Danio rerio

0 known processes

usp16

ubiquitin specific protease 16

(Aliases: si:ch211-238e22.5,wu:fc76b08,wu:fc76b02,si:dkey-121n8.2)

usp16 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.161
aging GO:0007568 2 0.094
nitrogen compound metabolic process GO:0006807 319 0.040
cellular nitrogen compound metabolic process GO:0034641 290 0.038
multicellular organism growth GO:0035264 4 0.037
cellular macromolecule metabolic process GO:0044260 391 0.033
nucleocytoplasmic transport GO:0006913 4 0.032
regulation of multicellular organism growth GO:0040014 4 0.031
meiotic nuclear division GO:0007126 4 0.029
regulation of metabolic process GO:0019222 359 0.029
cellular component morphogenesis GO:0032989 336 0.028
negative regulation of biological process GO:0048519 304 0.028
response to drug GO:0042493 3 0.028
synaptic growth at neuromuscular junction GO:0051124 2 0.028
rna modification GO:0009451 2 0.027
phagocytosis GO:0006909 3 0.027
lipid storage GO:0019915 1 0.027
maintenance of location GO:0051235 4 0.027
gtp catabolic process GO:0006184 2 0.026
guanosine containing compound catabolic process GO:1901069 2 0.026
tube morphogenesis GO:0035239 349 0.025
nuclear import GO:0051170 3 0.025
meiotic chromosome segregation GO:0045132 3 0.024
positive regulation of cellular component biogenesis GO:0044089 3 0.024
single organism metabolic process GO:0044710 217 0.023
regulation of nitrogen compound metabolic process GO:0051171 251 0.023
signal transduction GO:0007165 455 0.021
response to monosaccharide GO:0034284 3 0.021
regulation of protein ubiquitination GO:0031396 3 0.021
heterocycle metabolic process GO:0046483 290 0.021
establishment of localization GO:0051234 244 0.021
morphogenesis of an epithelium GO:0002009 333 0.021
guanosine containing compound metabolic process GO:1901068 4 0.021
regulation of reproductive process GO:2000241 4 0.020
embryonic organ development GO:0048568 381 0.020
rna localization GO:0006403 4 0.020
localization of cell GO:0051674 244 0.020
cell projection organization GO:0030030 284 0.020
regulation of primary metabolic process GO:0080090 311 0.019
gtp metabolic process GO:0046039 4 0.019
ribonucleoside monophosphate catabolic process GO:0009158 4 0.019
cellular response to extracellular stimulus GO:0031668 2 0.019
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.018
organelle organization GO:0006996 227 0.018
adult behavior GO:0030534 2 0.018
nucleobase containing compound metabolic process GO:0006139 274 0.018
cognition GO:0050890 1 0.018
cellular amine metabolic process GO:0044106 2 0.018
amine metabolic process GO:0009308 2 0.018
cellular response to external stimulus GO:0071496 2 0.018
regulation of cellular amine metabolic process GO:0033238 0 0.018
cell surface receptor signaling pathway GO:0007166 325 0.018
neurotransmitter transport GO:0006836 2 0.017
regulation of establishment of protein localization GO:0070201 4 0.017
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.017
establishment of protein localization to organelle GO:0072594 4 0.017
digestive system development GO:0055123 289 0.017
regulation of cell communication GO:0010646 232 0.017
regulation of rna biosynthetic process GO:2001141 213 0.017
regulation of metal ion transport GO:0010959 4 0.017
regulation of protein transport GO:0051223 3 0.016
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.016
multi organism process GO:0051704 134 0.016
cellular component biogenesis GO:0044085 178 0.016
organic cyclic compound metabolic process GO:1901360 301 0.016
protein import into nucleus GO:0006606 3 0.016
cellular nitrogen compound biosynthetic process GO:0044271 218 0.016
single organism localization GO:1902578 225 0.016
cellular protein metabolic process GO:0044267 129 0.016
regulation of cell activation GO:0050865 1 0.016
specification of symmetry GO:0009799 204 0.016
regulation of intracellular protein transport GO:0033157 3 0.016
positive regulation of transport GO:0051050 2 0.016
nucleobase containing compound transport GO:0015931 2 0.016
response to carbohydrate GO:0009743 3 0.016
nuclear transport GO:0051169 4 0.016
cell morphogenesis GO:0000902 289 0.015
nucleic acid transport GO:0050657 2 0.015
cellular component movement GO:0006928 335 0.015
gene expression GO:0010467 252 0.015
positive regulation of cell cycle GO:0045787 3 0.015
embryo development ending in birth or egg hatching GO:0009792 271 0.015
regulation of protein import into nucleus GO:0042306 2 0.015
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.015
negative regulation of sequestering of calcium ion GO:0051283 4 0.015
small molecule metabolic process GO:0044281 77 0.015
positive regulation of cellular catabolic process GO:0031331 3 0.015
cell migration GO:0016477 237 0.015
cellular response to nutrient levels GO:0031669 2 0.015
positive regulation of catabolic process GO:0009896 4 0.015
cell motility GO:0048870 244 0.015
female gonad development GO:0008585 4 0.015
growth GO:0040007 174 0.015
cell part morphogenesis GO:0032990 246 0.015
cellular amino acid metabolic process GO:0006520 7 0.015
cellular response to starvation GO:0009267 1 0.014
protein targeting to nucleus GO:0044744 3 0.014
response to nutrient GO:0007584 3 0.014
extrinsic apoptotic signaling pathway GO:0097191 3 0.014
system process GO:0003008 185 0.014
regulation of protein targeting GO:1903533 2 0.014
regulation of synapse organization GO:0050807 3 0.014
regulation of cellular metabolic process GO:0031323 320 0.014
response to glucose GO:0009749 3 0.014
organonitrogen compound metabolic process GO:1901564 74 0.014
negative regulation of protein kinase activity GO:0006469 4 0.014
positive regulation of cellular amine metabolic process GO:0033240 0 0.014
determination of left right symmetry GO:0007368 179 0.014
negative regulation of protein phosphorylation GO:0001933 4 0.014
regulation of synapse assembly GO:0051963 3 0.014
mitochondrion organization GO:0007005 4 0.014
generation of neurons GO:0048699 385 0.014
organic acid metabolic process GO:0006082 31 0.014
regulation of response to extracellular stimulus GO:0032104 1 0.014
locomotion GO:0040011 313 0.013
digestive tract morphogenesis GO:0048546 231 0.013
negative regulation of kinase activity GO:0033673 4 0.013
regulation of cellular ketone metabolic process GO:0010565 7 0.013
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.013
cellular response to chemical stimulus GO:0070887 157 0.013
cellular component disassembly GO:0022411 1 0.013
nucleoside monophosphate catabolic process GO:0009125 4 0.013
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.013
protein localization to nucleus GO:0034504 3 0.013
single organism nuclear import GO:1902593 3 0.013
oxoacid metabolic process GO:0043436 31 0.013
digestive tract development GO:0048565 265 0.013
regulation of macromolecule metabolic process GO:0060255 317 0.013
transcription dna templated GO:0006351 181 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
rna transport GO:0050658 2 0.013
cellular aromatic compound metabolic process GO:0006725 295 0.013
carboxylic acid metabolic process GO:0019752 22 0.013
regulation of signaling GO:0023051 235 0.013
apoptotic process GO:0006915 116 0.013
regulation of cellular amino acid metabolic process GO:0006521 0 0.013
mesenchyme development GO:0060485 127 0.013
meiotic cell cycle process GO:1903046 3 0.012
regulation of nucleocytoplasmic transport GO:0046822 2 0.012
positive regulation of secretion GO:0051047 1 0.012
regulation of calcium ion transport GO:0051924 2 0.012
heterocycle biosynthetic process GO:0018130 215 0.012
neurotransmitter secretion GO:0007269 2 0.012
cell projection morphogenesis GO:0048858 244 0.012
gastrulation GO:0007369 208 0.012
regulation of nucleotide catabolic process GO:0030811 2 0.012
cell matrix adhesion GO:0007160 4 0.012
negative regulation of signaling GO:0023057 96 0.012
nuclear export GO:0051168 1 0.012
heart development GO:0007507 313 0.012
neuron differentiation GO:0030182 353 0.012
regulation of sequestering of calcium ion GO:0051282 4 0.012
rna export from nucleus GO:0006405 1 0.012
atp catabolic process GO:0006200 4 0.012
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.012
transport GO:0006810 220 0.012
regulation of biosynthetic process GO:0009889 250 0.012
actin polymerization or depolymerization GO:0008154 2 0.012
cellular component assembly GO:0022607 170 0.012
protein import GO:0017038 3 0.012
developmental growth GO:0048589 166 0.011
positive regulation of cytoskeleton organization GO:0051495 3 0.011
cell cycle g1 s phase transition GO:0044843 1 0.011
rna metabolic process GO:0016070 219 0.011
cellular response to oxygen levels GO:0071453 1 0.011
regulation of binding GO:0051098 3 0.011
macromolecular complex disassembly GO:0032984 1 0.011
macromolecule biosynthetic process GO:0009059 227 0.011
protein acylation GO:0043543 3 0.011
protein complex disassembly GO:0043241 1 0.011
negative regulation of metabolic process GO:0009892 86 0.011
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.011
positive regulation of biological process GO:0048518 253 0.011
sequestering of metal ion GO:0051238 3 0.011
response to corticosteroid GO:0031960 1 0.011
response to hexose GO:0009746 3 0.011
membrane invagination GO:0010324 1 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.011
regulation of nucleoside metabolic process GO:0009118 2 0.011
stem cell maintenance GO:0019827 4 0.011
cellular ketone metabolic process GO:0042180 11 0.011
cell substrate adhesion GO:0031589 4 0.011
establishment of rna localization GO:0051236 3 0.011
phagocytosis engulfment GO:0006911 1 0.011
negative regulation of cellular process GO:0048523 283 0.011
regulation of protein localization to nucleus GO:1900180 2 0.011
translational initiation GO:0006413 3 0.011
regulation of protein complex assembly GO:0043254 3 0.011
central nervous system development GO:0007417 387 0.011
regulation of translational initiation GO:0006446 1 0.011
phosphorus metabolic process GO:0006793 109 0.011
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.011
protein metabolic process GO:0019538 183 0.011
regulation of signal transduction GO:0009966 225 0.011
regulation of developmental process GO:0050793 247 0.011
spindle assembly GO:0051225 2 0.011
cilium morphogenesis GO:0060271 85 0.011
regulation of response to stimulus GO:0048583 269 0.011
regulation of purine nucleotide catabolic process GO:0033121 2 0.011
cell proliferation GO:0008283 80 0.010
negative regulation of cytoplasmic transport GO:1903650 2 0.010
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.010
cellular protein modification process GO:0006464 100 0.010
maturation of ssu rrna GO:0030490 1 0.010
regulation of rna metabolic process GO:0051252 224 0.010
development of primary female sexual characteristics GO:0046545 4 0.010
hormone secretion GO:0046879 2 0.010
hemopoiesis GO:0030097 183 0.010
determination of bilateral symmetry GO:0009855 204 0.010
neurological system process GO:0050877 62 0.010
camera type eye development GO:0043010 222 0.010
morphogenesis of an epithelial fold GO:0060571 1 0.010
primary neural tube formation GO:0014020 1 0.010
fertilization GO:0009566 3 0.010
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.010
neuron development GO:0048666 262 0.010
negative regulation of cellular catabolic process GO:0031330 3 0.010
protein secretion GO:0009306 1 0.010
mesenchymal cell differentiation GO:0048762 87 0.010

usp16 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.019
disease of metabolism DOID:0014667 0 0.018
nervous system disease DOID:863 0 0.016
inherited metabolic disorder DOID:655 0 0.012
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
organ system cancer DOID:0050686 0 0.012