Danio rerio

64 known processes

srrm4

serine/arginine repetitive matrix 4

(Aliases: si:dkey-1k23.1,nSR100,im:7136231,ZnSR100)

srrm4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
signal transduction GO:0007165 455 0.134
chordate embryonic development GO:0043009 271 0.095
regulation of metal ion transport GO:0010959 4 0.088
central nervous system development GO:0007417 387 0.086
cellular macromolecule metabolic process GO:0044260 391 0.075
multicellular organism growth GO:0035264 4 0.071
guanosine containing compound catabolic process GO:1901069 2 0.069
aging GO:0007568 2 0.067
guanosine containing compound metabolic process GO:1901068 4 0.061
negative regulation of cellular process GO:0048523 283 0.060
adult behavior GO:0030534 2 0.057
transmembrane transport GO:0055085 120 0.054
neuron differentiation GO:0030182 353 0.053
regulation of multicellular organism growth GO:0040014 4 0.052
generation of neurons GO:0048699 385 0.050
regulation of circadian rhythm GO:0042752 4 0.049
cell projection organization GO:0030030 284 0.047
sensory organ development GO:0007423 393 0.047
regulation of macromolecule biosynthetic process GO:0010556 225 0.046
heterocycle metabolic process GO:0046483 290 0.043
response to abiotic stimulus GO:0009628 122 0.043
nucleobase containing compound biosynthetic process GO:0034654 205 0.042
nucleic acid metabolic process GO:0090304 244 0.042
brain development GO:0007420 293 0.041
regulation of multicellular organismal development GO:2000026 223 0.039
cellular component morphogenesis GO:0032989 336 0.039
sodium ion transport GO:0006814 24 0.039
olfactory placode development GO:0071698 12 0.039
gtp metabolic process GO:0046039 4 0.038
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.038
regulation of rna metabolic process GO:0051252 224 0.036
peptidyl serine phosphorylation GO:0018105 1 0.036
nucleocytoplasmic transport GO:0006913 4 0.036
regulation of transcription dna templated GO:0006355 213 0.036
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.036
negative regulation of biological process GO:0048519 304 0.034
regulation of ion transmembrane transporter activity GO:0032412 2 0.034
response to chemical GO:0042221 320 0.033
regulation of cytoplasmic transport GO:1903649 4 0.033
response to monosaccharide GO:0034284 3 0.033
peptidyl serine modification GO:0018209 2 0.033
regulation of dendrite development GO:0050773 3 0.033
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.033
regulation of transmembrane transporter activity GO:0022898 2 0.032
regulation of primary metabolic process GO:0080090 311 0.032
regulation of cellular biosynthetic process GO:0031326 245 0.032
regulation of calcium ion transport GO:0051924 2 0.031
larval development GO:0002164 2 0.031
regulation of developmental process GO:0050793 247 0.031
single organism transport GO:0044765 206 0.030
cell projection morphogenesis GO:0048858 244 0.030
gtp catabolic process GO:0006184 2 0.030
morphogenesis of an epithelium GO:0002009 333 0.030
response to stress GO:0006950 263 0.030
amine metabolic process GO:0009308 2 0.030
regulation of nitrogen compound metabolic process GO:0051171 251 0.029
regulation of cell differentiation GO:0045595 142 0.029
vasculature development GO:0001944 278 0.028
regulation of metabolic process GO:0019222 359 0.028
lipid storage GO:0019915 1 0.028
meiotic nuclear division GO:0007126 4 0.027
proteasomal protein catabolic process GO:0010498 2 0.027
central nervous system neuron differentiation GO:0021953 74 0.027
regulation of neurogenesis GO:0050767 87 0.027
positive regulation of cellular catabolic process GO:0031331 3 0.026
regulation of protein ubiquitination GO:0031396 3 0.026
cellular macromolecule biosynthetic process GO:0034645 224 0.026
positive regulation of nucleic acid templated transcription GO:1903508 57 0.026
epithelial tube morphogenesis GO:0060562 148 0.026
cognition GO:0050890 1 0.026
nitrogen compound metabolic process GO:0006807 319 0.025
response to endogenous stimulus GO:0009719 83 0.025
maintenance of location GO:0051235 4 0.025
regulation of cytokine production GO:0001817 3 0.025
positive regulation of catabolic process GO:0009896 4 0.025
leukocyte proliferation GO:0070661 1 0.025
transport GO:0006810 220 0.025
hematopoietic or lymphoid organ development GO:0048534 191 0.025
gene expression GO:0010467 252 0.025
aromatic compound biosynthetic process GO:0019438 217 0.024
sensory organ morphogenesis GO:0090596 200 0.024
cellular nitrogen compound biosynthetic process GO:0044271 218 0.024
nuclear import GO:0051170 3 0.024
system process GO:0003008 185 0.024
ion transport GO:0006811 114 0.024
regulation of protein transport GO:0051223 3 0.024
inorganic cation transmembrane transport GO:0098662 50 0.023
modification dependent protein catabolic process GO:0019941 3 0.023
cellular protein modification process GO:0006464 100 0.023
head development GO:0060322 303 0.022
regulation of cellular amine metabolic process GO:0033238 0 0.022
regulation of establishment of protein localization GO:0070201 4 0.022
phagocytosis GO:0006909 3 0.022
cell surface receptor signaling pathway GO:0007166 325 0.022
single organism nuclear import GO:1902593 3 0.022
embryo development ending in birth or egg hatching GO:0009792 271 0.022
nucleobase containing compound metabolic process GO:0006139 274 0.022
cellular response to decreased oxygen levels GO:0036294 1 0.022
heart development GO:0007507 313 0.022
cell motility GO:0048870 244 0.022
positive regulation of biological process GO:0048518 253 0.022
inorganic ion transmembrane transport GO:0098660 57 0.021
negative regulation of dna replication GO:0008156 2 0.021
positive regulation of transport GO:0051050 2 0.021
tube morphogenesis GO:0035239 349 0.021
regulation of multicellular organismal process GO:0051239 277 0.021
specification of symmetry GO:0009799 204 0.021
response to carbohydrate GO:0009743 3 0.021
cellular protein catabolic process GO:0044257 4 0.021
response to hexose GO:0009746 3 0.021
regulation of neural precursor cell proliferation GO:2000177 3 0.020
phosphorus metabolic process GO:0006793 109 0.020
digestive tract morphogenesis GO:0048546 231 0.020
regulation of meiotic cell cycle GO:0051445 1 0.020
rna metabolic process GO:0016070 219 0.020
positive regulation of cellular amine metabolic process GO:0033240 0 0.020
heterocycle biosynthetic process GO:0018130 215 0.020
regulation of dna replication GO:0006275 3 0.020
eye development GO:0001654 277 0.020
regulation of cell activation GO:0050865 1 0.020
regulation of cell substrate adhesion GO:0010810 1 0.020
glucose homeostasis GO:0042593 1 0.020
metal ion transport GO:0030001 58 0.020
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.020
regulation of protein catabolic process GO:0042176 1 0.019
protein modification process GO:0036211 100 0.019
single organism localization GO:1902578 225 0.019
regulation of purine nucleotide catabolic process GO:0033121 2 0.019
membrane invagination GO:0010324 1 0.019
regulation of gene expression GO:0010468 265 0.019
regulation of biological quality GO:0065008 263 0.019
response to organic substance GO:0010033 153 0.019
angiogenesis GO:0001525 158 0.019
macromolecule modification GO:0043412 111 0.019
positive regulation of gtp catabolic process GO:0033126 1 0.019
regulation of biosynthetic process GO:0009889 250 0.019
protein targeting to nucleus GO:0044744 3 0.019
negative regulation of dna metabolic process GO:0051053 4 0.019
cellular biosynthetic process GO:0044249 286 0.019
response to oxygen containing compound GO:1901700 55 0.019
organic substance biosynthetic process GO:1901576 289 0.019
mitochondrion organization GO:0007005 4 0.019
regulation of macromolecule metabolic process GO:0060255 317 0.019
transcription dna templated GO:0006351 181 0.018
regulation of ion transmembrane transport GO:0034765 18 0.018
establishment of localization GO:0051234 244 0.018
cellular carbohydrate metabolic process GO:0044262 4 0.018
regulation of gtpase activity GO:0043087 2 0.018
regulation of gtp catabolic process GO:0033124 2 0.018
organic cyclic compound metabolic process GO:1901360 301 0.018
ion transmembrane transport GO:0034220 91 0.018
cellular response to chemical stimulus GO:0070887 157 0.018
establishment of protein localization to organelle GO:0072594 4 0.018
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.018
regulation of cellular amino acid metabolic process GO:0006521 0 0.018
sodium ion transmembrane transport GO:0035725 21 0.018
regulation of nucleoside metabolic process GO:0009118 2 0.018
photoreceptor cell differentiation GO:0046530 55 0.018
ubiquitin dependent protein catabolic process GO:0006511 3 0.018
blood vessel development GO:0001568 246 0.018
regulation of cell development GO:0060284 100 0.018
regulation of cellular ketone metabolic process GO:0010565 7 0.018
embryonic skeletal joint morphogenesis GO:0060272 3 0.017
neurological system process GO:0050877 62 0.017
digestive system development GO:0055123 289 0.017
regulation of cell matrix adhesion GO:0001952 1 0.017
transcription from rna polymerase ii promoter GO:0006366 80 0.017
protein import into nucleus GO:0006606 3 0.017
regulation of nucleotide catabolic process GO:0030811 2 0.017
stem cell differentiation GO:0048863 117 0.016
organic cyclic compound biosynthetic process GO:1901362 223 0.016
positive regulation of gtpase activity GO:0043547 1 0.016
lymphocyte proliferation GO:0046651 1 0.016
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.016
regulation of rna biosynthetic process GO:2001141 213 0.016
nuclear transport GO:0051169 4 0.016
positive regulation of cell activation GO:0050867 1 0.016
retina development in camera type eye GO:0060041 146 0.016
regulation of reactive oxygen species metabolic process GO:2000377 2 0.016
eye morphogenesis GO:0048592 144 0.016
central nervous system neuron development GO:0021954 29 0.016
rna biosynthetic process GO:0032774 181 0.016
positive regulation of nucleoside metabolic process GO:0045979 1 0.016
phagocytosis engulfment GO:0006911 1 0.016
regulation of dendrite morphogenesis GO:0048814 3 0.016
regulation of cell death GO:0010941 103 0.016
regulation of rac protein signal transduction GO:0035020 1 0.016
cellular ketone metabolic process GO:0042180 11 0.016
cell substrate adhesion GO:0031589 4 0.016
response to uv GO:0009411 3 0.015
apoptotic process GO:0006915 116 0.015
nucleic acid templated transcription GO:0097659 181 0.015
regulation of synaptic plasticity GO:0048167 1 0.015
amino acid transport GO:0006865 2 0.015
positive regulation of apoptotic signaling pathway GO:2001235 1 0.015
cation transport GO:0006812 81 0.015
regulation of glial cell differentiation GO:0045685 4 0.015
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.015
synaptic growth at neuromuscular junction GO:0051124 2 0.015
regulation of nervous system development GO:0051960 90 0.015
organonitrogen compound metabolic process GO:1901564 74 0.015
photoreceptor cell development GO:0042461 40 0.015
b cell activation GO:0042113 2 0.015
regulation of cell shape GO:0008360 1 0.015
modification dependent macromolecule catabolic process GO:0043632 3 0.014
intracellular signal transduction GO:0035556 85 0.014
neuron neuron synaptic transmission GO:0007270 1 0.014
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.014
ras protein signal transduction GO:0007265 7 0.014
negative regulation of protein complex assembly GO:0031333 1 0.014
protein import GO:0017038 3 0.014
startle response GO:0001964 4 0.014
g2 m transition of mitotic cell cycle GO:0000086 4 0.014
synaptic target recognition GO:0008039 1 0.014
positive regulation of cytokine production GO:0001819 2 0.014
neuron development GO:0048666 262 0.014
response to ketone GO:1901654 1 0.014
skeletal system morphogenesis GO:0048705 102 0.014
embryonic organ morphogenesis GO:0048562 274 0.014
cellular amine metabolic process GO:0044106 2 0.014
camera type eye development GO:0043010 222 0.014
cellular aromatic compound metabolic process GO:0006725 295 0.014
meiotic cell cycle process GO:1903046 3 0.014
regulation of synapse assembly GO:0051963 3 0.014
cell migration GO:0016477 237 0.014
biosynthetic process GO:0009058 294 0.014
morphogenesis of an epithelial sheet GO:0002011 49 0.014
mononuclear cell proliferation GO:0032943 1 0.014
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.014
regulation of programmed cell death GO:0043067 101 0.014
monovalent inorganic cation transport GO:0015672 42 0.014
negative regulation of gliogenesis GO:0014014 1 0.014
mitotic dna damage checkpoint GO:0044773 4 0.014
regulation of transporter activity GO:0032409 2 0.014
protein secretion GO:0009306 1 0.014
interspecies interaction between organisms GO:0044419 4 0.014
response to alkaloid GO:0043279 2 0.014
nephron tubule morphogenesis GO:0072078 1 0.014
cell cycle g2 m phase transition GO:0044839 4 0.014
gastrulation GO:0007369 208 0.013
homeostatic process GO:0042592 142 0.013
protein metabolic process GO:0019538 183 0.013
regulation of cellular metabolic process GO:0031323 320 0.013
programmed cell death GO:0012501 119 0.013
peptide transport GO:0015833 1 0.013
negative regulation of cellular biosynthetic process GO:0031327 55 0.013
single organism organelle organization GO:1902589 199 0.013
stem cell proliferation GO:0072089 4 0.013
response to antibiotic GO:0046677 1 0.013
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.013
cellular response to organic substance GO:0071310 105 0.013
negative regulation of cellular catabolic process GO:0031330 3 0.013
regulation of autophagy GO:0010506 3 0.013
positive regulation of rna metabolic process GO:0051254 59 0.013
immune system process GO:0002376 241 0.013
regulation of sodium ion transmembrane transporter activity GO:2000649 1 0.013
post embryonic organ development GO:0048569 4 0.013
lipid homeostasis GO:0055088 3 0.013
regulation of mrna processing GO:0050684 3 0.013
embryonic heart tube morphogenesis GO:0003143 108 0.013
regulation of oligodendrocyte differentiation GO:0048713 1 0.013
positive regulation of cellular process GO:0048522 201 0.013
b cell mediated immunity GO:0019724 3 0.013
macromolecule localization GO:0033036 54 0.013
determination of bilateral symmetry GO:0009855 204 0.013
cellular response to extracellular stimulus GO:0031668 2 0.013
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.013
positive regulation of nucleotide catabolic process GO:0030813 1 0.012
stem cell maintenance GO:0019827 4 0.012
cellular component disassembly GO:0022411 1 0.012
response to glucose GO:0009749 3 0.012
carbohydrate homeostasis GO:0033500 1 0.012
blood vessel morphogenesis GO:0048514 216 0.012
macromolecule biosynthetic process GO:0009059 227 0.012
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.012
regulation of cellular protein catabolic process GO:1903362 1 0.012
heart morphogenesis GO:0003007 156 0.012
cellular response to oxygen levels GO:0071453 1 0.012
neuron projection morphogenesis GO:0048812 161 0.012
cellular nitrogen compound metabolic process GO:0034641 290 0.012
regulation of localization GO:0032879 104 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.012
regulation of sodium ion transmembrane transport GO:1902305 1 0.012
positive regulation of secretion GO:0051047 1 0.012
hormone transport GO:0009914 2 0.012
response to drug GO:0042493 3 0.012
cell morphogenesis GO:0000902 289 0.011
negative regulation of cell death GO:0060548 60 0.011
cellular response to lipopolysaccharide GO:0071222 3 0.011
endosomal transport GO:0016197 2 0.011
g1 s transition of mitotic cell cycle GO:0000082 1 0.011
nuclear export GO:0051168 1 0.011
spindle assembly GO:0051225 2 0.011
outflow tract morphogenesis GO:0003151 1 0.011
peptidyl threonine phosphorylation GO:0018107 1 0.011
regulation of nucleocytoplasmic transport GO:0046822 2 0.011
single organism metabolic process GO:0044710 217 0.011
cell aging GO:0007569 2 0.011
sensory perception of pain GO:0019233 1 0.011
regulation of intracellular protein transport GO:0033157 3 0.011
negative regulation of protein kinase activity GO:0006469 4 0.011
locomotor rhythm GO:0045475 3 0.011
regulation of cell communication GO:0010646 232 0.011
cell matrix adhesion GO:0007160 4 0.011
embryonic skeletal system morphogenesis GO:0048704 93 0.011
digestive tract development GO:0048565 265 0.011
energy reserve metabolic process GO:0006112 2 0.011
alternative mrna splicing via spliceosome GO:0000380 1 0.011
regulation of sequestering of calcium ion GO:0051282 4 0.011
neuron projection regeneration GO:0031102 16 0.011
regionalization GO:0003002 274 0.011
negative regulation of cell communication GO:0010648 96 0.011
cell cycle arrest GO:0007050 1 0.011
antimicrobial humoral response GO:0019730 2 0.011
determination of heart left right asymmetry GO:0061371 117 0.011
cellular protein metabolic process GO:0044267 129 0.011
renal system development GO:0072001 94 0.011
cellular response to radiation GO:0071478 4 0.011
cellular response to external stimulus GO:0071496 2 0.011
locomotion GO:0040011 313 0.011
cellular component movement GO:0006928 335 0.011
retina morphogenesis in camera type eye GO:0060042 79 0.010
tissue remodeling GO:0048771 4 0.010
response to wounding GO:0009611 116 0.010
negative regulation of macromolecule metabolic process GO:0010605 76 0.010
embryonic skeletal joint development GO:0072498 3 0.010
regulation of protein complex assembly GO:0043254 3 0.010
somite development GO:0061053 96 0.010
positive regulation of ras gtpase activity GO:0032320 1 0.010
negative regulation of cell differentiation GO:0045596 46 0.010
negative regulation of metabolic process GO:0009892 86 0.010
muscle hypertrophy GO:0014896 2 0.010
regulation of binding GO:0051098 3 0.010
regulation of anatomical structure morphogenesis GO:0022603 130 0.010
extrinsic apoptotic signaling pathway in absence of ligand GO:0097192 1 0.010
cell cycle g1 s phase transition GO:0044843 1 0.010
regulation of signal transduction GO:0009966 225 0.010
somatic muscle development GO:0007525 4 0.010
positive regulation of cellular metabolic process GO:0031325 94 0.010
regulation of apoptotic process GO:0042981 98 0.010
response to oxidative stress GO:0006979 11 0.010
positive regulation of cellular biosynthetic process GO:0031328 68 0.010

srrm4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.015
nervous system disease DOID:863 0 0.012
cancer DOID:162 0 0.011
disease of cellular proliferation DOID:14566 0 0.011