Danio rerio

0 known processes

syne1a

spectrin repeat containing, nuclear envelope 1a

(Aliases: si:ch211-225l4.1,si:ch211-87a14.2,wu:fc76h10)

syne1a biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of cellular metabolic process GO:0031323 320 0.328
regulation of macromolecule biosynthetic process GO:0010556 225 0.193
fertilization GO:0009566 3 0.185
single fertilization GO:0007338 3 0.174
negative regulation of cellular process GO:0048523 283 0.172
response to glucose GO:0009749 3 0.166
single organism localization GO:1902578 225 0.148
cellular macromolecule metabolic process GO:0044260 391 0.145
single organism transport GO:0044765 206 0.129
regulation of macromolecule metabolic process GO:0060255 317 0.116
negative regulation of secretion GO:0051048 2 0.114
cellular ketone metabolic process GO:0042180 11 0.113
aging GO:0007568 2 0.110
organic cyclic compound metabolic process GO:1901360 301 0.107
regulation of biological quality GO:0065008 263 0.106
response to monosaccharide GO:0034284 3 0.104
amine metabolic process GO:0009308 2 0.102
nuclear migration GO:0007097 3 0.099
transport GO:0006810 220 0.089
phagocytosis GO:0006909 3 0.088
cell projection organization GO:0030030 284 0.083
rna biosynthetic process GO:0032774 181 0.082
signal transduction GO:0007165 455 0.082
larval development GO:0002164 2 0.082
regulation of metabolic process GO:0019222 359 0.082
central nervous system development GO:0007417 387 0.080
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.079
neuron neuron synaptic transmission GO:0007270 1 0.077
regulation of cellular ketone metabolic process GO:0010565 7 0.077
brain development GO:0007420 293 0.076
regionalization GO:0003002 274 0.075
exocytosis GO:0006887 1 0.074
cell surface receptor signaling pathway GO:0007166 325 0.073
regulation of signal transduction GO:0009966 225 0.072
response to abiotic stimulus GO:0009628 122 0.071
response to chemical GO:0042221 320 0.070
regulation of biosynthetic process GO:0009889 250 0.069
negative regulation of biological process GO:0048519 304 0.068
nucleobase containing compound biosynthetic process GO:0034654 205 0.068
eye development GO:0001654 277 0.067
response to carbohydrate GO:0009743 3 0.066
negative regulation of secretion by cell GO:1903531 2 0.065
lamellipodium organization GO:0097581 1 0.064
establishment of localization GO:0051234 244 0.063
Mouse
regulation of primary metabolic process GO:0080090 311 0.062
regulation of calcium ion dependent exocytosis GO:0017158 1 0.062
positive regulation of secretion by cell GO:1903532 1 0.061
regulation of establishment of protein localization GO:0070201 4 0.060
response to hexose GO:0009746 3 0.060
regulation of cellular amino acid metabolic process GO:0006521 0 0.057
cell morphogenesis involved in differentiation GO:0000904 195 0.057
negative regulation of cellular metabolic process GO:0031324 77 0.056
single organism organelle organization GO:1902589 199 0.056
regulation of dendrite development GO:0050773 3 0.055
apoptotic process GO:0006915 116 0.054
regulation of cell communication GO:0010646 232 0.054
regulation of response to stimulus GO:0048583 269 0.053
cellular component movement GO:0006928 335 0.052
regulation of erk1 and erk2 cascade GO:0070372 4 0.052
organic substance biosynthetic process GO:1901576 289 0.052
regulation of filopodium assembly GO:0051489 2 0.050
regulation of nucleic acid templated transcription GO:1903506 213 0.050
hatching GO:0035188 4 0.050
cellular response to chemical stimulus GO:0070887 157 0.050
cellular component morphogenesis GO:0032989 336 0.050
cellular amine metabolic process GO:0044106 2 0.049
regulation of dendrite morphogenesis GO:0048814 3 0.048
cell part morphogenesis GO:0032990 246 0.048
erythrocyte differentiation GO:0030218 54 0.047
erk1 and erk2 cascade GO:0070371 4 0.046
generation of neurons GO:0048699 385 0.046
axonogenesis GO:0007409 152 0.046
regulation of multicellular organismal development GO:2000026 223 0.046
cellular nitrogen compound biosynthetic process GO:0044271 218 0.046
regulation of cellular amine metabolic process GO:0033238 0 0.046
positive regulation of transport GO:0051050 2 0.045
cellular biosynthetic process GO:0044249 286 0.045
regulation of circadian rhythm GO:0042752 4 0.045
regulation of protein ubiquitination GO:0031396 3 0.044
regulation of cell activation GO:0050865 1 0.044
maintenance of location GO:0051235 4 0.043
organelle organization GO:0006996 227 0.043
epithelial tube morphogenesis GO:0060562 148 0.043
gene expression GO:0010467 252 0.042
endosomal transport GO:0016197 2 0.042
neuron projection morphogenesis GO:0048812 161 0.042
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.042
stem cell differentiation GO:0048863 117 0.041
retina development in camera type eye GO:0060041 146 0.041
head development GO:0060322 303 0.041
olfactory lobe development GO:0021988 4 0.041
hormone secretion GO:0046879 2 0.041
carbohydrate homeostasis GO:0033500 1 0.041
spinal cord development GO:0021510 46 0.041
microtubule based process GO:0007017 60 0.040
carboxylic acid metabolic process GO:0019752 22 0.040
peptide transport GO:0015833 1 0.040
macromolecule biosynthetic process GO:0009059 227 0.040
cellular component biogenesis GO:0044085 178 0.040
chordate embryonic development GO:0043009 271 0.039
neuron differentiation GO:0030182 353 0.039
cellular macromolecule biosynthetic process GO:0034645 224 0.039
positive regulation of cellular process GO:0048522 201 0.039
system process GO:0003008 185 0.038
protein stabilization GO:0050821 2 0.038
cognition GO:0050890 1 0.038
positive regulation of transcription dna templated GO:0045893 57 0.038
single organism metabolic process GO:0044710 217 0.037
regulation of fatty acid metabolic process GO:0019217 1 0.037
female sex differentiation GO:0046660 4 0.036
aromatic compound biosynthetic process GO:0019438 217 0.036
regulation of protein complex assembly GO:0043254 3 0.036
hormone transport GO:0009914 2 0.036
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.036
hematopoietic or lymphoid organ development GO:0048534 191 0.036
cellular protein metabolic process GO:0044267 129 0.035
biosynthetic process GO:0009058 294 0.035
positive regulation of cell cycle GO:0045787 3 0.035
response to light stimulus GO:0009416 46 0.035
regulation of signaling GO:0023051 235 0.034
taxis GO:0042330 109 0.034
organism emergence from protective structure GO:0071684 4 0.034
cellular nitrogen compound metabolic process GO:0034641 290 0.034
entrainment of circadian clock GO:0009649 2 0.034
intracellular signal transduction GO:0035556 85 0.034
regulation of hormone secretion GO:0046883 2 0.034
actin polymerization or depolymerization GO:0008154 2 0.034
smooth muscle contraction GO:0006939 2 0.034
regulation of nitrogen compound metabolic process GO:0051171 251 0.034
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.034
lamellipodium assembly GO:0030032 1 0.033
nucleic acid metabolic process GO:0090304 244 0.033
regulation of intracellular protein transport GO:0033157 3 0.033
pronuclear migration GO:0035046 1 0.033
establishment or maintenance of cell polarity GO:0007163 29 0.033
golgi vesicle transport GO:0048193 3 0.032
regulation of localization GO:0032879 104 0.032
transmission of nerve impulse GO:0019226 19 0.032
protein targeting to membrane GO:0006612 1 0.032
neurological system process GO:0050877 62 0.031
limb bud formation GO:0060174 2 0.031
cell matrix adhesion GO:0007160 4 0.031
regulation of rna metabolic process GO:0051252 224 0.031
organic acid metabolic process GO:0006082 31 0.031
peptidyl threonine phosphorylation GO:0018107 1 0.030
locomotion GO:0040011 313 0.030
cardiac cell fate commitment GO:0060911 1 0.030
organelle assembly GO:0070925 110 0.030
regulation of transcription dna templated GO:0006355 213 0.030
protein metabolic process GO:0019538 183 0.030
positive regulation of cell activation GO:0050867 1 0.029
cranial nerve development GO:0021545 42 0.029
ras protein signal transduction GO:0007265 7 0.029
nitrogen compound metabolic process GO:0006807 319 0.028
cell substrate adhesion GO:0031589 4 0.028
regulation of cellular biosynthetic process GO:0031326 245 0.028
lymphatic endothelial cell differentiation GO:0060836 1 0.028
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.028
regulation of rac protein signal transduction GO:0035020 1 0.028
peptidyl serine phosphorylation GO:0018105 1 0.028
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.027
cell fate specification GO:0001708 68 0.027
positive regulation of nervous system development GO:0051962 25 0.027
lipid storage GO:0019915 1 0.027
negative regulation of metabolic process GO:0009892 86 0.027
forebrain development GO:0030900 96 0.027
neuron projection guidance GO:0097485 86 0.027
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.027
establishment of nucleus localization GO:0040023 7 0.026
Mouse
cell projection morphogenesis GO:0048858 244 0.026
calcium ion dependent exocytosis GO:0017156 1 0.026
cellular amino acid metabolic process GO:0006520 7 0.026
regulation of cell projection assembly GO:0060491 4 0.026
oxoacid metabolic process GO:0043436 31 0.026
cell cycle g1 s phase transition GO:0044843 1 0.026
post golgi vesicle mediated transport GO:0006892 1 0.025
positive regulation of macromolecule metabolic process GO:0010604 93 0.025
cytoskeleton organization GO:0007010 96 0.025
adult behavior GO:0030534 2 0.025
skeletal system development GO:0001501 181 0.025
positive regulation of cellular component biogenesis GO:0044089 3 0.025
determination of left right symmetry GO:0007368 179 0.025
response to alkaloid GO:0043279 2 0.024
neuron development GO:0048666 262 0.024
positive regulation of rac protein signal transduction GO:0035022 1 0.024
sensory organ development GO:0007423 393 0.024
negative regulation of protein phosphorylation GO:0001933 4 0.024
nucleic acid templated transcription GO:0097659 181 0.024
neural nucleus development GO:0048857 15 0.024
vasculature development GO:0001944 278 0.024
transcription dna templated GO:0006351 181 0.023
rna metabolic process GO:0016070 219 0.023
immune system process GO:0002376 241 0.023
negative regulation of cell communication GO:0010648 96 0.023
regulation of multicellular organismal process GO:0051239 277 0.023
neural tube development GO:0021915 62 0.023
action potential GO:0001508 19 0.023
oocyte anterior posterior axis specification GO:0007314 4 0.022
specification of symmetry GO:0009799 204 0.022
embryo development ending in birth or egg hatching GO:0009792 271 0.022
positive regulation of biological process GO:0048518 253 0.022
organic substance transport GO:0071702 58 0.022
lipid catabolic process GO:0016042 4 0.022
negative regulation of macromolecule metabolic process GO:0010605 76 0.022
cellular lipid catabolic process GO:0044242 3 0.022
somatic muscle development GO:0007525 4 0.022
regulation of cytokine production GO:0001817 3 0.021
peripheral nervous system development GO:0007422 55 0.021
regulation of developmental process GO:0050793 247 0.021
multi organism process GO:0051704 134 0.021
determination of bilateral symmetry GO:0009855 204 0.021
cell cycle GO:0007049 93 0.021
hemopoiesis GO:0030097 183 0.021
g1 s transition of mitotic cell cycle GO:0000082 1 0.021
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.021
intracellular transport GO:0046907 32 0.021
multicellular organism growth GO:0035264 4 0.021
central nervous system neuron development GO:0021954 29 0.021
protein acylation GO:0043543 3 0.021
tissue remodeling GO:0048771 4 0.021
ventral spinal cord development GO:0021517 35 0.020
embryonic organ development GO:0048568 381 0.020
localization of cell GO:0051674 244 0.020
glucose homeostasis GO:0042593 1 0.020
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.020
protein localization to plasma membrane GO:0072659 1 0.020
protein polymerization GO:0051258 4 0.020
regulation of wound healing GO:0061041 2 0.020
positive regulation of cellular amine metabolic process GO:0033240 0 0.020
regulation of neuron differentiation GO:0045664 56 0.020
programmed cell death GO:0012501 119 0.020
negative regulation of intracellular protein transport GO:0090317 3 0.020
establishment of synaptic vesicle localization GO:0097480 1 0.020
meiotic nuclear division GO:0007126 4 0.020
regulation of exocytosis GO:0017157 1 0.020
phosphorylation GO:0016310 69 0.020
protein secretion GO:0009306 1 0.020
regulation of rna biosynthetic process GO:2001141 213 0.020
epithelial tube formation GO:0072175 19 0.019
homeostatic process GO:0042592 142 0.019
positive regulation of signal transduction GO:0009967 56 0.019
regulation of cell differentiation GO:0045595 142 0.019
nuclear transport GO:0051169 4 0.019
stem cell proliferation GO:0072089 4 0.019
peptidyl lysine acetylation GO:0018394 2 0.019
axon development GO:0061564 166 0.019
multicellular organismal signaling GO:0035637 22 0.019
regulation of cell matrix adhesion GO:0001952 1 0.018
positive regulation of secretion GO:0051047 1 0.018
guanosine containing compound metabolic process GO:1901068 4 0.018
digestive tract development GO:0048565 265 0.018
growth GO:0040007 174 0.018
response to stress GO:0006950 263 0.018
cellular carbohydrate metabolic process GO:0044262 4 0.018
heterocycle metabolic process GO:0046483 290 0.018
cellular localization GO:0051641 97 0.018
Mouse
embryonic skeletal system development GO:0048706 97 0.018
peptidyl threonine modification GO:0018210 1 0.018
organic cyclic compound biosynthetic process GO:1901362 223 0.018
ameboidal type cell migration GO:0001667 143 0.018
regulation of synapse organization GO:0050807 3 0.018
mononuclear cell proliferation GO:0032943 1 0.018
negative regulation of protein transport GO:0051224 3 0.018
lipid metabolic process GO:0006629 52 0.018
regulation of cytoplasmic transport GO:1903649 4 0.017
regulation of nervous system development GO:0051960 90 0.017
outflow tract morphogenesis GO:0003151 1 0.017
response to radiation GO:0009314 51 0.017
camera type eye development GO:0043010 222 0.017
cell projection assembly GO:0030031 64 0.017
blood vessel development GO:0001568 246 0.017
primary neural tube formation GO:0014020 1 0.017
response to inorganic substance GO:0010035 38 0.017
regulation of neurogenesis GO:0050767 87 0.017
energy reserve metabolic process GO:0006112 2 0.016
positive regulation of cell communication GO:0010647 56 0.016
small molecule metabolic process GO:0044281 77 0.016
protein modification process GO:0036211 100 0.016
regulation of multicellular organism growth GO:0040014 4 0.016
protein acetylation GO:0006473 2 0.016
guanosine containing compound catabolic process GO:1901069 2 0.016
hepaticobiliary system development GO:0061008 98 0.016
microtubule cytoskeleton organization GO:0000226 33 0.016
regulation of cell development GO:0060284 100 0.016
neuron projection development GO:0031175 180 0.016
nucleobase containing compound metabolic process GO:0006139 274 0.016
sympathetic nervous system development GO:0048485 3 0.016
embryonic organ morphogenesis GO:0048562 274 0.016
regulation of cell substrate adhesion GO:0010810 1 0.016
retina morphogenesis in camera type eye GO:0060042 79 0.016
cell cycle arrest GO:0007050 1 0.016
eye morphogenesis GO:0048592 144 0.016
digestive system development GO:0055123 289 0.016
macromolecule localization GO:0033036 54 0.016
single organism cellular localization GO:1902580 46 0.016
regulation of neuron projection development GO:0010975 40 0.016
membrane invagination GO:0010324 1 0.015
establishment of protein localization to plasma membrane GO:0090002 1 0.015
peptidyl serine modification GO:0018209 2 0.015
regulation of transport GO:0051049 45 0.015
response to external stimulus GO:0009605 264 0.015
neurotransmitter transport GO:0006836 2 0.015
anterior posterior pattern specification GO:0009952 152 0.015
cell morphogenesis GO:0000902 289 0.015
gtp catabolic process GO:0006184 2 0.015
cellular response to organic substance GO:0071310 105 0.015
lymphocyte proliferation GO:0046651 1 0.015
photoreceptor cell differentiation GO:0046530 55 0.015
cytoplasm organization GO:0007028 4 0.015
protein localization to nucleus GO:0034504 3 0.015
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.015
regulation of cell size GO:0008361 29 0.015
cell fate commitment GO:0045165 99 0.015
development of primary female sexual characteristics GO:0046545 4 0.015
membrane fusion GO:0061025 2 0.014
macromolecular complex assembly GO:0065003 35 0.014
protein import GO:0017038 3 0.014
regulation of sodium ion transport GO:0002028 2 0.014
chemotaxis GO:0006935 104 0.014
positive regulation of gtp catabolic process GO:0033126 1 0.014
positive regulation of neurogenesis GO:0050769 24 0.014
cell death GO:0008219 121 0.014
morphogenesis of an epithelium GO:0002009 333 0.014
regulation of protein targeting GO:1903533 2 0.014
cell proliferation GO:0008283 80 0.014
negative regulation of intracellular transport GO:0032387 3 0.014
regulation of cell shape GO:0008360 1 0.014
homeostasis of number of cells GO:0048872 62 0.014
regulation of wnt signaling pathway GO:0030111 53 0.014
sleep GO:0030431 1 0.014
negative regulation of chemotaxis GO:0050922 4 0.014
regulation of cellular component organization GO:0051128 86 0.014
hindbrain development GO:0030902 91 0.014
protein complex biogenesis GO:0070271 30 0.014
gland development GO:0048732 143 0.014
positive regulation of apoptotic signaling pathway GO:2001235 1 0.013
positive regulation of cytokine production GO:0001819 2 0.013
regulation of cell projection organization GO:0031344 44 0.013
nucleocytoplasmic transport GO:0006913 4 0.013
regulation of reproductive process GO:2000241 4 0.013
negative regulation of epithelial cell proliferation GO:0050680 1 0.013
protein localization GO:0008104 40 0.013
positive regulation of response to stimulus GO:0048584 80 0.013
positive regulation of nucleic acid templated transcription GO:1903508 57 0.013
spermatid development GO:0007286 2 0.013
autophagy GO:0006914 4 0.013
phosphate containing compound metabolic process GO:0006796 108 0.013
aorta development GO:0035904 4 0.013
positive regulation of cell substrate adhesion GO:0010811 1 0.013
urogenital system development GO:0001655 97 0.013
establishment of spindle localization GO:0051293 12 0.013
regulation of programmed cell death GO:0043067 101 0.013
heart development GO:0007507 313 0.013
melanin metabolic process GO:0006582 2 0.013
fatty acid transport GO:0015908 1 0.013
embryonic skeletal system morphogenesis GO:0048704 93 0.013
regulation of synaptic plasticity GO:0048167 1 0.013
phagocytosis engulfment GO:0006911 1 0.013
erythrocyte homeostasis GO:0034101 55 0.013
death GO:0016265 121 0.013
organelle localization GO:0051640 49 0.013
Mouse
regulation of retinoic acid biosynthetic process GO:1900052 6 0.013
organonitrogen compound metabolic process GO:1901564 74 0.012
cellular response to growth factor stimulus GO:0071363 39 0.012
zymogen activation GO:0031638 3 0.012
neural tube formation GO:0001841 16 0.012
regulation of gene expression GO:0010468 265 0.012
regulation of oligodendrocyte differentiation GO:0048713 1 0.012
tube morphogenesis GO:0035239 349 0.012
gastrulation GO:0007369 208 0.012
cell differentiation in spinal cord GO:0021515 40 0.012
regulation of protein transport GO:0051223 3 0.012
positive regulation of gene expression GO:0010628 71 0.012
skeletal system morphogenesis GO:0048705 102 0.012
aorta morphogenesis GO:0035909 3 0.012
actin filament polymerization GO:0030041 2 0.012
negative regulation of protein kinase activity GO:0006469 4 0.012
muscle structure development GO:0061061 196 0.012
actin filament based process GO:0030029 64 0.012
response to drug GO:0042493 3 0.012
establishment of protein localization to organelle GO:0072594 4 0.012
regulation of autophagy GO:0010506 3 0.012
meiotic cell cycle process GO:1903046 3 0.012
negative regulation of blood circulation GO:1903523 2 0.011
brain morphogenesis GO:0048854 18 0.011
endocrine pancreas development GO:0031018 27 0.011
positive regulation of catabolic process GO:0009896 4 0.011
regulation of transporter activity GO:0032409 2 0.011
segmentation GO:0035282 97 0.011
organophosphate metabolic process GO:0019637 37 0.011
heterocycle biosynthetic process GO:0018130 215 0.011
rna localization GO:0006403 4 0.011
medulla oblongata development GO:0021550 4 0.011
regulation of membrane potential GO:0042391 23 0.011
response to endogenous stimulus GO:0009719 83 0.011
oxidation reduction process GO:0055114 41 0.011
intracellular receptor signaling pathway GO:0030522 30 0.011
regulation of glial cell differentiation GO:0045685 4 0.011
negative regulation of signal transduction GO:0009968 94 0.011
stem cell maintenance GO:0019827 4 0.011
establishment of mitotic spindle localization GO:0040001 12 0.011
neuron remodeling GO:0016322 1 0.011
regulation of ion transmembrane transporter activity GO:0032412 2 0.011
spermatid differentiation GO:0048515 2 0.011
nuclear import GO:0051170 3 0.011
negative regulation of cytoplasmic transport GO:1903650 2 0.011
cellular response to hypoxia GO:0071456 1 0.011
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.011
photoreceptor cell fate commitment GO:0046552 1 0.011
regulation of cell motility GO:2000145 46 0.011
rna 3 end processing GO:0031123 2 0.011
cellular response to decreased oxygen levels GO:0036294 1 0.011
cell cell signaling GO:0007267 52 0.011
cellular response to external stimulus GO:0071496 2 0.011
gtp metabolic process GO:0046039 4 0.011
nucleobase containing compound transport GO:0015931 2 0.011
renal system development GO:0072001 94 0.011
neurotransmitter secretion GO:0007269 2 0.011
leukocyte proliferation GO:0070661 1 0.010
negative regulation of signaling GO:0023057 96 0.010
negative regulation of multicellular organismal process GO:0051241 69 0.010
striated muscle cell differentiation GO:0051146 129 0.010
female gonad development GO:0008585 4 0.010
transcription from rna polymerase ii promoter GO:0006366 80 0.010
skin development GO:0043588 54 0.010
lysosomal transport GO:0007041 2 0.010
response to organic substance GO:0010033 153 0.010
positive regulation of biosynthetic process GO:0009891 68 0.010
small gtpase mediated signal transduction GO:0007264 8 0.010
macromolecule modification GO:0043412 111 0.010
negative regulation of kinase activity GO:0033673 4 0.010
single organism intracellular transport GO:1902582 25 0.010
regulation of inflammatory response GO:0050727 2 0.010
single organismal cell cell adhesion GO:0016337 29 0.010
axon guidance GO:0007411 86 0.010
negative regulation of sequestering of calcium ion GO:0051283 4 0.010
regulation of transcription involved in cell fate commitment GO:0060850 1 0.010
positive regulation of cytoskeleton organization GO:0051495 3 0.010

syne1a disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.026