Danio rerio

0 known processes

ddx56

DEAD (Asp-Glu-Ala-Asp) box polypeptide 56

(Aliases: zgc:110078,noh61)

ddx56 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.378
guanosine containing compound metabolic process GO:1901068 4 0.189
nuclear transport GO:0051169 4 0.170
immune system process GO:0002376 241 0.158
embryo development ending in birth or egg hatching GO:0009792 271 0.152
guanosine containing compound catabolic process GO:1901069 2 0.149
nucleocytoplasmic transport GO:0006913 4 0.145
atp catabolic process GO:0006200 4 0.126
Yeast
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.114
Yeast
gtp catabolic process GO:0006184 2 0.113
purine nucleoside monophosphate catabolic process GO:0009128 4 0.095
Yeast
maturation of ssu rrna GO:0030490 1 0.095
pyrimidine containing compound metabolic process GO:0072527 3 0.094
cellular nitrogen compound metabolic process GO:0034641 290 0.093
Yeast
heterocycle metabolic process GO:0046483 290 0.092
Yeast
ribosomal small subunit biogenesis GO:0042274 2 0.092
ribonucleoside monophosphate catabolic process GO:0009158 4 0.086
Yeast
nuclear export GO:0051168 1 0.081
positive regulation of cellular component biogenesis GO:0044089 3 0.078
rna processing GO:0006396 25 0.077
Yeast
alternative mrna splicing via spliceosome GO:0000380 1 0.076
rrna processing GO:0006364 7 0.076
Yeast
purine ribonucleotide metabolic process GO:0009150 27 0.075
Yeast
nucleoside monophosphate catabolic process GO:0009125 4 0.073
Yeast
cell surface receptor signaling pathway GO:0007166 325 0.072
ribosome assembly GO:0042255 1 0.071
gene expression GO:0010467 252 0.071
Yeast
aging GO:0007568 2 0.071
nucleic acid metabolic process GO:0090304 244 0.070
Yeast
ribosome biogenesis GO:0042254 9 0.067
Yeast
cellular macromolecule metabolic process GO:0044260 391 0.066
Yeast
purine containing compound metabolic process GO:0072521 29 0.064
Yeast
phagocytosis GO:0006909 3 0.063
organonitrogen compound metabolic process GO:1901564 74 0.057
Yeast
lipid storage GO:0019915 1 0.057
ncrna metabolic process GO:0034660 12 0.056
Yeast
regulation of signaling GO:0023051 235 0.052
regulation of mrna processing GO:0050684 3 0.052
ribonucleotide metabolic process GO:0009259 27 0.051
Yeast
nitrogen compound metabolic process GO:0006807 319 0.051
Yeast
hematopoietic or lymphoid organ development GO:0048534 191 0.051
ncrna processing GO:0034470 8 0.050
Yeast
multi organism process GO:0051704 134 0.049
regulation of multicellular organism growth GO:0040014 4 0.048
ribose phosphate metabolic process GO:0019693 27 0.048
Yeast
carbohydrate derivative metabolic process GO:1901135 61 0.045
Yeast
gland development GO:0048732 143 0.045
purine nucleotide metabolic process GO:0006163 27 0.044
Yeast
signal transduction GO:0007165 455 0.044
rna metabolic process GO:0016070 219 0.042
Yeast
cellular aromatic compound metabolic process GO:0006725 295 0.041
Yeast
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.039
gtp metabolic process GO:0046039 4 0.038
response to chemical GO:0042221 320 0.037
maintenance of location GO:0051235 4 0.035
nucleobase containing compound metabolic process GO:0006139 274 0.035
Yeast
multicellular organism growth GO:0035264 4 0.034
hemopoiesis GO:0030097 183 0.034
regulation of signal transduction GO:0009966 225 0.033
biosynthetic process GO:0009058 294 0.032
sensory organ development GO:0007423 393 0.031
organic cyclic compound metabolic process GO:1901360 301 0.030
Yeast
developmental growth GO:0048589 166 0.030
establishment of organelle localization GO:0051656 45 0.030
pyrimidine nucleoside catabolic process GO:0046135 1 0.028
immune system development GO:0002520 191 0.028
phosphate containing compound metabolic process GO:0006796 108 0.027
Yeast
digestive tract development GO:0048565 265 0.027
rna splicing GO:0008380 16 0.027
camera type eye development GO:0043010 222 0.027
rna biosynthetic process GO:0032774 181 0.026
positive regulation of biological process GO:0048518 253 0.026
nucleotide metabolic process GO:0009117 28 0.025
Yeast
regulation of response to stimulus GO:0048583 269 0.025
pyrimidine nucleotide metabolic process GO:0006220 1 0.025
regulation of gene expression GO:0010468 265 0.025
macromolecule biosynthetic process GO:0009059 227 0.024
regulation of biological quality GO:0065008 263 0.024
cellular macromolecule biosynthetic process GO:0034645 224 0.023
mitotic cell cycle process GO:1903047 48 0.023
organophosphate metabolic process GO:0019637 37 0.022
Yeast
rna 3 end processing GO:0031123 2 0.022
nucleobase containing small molecule metabolic process GO:0055086 32 0.022
Yeast
positive regulation of transport GO:0051050 2 0.022
intracellular transport GO:0046907 32 0.021
generation of neurons GO:0048699 385 0.021
regulation of cell communication GO:0010646 232 0.021
synaptic growth at neuromuscular junction GO:0051124 2 0.021
spindle assembly GO:0051225 2 0.021
angiogenesis GO:0001525 158 0.020
positive regulation of translation GO:0045727 1 0.020
regulation of cellular metabolic process GO:0031323 320 0.020
regulation of intracellular protein transport GO:0033157 3 0.020
regulation of mrna splicing via spliceosome GO:0048024 3 0.019
nuclear import GO:0051170 3 0.019
reproductive process GO:0022414 40 0.019
centrosome cycle GO:0007098 1 0.019
response to endogenous stimulus GO:0009719 83 0.019
regulation of neurogenesis GO:0050767 87 0.019
neural retina development GO:0003407 49 0.019
organic substance biosynthetic process GO:1901576 289 0.018
catabolic process GO:0009056 32 0.018
Yeast
cellular component biogenesis GO:0044085 178 0.018
Yeast
small molecule metabolic process GO:0044281 77 0.018
Yeast
mrna splicing via spliceosome GO:0000398 10 0.018
developmental cell growth GO:0048588 52 0.017
eye development GO:0001654 277 0.017
regulation of nervous system development GO:0051960 90 0.017
spindle assembly involved in mitosis GO:0090307 1 0.017
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.017
blood vessel development GO:0001568 246 0.016
lymphocyte proliferation GO:0046651 1 0.016
regulation of multicellular organismal development GO:2000026 223 0.016
membrane invagination GO:0010324 1 0.016
mononuclear cell proliferation GO:0032943 1 0.015
cellular amine metabolic process GO:0044106 2 0.015
heart development GO:0007507 313 0.015
cellular biosynthetic process GO:0044249 286 0.015
regulation of macromolecule metabolic process GO:0060255 317 0.015
regulation of protein ubiquitination GO:0031396 3 0.015
b cell activation GO:0042113 2 0.015
positive regulation of cellular catabolic process GO:0031331 3 0.015
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.015
aromatic compound biosynthetic process GO:0019438 217 0.015
cell cycle g1 s phase transition GO:0044843 1 0.015
centrosome duplication GO:0051298 1 0.015
single organism metabolic process GO:0044710 217 0.015
Yeast
enzyme linked receptor protein signaling pathway GO:0007167 106 0.015
cellular localization GO:0051641 97 0.014
digestive system development GO:0055123 289 0.014
stem cell differentiation GO:0048863 117 0.014
phosphorus metabolic process GO:0006793 109 0.014
Yeast
embryonic cranial skeleton morphogenesis GO:0048701 90 0.014
mitotic cell cycle GO:0000278 64 0.014
response to organic substance GO:0010033 153 0.014
cellular response to endogenous stimulus GO:0071495 68 0.014
regulation of cysteine type endopeptidase activity GO:2000116 21 0.014
nucleoside phosphate metabolic process GO:0006753 28 0.014
Yeast
localization of cell GO:0051674 244 0.013
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.013
growth GO:0040007 174 0.013
reproduction GO:0000003 40 0.013
leukocyte proliferation GO:0070661 1 0.013
ribonucleoside triphosphate metabolic process GO:0009199 9 0.013
Yeast
regulation of establishment of protein localization GO:0070201 4 0.013
regulation of anatomical structure morphogenesis GO:0022603 130 0.013
regulation of rna metabolic process GO:0051252 224 0.013
cellular response to chemical stimulus GO:0070887 157 0.013
positive regulation of cellular process GO:0048522 201 0.013
organelle assembly GO:0070925 110 0.013
organelle localization GO:0051640 49 0.013
multicellular organismal response to stress GO:0033555 2 0.013
negative regulation of cytokine mediated signaling pathway GO:0001960 2 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.012
phagocytosis engulfment GO:0006911 1 0.012
establishment of localization GO:0051234 244 0.012
female sex differentiation GO:0046660 4 0.012
regulation of metabolic process GO:0019222 359 0.012
ras protein signal transduction GO:0007265 7 0.012
regulation of mitochondrion organization GO:0010821 1 0.012
ribonucleoprotein complex biogenesis GO:0022613 13 0.012
Yeast
regulation of neuron differentiation GO:0045664 56 0.012
glycosyl compound metabolic process GO:1901657 11 0.012
Yeast
heterocycle catabolic process GO:0046700 15 0.012
Yeast
retina development in camera type eye GO:0060041 146 0.012
positive regulation of catabolic process GO:0009896 4 0.012
regulation of cell activation GO:0050865 1 0.012
rna localization GO:0006403 4 0.012
peptidyl lysine acetylation GO:0018394 2 0.012
ameboidal type cell migration GO:0001667 143 0.012
amine metabolic process GO:0009308 2 0.011
embryonic organ development GO:0048568 381 0.011
regulation of cell differentiation GO:0045595 142 0.011
cellular amino acid metabolic process GO:0006520 7 0.011
regulation of multicellular organismal process GO:0051239 277 0.011
regulation of cytoplasmic transport GO:1903649 4 0.011
meiotic cell cycle process GO:1903046 3 0.011
pole plasm assembly GO:0007315 4 0.011
regulation of cellular amine metabolic process GO:0033238 0 0.011
skeletal system morphogenesis GO:0048705 102 0.011
regulation of tube size GO:0035150 2 0.011
regulation of cell shape GO:0008360 1 0.011
cell migration GO:0016477 237 0.011
urogenital system development GO:0001655 97 0.011
response to hormone GO:0009725 48 0.011
mesenchyme development GO:0060485 127 0.011
mesenchymal cell proliferation GO:0010463 1 0.010
oocyte anterior posterior axis specification GO:0007314 4 0.010
cell proliferation GO:0008283 80 0.010
cellular response to hormone stimulus GO:0032870 39 0.010
ribonucleoside metabolic process GO:0009119 11 0.010
Yeast
positive regulation of cell cycle GO:0045787 3 0.010
negative regulation of kinase activity GO:0033673 4 0.010
single organism localization GO:1902578 225 0.010
regulation of exit from mitosis GO:0007096 3 0.010
i kappab kinase nf kappab signaling GO:0007249 4 0.010

ddx56 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.015
disease of metabolism DOID:0014667 0 0.011