Danio rerio

7 known processes

utx

ubiquitously transcribed tetratricopeptide repeat, X chromosome

utx biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
sister chromatid cohesion GO:0007062 2 0.174
notochord development GO:0030903 54 0.130
head development GO:0060322 303 0.089
chordate embryonic development GO:0043009 271 0.088
embryonic organ morphogenesis GO:0048562 274 0.085
cartilage condensation GO:0001502 3 0.071
localization of cell GO:0051674 244 0.070
negative regulation of biological process GO:0048519 304 0.069
regulation of macromolecule metabolic process GO:0060255 317 0.065
embryonic organ development GO:0048568 381 0.065
cell motility GO:0048870 244 0.061
embryonic skeletal system development GO:0048706 97 0.061
biosynthetic process GO:0009058 294 0.060
larval development GO:0002164 2 0.055
embryo development ending in birth or egg hatching GO:0009792 271 0.055
embryonic cranial skeleton morphogenesis GO:0048701 90 0.050
signal transduction GO:0007165 455 0.049
stem cell maintenance GO:0019827 4 0.049
ribonucleoside monophosphate catabolic process GO:0009158 4 0.048
digestive tract morphogenesis GO:0048546 231 0.047
embryonic skeletal system morphogenesis GO:0048704 93 0.046
cellular nitrogen compound metabolic process GO:0034641 290 0.044
ear development GO:0043583 127 0.043
regulation of nitrogen compound metabolic process GO:0051171 251 0.043
regulation of primary metabolic process GO:0080090 311 0.037
regulation of response to stimulus GO:0048583 269 0.037
regulation of multicellular organism growth GO:0040014 4 0.036
positive regulation of cellular component biogenesis GO:0044089 3 0.036
central nervous system development GO:0007417 387 0.036
regulation of cellular biosynthetic process GO:0031326 245 0.035
negative regulation of cellular process GO:0048523 283 0.035
cell aggregation GO:0098743 3 0.034
meiotic nuclear division GO:0007126 4 0.034
cell surface receptor signaling pathway GO:0007166 325 0.034
digestive system development GO:0055123 289 0.033
regulation of metabolic process GO:0019222 359 0.033
single organism organelle organization GO:1902589 199 0.032
cellular response to nutrient levels GO:0031669 2 0.031
mesenchymal cell proliferation GO:0010463 1 0.031
cartilage development GO:0051216 96 0.031
gene expression GO:0010467 252 0.031
retina development in camera type eye GO:0060041 146 0.031
development of primary female sexual characteristics GO:0046545 4 0.031
skeletal system development GO:0001501 181 0.029
regulation of biosynthetic process GO:0009889 250 0.029
response to stress GO:0006950 263 0.029
negative regulation of dna metabolic process GO:0051053 4 0.028
regulation of muscle contraction GO:0006937 3 0.028
regulation of cellular metabolic process GO:0031323 320 0.028
organic substance biosynthetic process GO:1901576 289 0.027
multicellular organism growth GO:0035264 4 0.027
locomotion GO:0040011 313 0.027
organelle organization GO:0006996 227 0.027
muscle tissue development GO:0060537 110 0.027
meiotic chromosome segregation GO:0045132 3 0.026
digestive tract development GO:0048565 265 0.026
female gonad development GO:0008585 4 0.026
cellular macromolecule metabolic process GO:0044260 391 0.026
positive regulation of biological process GO:0048518 253 0.026
purine nucleoside monophosphate catabolic process GO:0009128 4 0.026
regulation of striated muscle contraction GO:0006942 2 0.025
lateral line development GO:0048882 66 0.025
chromosome organization involved in meiosis GO:0070192 1 0.025
macromolecule biosynthetic process GO:0009059 227 0.025
cellular biosynthetic process GO:0044249 286 0.025
regulation of chondrocyte differentiation GO:0032330 1 0.024
nitrogen compound metabolic process GO:0006807 319 0.024
cellular aromatic compound metabolic process GO:0006725 295 0.024
negative regulation of dna replication GO:0008156 2 0.024
sensory organ development GO:0007423 393 0.023
heterocycle metabolic process GO:0046483 290 0.023
membrane hyperpolarization GO:0060081 1 0.023
cellular response to starvation GO:0009267 1 0.023
immune system process GO:0002376 241 0.023
positive regulation of cytokine production GO:0001819 2 0.023
aging GO:0007568 2 0.022
regulation of gene expression GO:0010468 265 0.022
metal ion transport GO:0030001 58 0.022
cellular component movement GO:0006928 335 0.022
regulation of signal transduction GO:0009966 225 0.022
synaptic transmission cholinergic GO:0007271 4 0.022
regulation of protein catabolic process GO:0042176 1 0.022
immune system development GO:0002520 191 0.022
organic cyclic compound metabolic process GO:1901360 301 0.022
cellular response to external stimulus GO:0071496 2 0.021
connective tissue development GO:0061448 99 0.021
cation transport GO:0006812 81 0.021
meiotic cell cycle process GO:1903046 3 0.021
negative regulation of signaling GO:0023057 96 0.021
b cell activation GO:0042113 2 0.021
neuromast development GO:0048884 46 0.020
proteasomal protein catabolic process GO:0010498 2 0.020
cell migration GO:0016477 237 0.020
nucleoside monophosphate catabolic process GO:0009125 4 0.020
sensory organ morphogenesis GO:0090596 200 0.020
regulation of mrna processing GO:0050684 3 0.020
response to uv GO:0009411 3 0.020
rna metabolic process GO:0016070 219 0.020
angiogenesis GO:0001525 158 0.019
regulation of rna metabolic process GO:0051252 224 0.019
cytosolic calcium ion transport GO:0060401 3 0.019
regionalization GO:0003002 274 0.019
cellular macromolecule biosynthetic process GO:0034645 224 0.019
regulation of production of molecular mediator of immune response GO:0002700 1 0.019
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.019
anterior posterior pattern specification GO:0009952 152 0.019
lipid catabolic process GO:0016042 4 0.019
mitotic sister chromatid cohesion GO:0007064 2 0.019
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.019
aromatic compound biosynthetic process GO:0019438 217 0.019
morphogenesis of an epithelium GO:0002009 333 0.019
cellular response to extracellular stimulus GO:0031668 2 0.018
maintenance of location GO:0051235 4 0.018
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.018
regulation of reproductive process GO:2000241 4 0.018
establishment of localization GO:0051234 244 0.018
organic cyclic compound biosynthetic process GO:1901362 223 0.018
segmentation GO:0035282 97 0.018
adult behavior GO:0030534 2 0.018
synaptic target recognition GO:0008039 1 0.017
negative regulation of cell communication GO:0010648 96 0.017
nucleic acid metabolic process GO:0090304 244 0.017
somitogenesis GO:0001756 87 0.017
negative regulation of protein phosphorylation GO:0001933 4 0.017
hematopoietic or lymphoid organ development GO:0048534 191 0.017
protein acetylation GO:0006473 2 0.017
transcription dna templated GO:0006351 181 0.016
programmed cell death GO:0012501 119 0.016
regeneration GO:0031099 91 0.016
cellular nitrogen compound biosynthetic process GO:0044271 218 0.016
positive regulation of cellular catabolic process GO:0031331 3 0.016
regulation of multicellular organismal development GO:2000026 223 0.016
regulation of cytokine production GO:0001817 3 0.016
positive regulation of apoptotic signaling pathway GO:2001235 1 0.016
dorsal ventral pattern formation GO:0009953 125 0.016
pharyngeal system development GO:0060037 18 0.016
ion transport GO:0006811 114 0.016
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.016
regulation of multicellular organismal process GO:0051239 277 0.016
regulation of macromolecule biosynthetic process GO:0010556 225 0.016
epiboly GO:0090504 41 0.015
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.015
positive regulation of cytoskeleton organization GO:0051495 3 0.015
cellular component assembly involved in morphogenesis GO:0010927 107 0.015
positive regulation of transport GO:0051050 2 0.015
negative regulation of macromolecule metabolic process GO:0010605 76 0.015
regulation of apoptotic process GO:0042981 98 0.015
nucleic acid templated transcription GO:0097659 181 0.015
regulation of cell communication GO:0010646 232 0.015
negative regulation of response to stimulus GO:0048585 104 0.015
regulation of developmental process GO:0050793 247 0.015
transport GO:0006810 220 0.015
blood vessel development GO:0001568 246 0.015
regulation of transcription dna templated GO:0006355 213 0.015
inner ear morphogenesis GO:0042472 63 0.015
tube morphogenesis GO:0035239 349 0.015
negative regulation of defense response GO:0031348 2 0.015
vasculature development GO:0001944 278 0.015
antimicrobial humoral response GO:0019730 2 0.015
regulation of signaling GO:0023051 235 0.015
nucleobase containing compound biosynthetic process GO:0034654 205 0.015
protein dephosphorylation GO:0006470 3 0.015
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.015
positive regulation of blood circulation GO:1903524 2 0.015
cell projection morphogenesis GO:0048858 244 0.015
cell part morphogenesis GO:0032990 246 0.015
response to monosaccharide GO:0034284 3 0.015
rna biosynthetic process GO:0032774 181 0.014
otic vesicle development GO:0071599 42 0.014
determination of dorsal ventral asymmetry GO:0048262 34 0.014
endochondral bone growth GO:0003416 2 0.014
positive regulation of cell activation GO:0050867 1 0.014
positive regulation of dna templated transcription elongation GO:0032786 1 0.014
positive regulation of protein complex assembly GO:0031334 2 0.014
gastrulation GO:0007369 208 0.014
blood vessel morphogenesis GO:0048514 216 0.014
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.014
alcohol biosynthetic process GO:0046165 2 0.014
chondrocyte development GO:0002063 4 0.014
establishment of protein localization to organelle GO:0072594 4 0.014
cellular component morphogenesis GO:0032989 336 0.014
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.014
regulation of cell activation GO:0050865 1 0.014
protein acylation GO:0043543 3 0.013
atp catabolic process GO:0006200 4 0.013
histone h3 k4 methylation GO:0051568 2 0.013
regulation of transmembrane transporter activity GO:0022898 2 0.013
female sex differentiation GO:0046660 4 0.013
extrinsic apoptotic signaling pathway GO:0097191 3 0.013
negative regulation of signal transduction GO:0009968 94 0.013
response to carbohydrate GO:0009743 3 0.013
hemopoiesis GO:0030097 183 0.013
amide biosynthetic process GO:0043604 1 0.013
positive regulation of striated muscle cell differentiation GO:0051155 1 0.013
cell cell recognition GO:0009988 1 0.013
regulation of binding GO:0051098 3 0.013
calcium mediated signaling GO:0019722 2 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
monoamine transport GO:0015844 1 0.013
nucleobase containing compound metabolic process GO:0006139 274 0.013
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.013
response to alkaloid GO:0043279 2 0.013
regulation of protein import into nucleus GO:0042306 2 0.013
regulation of purine nucleotide catabolic process GO:0033121 2 0.013
regulation of stem cell differentiation GO:2000736 4 0.013
mononuclear cell proliferation GO:0032943 1 0.013
cell morphogenesis GO:0000902 289 0.013
leukocyte proliferation GO:0070661 1 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.012
regulation of response to biotic stimulus GO:0002831 2 0.012
positive regulation of cell cycle GO:0045787 3 0.012
positive regulation of cellular process GO:0048522 201 0.012
negative regulation of intracellular transport GO:0032387 3 0.012
nephron epithelium morphogenesis GO:0072088 1 0.012
regulation of dna replication GO:0006275 3 0.012
negative regulation of immune response GO:0050777 2 0.012
regulation of filopodium assembly GO:0051489 2 0.012
regulation of metal ion transport GO:0010959 4 0.012
specification of organ identity GO:0010092 2 0.012
regulation of rna biosynthetic process GO:2001141 213 0.012
sprouting angiogenesis GO:0002040 53 0.012
secondary metabolic process GO:0019748 3 0.012
negative regulation of secretion by cell GO:1903531 2 0.012
regulation of transporter activity GO:0032409 2 0.012
negative regulation of gene expression GO:0010629 65 0.012
renal tubule morphogenesis GO:0061333 1 0.012
protein import GO:0017038 3 0.012
skeletal system morphogenesis GO:0048705 102 0.012
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.012
regulation of axon extension GO:0030516 24 0.012
negative regulation of nuclear division GO:0051784 3 0.012
regulation of blood pressure GO:0008217 1 0.012
muscle structure development GO:0061061 196 0.012
intracellular signal transduction GO:0035556 85 0.012
mitochondrion organization GO:0007005 4 0.012
response to nicotine GO:0035094 2 0.011
cell projection organization GO:0030030 284 0.011
small molecule catabolic process GO:0044282 3 0.011
positive regulation of catabolic process GO:0009896 4 0.011
response to hexose GO:0009746 3 0.011
cell substrate adhesion GO:0031589 4 0.011
peptidyl serine modification GO:0018209 2 0.011
inner ear development GO:0048839 126 0.011
brain development GO:0007420 293 0.011
lipid homeostasis GO:0055088 3 0.011
notochord morphogenesis GO:0048570 17 0.011
modification dependent macromolecule catabolic process GO:0043632 3 0.011
chromosome organization GO:0051276 31 0.011
positive regulation of translation GO:0045727 1 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.011
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.011
regulation of intracellular protein transport GO:0033157 3 0.011
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.011
fin development GO:0033333 77 0.011
spinal cord anterior posterior patterning GO:0021512 1 0.011
negative regulation of kinase activity GO:0033673 4 0.011
regulation of programmed cell death GO:0043067 101 0.011
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.011
stem cell proliferation GO:0072089 4 0.011
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.011
cellular component biogenesis GO:0044085 178 0.011
protein localization to nucleus GO:0034504 3 0.011
developmental growth GO:0048589 166 0.011
eye morphogenesis GO:0048592 144 0.011
regulation of response to external stimulus GO:0032101 31 0.011
negative regulation of metabolic process GO:0009892 86 0.011
protein modification by small protein removal GO:0070646 1 0.011
negative regulation of multi organism process GO:0043901 3 0.011
regulation of postsynaptic membrane potential GO:0060078 1 0.011
transcription from rna polymerase ii promoter GO:0006366 80 0.011
positive regulation of nucleotide catabolic process GO:0030813 1 0.011
internal peptidyl lysine acetylation GO:0018393 2 0.011
lymphocyte proliferation GO:0046651 1 0.011
regulation of heart contraction GO:0008016 32 0.011
somatic muscle development GO:0007525 4 0.011
neural retina development GO:0003407 49 0.011
generation of neurons GO:0048699 385 0.011
exocytosis GO:0006887 1 0.011
eye development GO:0001654 277 0.011
negative regulation of cellular metabolic process GO:0031324 77 0.011
sensory system development GO:0048880 76 0.010
superoxide metabolic process GO:0006801 2 0.010
positive regulation of protein polymerization GO:0032273 2 0.010
regulation of systemic arterial blood pressure GO:0003073 1 0.010
apoptotic process involved in morphogenesis GO:0060561 2 0.010
ribosomal small subunit biogenesis GO:0042274 2 0.010
phagocytosis GO:0006909 3 0.010
epiboly involved in gastrulation with mouth forming second GO:0055113 35 0.010
post embryonic organ development GO:0048569 4 0.010
fibroblast growth factor receptor signaling pathway GO:0008543 22 0.010
regulation of tube size GO:0035150 2 0.010
peptidyl lysine acetylation GO:0018394 2 0.010
myeloid cell differentiation GO:0030099 86 0.010
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.010
regulation of skeletal muscle tissue development GO:0048641 4 0.010
cellular respiration GO:0045333 3 0.010
fat soluble vitamin metabolic process GO:0006775 4 0.010
gastrulation with mouth forming second GO:0001702 44 0.010
protein metabolic process GO:0019538 183 0.010
neuron neuron synaptic transmission GO:0007270 1 0.010
cellular carbohydrate metabolic process GO:0044262 4 0.010

utx disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.066
nervous system disease DOID:863 0 0.019
musculoskeletal system disease DOID:17 0 0.014
immune system disease DOID:2914 0 0.011
muscular disease DOID:0080000 0 0.011
muscle tissue disease DOID:66 0 0.011
central nervous system disease DOID:331 0 0.011
brain disease DOID:936 0 0.011
cardiovascular system disease DOID:1287 0 0.010