564 74 0.015
regulation of localization GO:0032879 104 0.015
Human
regulation of protein complex assembly GO:0043254 3 0.015
viral process GO:0016032 1 0.015
multi organism reproductive process GO:0044703 36 0.015
Fly
multicellular organismal reproductive process GO:0048609 35 0.015
Fly
negative regulation of gene expression GO:0010629 65 0.015
Human
macromolecular complex disassembly GO:0032984 1 0.015
response to biotic stimulus GO:0009607 97 0.015
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.015
embryonic organ morphogenesis GO:0048562 274 0.014
positive regulation of ras protein signal transduction GO:0046579 1 0.014
mechanosensory behavior GO:0007638 2 0.014
cell migration GO:0016477 237 0.014
regulation of cell division GO:0051302 12 0.014
establishment of rna localization GO:0051236 3 0.014
vasculature development GO:0001944 278 0.014
organic acid metabolic process GO:0006082 31 0.014
muscle tissue development GO:0060537 110 0.014
cellular carbohydrate metabolic process GO:0044262 4 0.014
synaptic growth at neuromuscular junction GO:0051124 2 0.014
regulation of intracellular protein transport GO:0033157 3 0.014
carboxylic acid metabolic process GO:0019752 22 0.014
interspecies interaction between organisms GO:0044419 4 0.014
blood circulation GO:0008015 87 0.014
cell part morphogenesis GO:0032990 246 0.014
primitive hemopoiesis GO:0060215 27 0.014
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.014
regulation of cellular amino acid metabolic process GO:0006521 0 0.014
proteasomal protein catabolic process GO:0010498 2 0.014
adult behavior GO:0030534 2 0.014
negative regulation of defense response GO:0031348 2 0.014
positive regulation of epithelial cell proliferation GO:0050679 1 0.014
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.013
regulation of protein complex disassembly GO:0043244 1 0.013
regulation of synapse assembly GO:0051963 3 0.013
cellular response to nutrient levels GO:0031669 2 0.013
protein dephosphorylation GO:0006470 3 0.013
ribonucleoprotein complex biogenesis GO:0022613 13 0.013
cell substrate adhesion GO:0031589 4 0.013
behavior GO:0007610 74 0.013
Fly
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.013
locomotory behavior GO:0007626 34 0.013
Fly
negative regulation of mrna processing GO:0050686 1 0.013
regulation of nervous system development GO:0051960 90 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
mrna metabolic process GO:0016071 20 0.013
Human
sexual reproduction GO:0019953 36 0.013
Fly
muscle structure development GO:0061061 196 0.013
Human
regulation of receptor mediated endocytosis GO:0048259 4 0.013
cell maturation GO:0048469 23 0.013
synaptic vesicle transport GO:0048489 1 0.013
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
Human
cellular component movement GO:0006928 335 0.012
positive regulation of developmental process GO:0051094 50 0.012
Human
phosphate containing compound metabolic process GO:0006796 108 0.012
Human
negative regulation of mrna splicing via spliceosome GO:0048025 1 0.012
wound healing GO:0042060 90 0.012
cellular response to radiation GO:0071478 4 0.012
hemopoiesis GO:0030097 183 0.012
cellular response to starvation GO:0009267 1 0.012
mrna export from nucleus GO:0006406 1 0.012
organic cyclic compound catabolic process GO:1901361 15 0.012
golgi vesicle transport GO:0048193 3 0.012
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.012
chordate embryonic development GO:0043009 271 0.012
regulation of purine nucleotide catabolic process GO:0033121 2 0.012
mitotic dna integrity checkpoint GO:0044774 4 0.012
male meiosis GO:0007140 2 0.012
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.012
heterocycle catabolic process GO:0046700 15 0.012
positive regulation of cytokine production GO:0001819 2 0.012
regulation of protein ubiquitination GO:0031396 3 0.012
negative regulation of apoptotic process GO:0043066 55 0.011
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.011
negative regulation of signal transduction GO:0009968 94 0.011
immune system development GO:0002520 191 0.011
cell death in response to oxidative stress GO:0036473 2 0.011
axonogenesis GO:0007409 152 0.011
nuclear export GO:0051168 1 0.011
cell cycle GO:0007049 93 0.011
Fly
protein secretion GO:0009306 1 0.011
heart contraction GO:0060047 71 0.011
response to lipopolysaccharide GO:0032496 13 0.011
regionalization GO:0003002 274 0.011
heart morphogenesis GO:0003007 156 0.011
nucleic acid transport GO:0050657 2 0.011
oocyte axis specification GO:0007309 5 0.011
negative regulation of signaling GO:0023057 96 0.011
lateral inhibition GO:0046331 1 0.011
meiotic cell cycle process GO:1903046 3 0.011
blood vessel development GO:0001568 246 0.011
body morphogenesis GO:0010171 16 0.011
negative regulation of multi organism process GO:0043901 3 0.011
oocyte construction GO:0007308 5 0.011
cell matrix adhesion GO:0007160 4 0.011
stem cell development GO:0048864 82 0.011
development of primary female sexual characteristics GO:0046545 4 0.011
regulation of autophagy GO:0010506 3 0.011
segmentation GO:0035282 97 0.011
protein complex localization GO:0031503 1 0.011
positive regulation of nucleoside metabolic process GO:0045979 1 0.011
regulation of growth rate GO:0040009 1 0.011
blood vessel morphogenesis GO:0048514 216 0.011
neuron projection morphogenesis GO:0048812 161 0.011
regulation of anatomical structure morphogenesis GO:0022603 130 0.011
cellular amino acid metabolic process GO:0006520 7 0.010
regulation of epithelial cell proliferation GO:0050678 3 0.010
regulation of cell shape GO:0008360 1 0.010
regulation of epidermis development GO:0045682 2 0.010
negative regulation of protein kinase activity GO:0006469 4 0.010
negative regulation of kinase activity GO:0033673 4 0.010
eye development GO:0001654 277 0.010
protein complex disassembly GO:0043241 1 0.010
regulation of rna splicing GO:0043484 8 0.010
Human
regulation of cellular ketone metabolic process GO:0010565 7 0.010
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.010
cellular ketone metabolic process GO:0042180 11 0.010
positive regulation of embryonic development GO:0040019 3 0.010
protein polyubiquitination GO:0000209 4 0.010
cell substrate junction assembly GO:0007044 2 0.010
specification of symmetry GO:0009799 204 0.010
negative regulation of biosynthetic process GO:0009890 55 0.010
Human
mitotic g2 m transition checkpoint GO:0044818 3 0.010
regulation of neurogenesis GO:0050767 87 0.010
aromatic compound catabolic process GO:0019439 15 0.010

rbm4.2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.018
disease of cellular proliferation DOID:14566 0 0.015
cancer DOID:162 0 0.015
organ system cancer DOID:0050686 0 0.014
glucose metabolism disease DOID:4194 0 0.011
carbohydrate metabolism disease DOID:0050013 0 0.011
acquired metabolic disease DOID:0060158 0 0.011
diabetes mellitus DOID:9351 0 0.011
type 2 diabetes mellitus DOID:9352 0 0.011
disease of metabolism DOID:0014667 0 0.011