Danio rerio

0 known processes

sfrs3b

splicing factor, arginine/serine-rich 3b

(Aliases: wu:fb44e08,sfrs3,MGC63887)

sfrs3b biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of mrna splicing via spliceosome GO:0048024 3 0.771
regulation of mrna processing GO:0050684 3 0.706
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.516
regulation of metabolic process GO:0019222 359 0.369
Worm
alternative mrna splicing via spliceosome GO:0000380 1 0.357
cellular macromolecule metabolic process GO:0044260 391 0.356
Worm Fly
rna stabilization GO:0043489 4 0.342
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.259
regulation of cellular metabolic process GO:0031323 320 0.254
Worm
pole plasm assembly GO:0007315 4 0.210
rna processing GO:0006396 25 0.201
Fly
cell projection organization GO:0030030 284 0.195
aging GO:0007568 2 0.195
cellular nitrogen compound metabolic process GO:0034641 290 0.182
Worm Fly
meiotic nuclear division GO:0007126 4 0.176
rna metabolic process GO:0016070 219 0.173
Worm Fly
positive regulation of translation GO:0045727 1 0.172
oocyte anterior posterior axis specification GO:0007314 4 0.170
regulation of nitrogen compound metabolic process GO:0051171 251 0.168
Worm
nucleobase containing compound metabolic process GO:0006139 274 0.167
Worm Fly
rna splicing GO:0008380 16 0.162
Fly
cellular component biogenesis GO:0044085 178 0.156
3 utr mediated mrna stabilization GO:0070935 3 0.155
nitrogen compound metabolic process GO:0006807 319 0.152
Worm Fly
regulation of synapse assembly GO:0051963 3 0.134
mrna splicing via spliceosome GO:0000398 10 0.133
mrna stabilization GO:0048255 4 0.130
cellular aromatic compound metabolic process GO:0006725 295 0.126
Worm Fly
organic cyclic compound metabolic process GO:1901360 301 0.125
Worm Fly
larval development GO:0002164 2 0.119
Worm
neuron development GO:0048666 262 0.117
negative regulation of cellular process GO:0048523 283 0.113
negative regulation of nuclear division GO:0051784 3 0.108
nucleic acid metabolic process GO:0090304 244 0.106
Worm Fly
maternal determination of anterior posterior axis embryo GO:0008358 4 0.106
biosynthetic process GO:0009058 294 0.104
Worm
stem cell maintenance GO:0019827 4 0.104
neuron differentiation GO:0030182 353 0.103
intracellular mrna localization GO:0008298 1 0.100
cellular component morphogenesis GO:0032989 336 0.099
positive regulation of biosynthetic process GO:0009891 68 0.097
rna localization GO:0006403 4 0.097
cellular component assembly GO:0022607 170 0.097
generation of neurons GO:0048699 385 0.094
cellular biosynthetic process GO:0044249 286 0.093
Worm
regulation of meiotic cell cycle GO:0051445 1 0.091
cellular nitrogen compound biosynthetic process GO:0044271 218 0.091
Worm
regulation of gene expression GO:0010468 265 0.091
Worm
reproductive process GO:0022414 40 0.091
Worm
negative regulation of rna splicing GO:0033119 1 0.088
gene expression GO:0010467 252 0.084
Worm Fly
regulation of synapse organization GO:0050807 3 0.083
cell morphogenesis GO:0000902 289 0.083
adult behavior GO:0030534 2 0.083
organelle organization GO:0006996 227 0.083
protein metabolic process GO:0019538 183 0.081
cell substrate junction assembly GO:0007044 2 0.080
spliceosomal complex assembly GO:0000245 1 0.079
multi organism process GO:0051704 134 0.076
Worm
heterocycle metabolic process GO:0046483 290 0.073
Worm Fly
oocyte axis specification GO:0007309 5 0.071
negative regulation of biological process GO:0048519 304 0.071
Worm
organic cyclic compound biosynthetic process GO:1901362 223 0.070
Worm
regulation of primary metabolic process GO:0080090 311 0.070
Worm
transcription dna templated GO:0006351 181 0.067
Worm
regulation of transcription dna templated GO:0006355 213 0.066
Worm
axis specification GO:0009798 43 0.066
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.065
Worm
cell projection morphogenesis GO:0048858 244 0.063
macromolecule biosynthetic process GO:0009059 227 0.063
Worm
organic substance biosynthetic process GO:1901576 289 0.062
Worm
regulation of rna biosynthetic process GO:2001141 213 0.061
Worm
regulation of biosynthetic process GO:0009889 250 0.060
Worm
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.060
response to external stimulus GO:0009605 264 0.058
aromatic compound biosynthetic process GO:0019438 217 0.057
Worm
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.056
oocyte construction GO:0007308 5 0.054
negative regulation of mitosis GO:0045839 3 0.054
synaptic vesicle recycling GO:0036465 1 0.054
negative regulation of gene expression GO:0010629 65 0.054
regulation of cell communication GO:0010646 232 0.052
axon development GO:0061564 166 0.052
axonogenesis GO:0007409 152 0.051
regulation of multicellular organismal development GO:2000026 223 0.051
Worm
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.051
positive regulation of cellular process GO:0048522 201 0.050
gamete generation GO:0007276 33 0.050
Worm
positive regulation of gene expression GO:0010628 71 0.049
response to organic substance GO:0010033 153 0.048
response to chemical GO:0042221 320 0.048
immune system process GO:0002376 241 0.048
synaptic growth at neuromuscular junction GO:0051124 2 0.048
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.048
Worm
negative regulation of synapse assembly GO:0051964 2 0.047
cellular response to dsrna GO:0071359 1 0.047
cellular component movement GO:0006928 335 0.046
mrna processing GO:0006397 14 0.046
regulation of macromolecule metabolic process GO:0060255 317 0.046
Worm
eye development GO:0001654 277 0.046
cellular component disassembly GO:0022411 1 0.046
Worm
negative regulation of metabolic process GO:0009892 86 0.044
sex determination GO:0007530 1 0.044
organelle fission GO:0048285 23 0.044
multi organism cellular process GO:0044764 2 0.044
embryo development ending in birth or egg hatching GO:0009792 271 0.044
Worm
cellular macromolecule biosynthetic process GO:0034645 224 0.043
Worm
antimicrobial humoral response GO:0019730 2 0.043
modification dependent macromolecule catabolic process GO:0043632 3 0.043
regulation of rna splicing GO:0043484 8 0.042
locomotion GO:0040011 313 0.042
Worm
interspecies interaction between organisms GO:0044419 4 0.042
positive regulation of ras protein signal transduction GO:0046579 1 0.042
mrna metabolic process GO:0016071 20 0.041
rna splicing via transesterification reactions GO:0000375 10 0.041
macromolecular complex subunit organization GO:0043933 74 0.040
Worm
regionalization GO:0003002 274 0.040
hematopoietic or lymphoid organ development GO:0048534 191 0.040
maintenance of location GO:0051235 4 0.039
compound eye development GO:0048749 2 0.039
larval behavior GO:0030537 5 0.038
dorsal ventral pattern formation GO:0009953 125 0.038
regulation of developmental process GO:0050793 247 0.038
Worm
regulation of cellular component organization GO:0051128 86 0.038
Worm
regulation of macromolecule biosynthetic process GO:0010556 225 0.037
Worm
regulation of biological quality GO:0065008 263 0.037
regulation of mrna stability GO:0043488 4 0.037
developmental process involved in reproduction GO:0003006 27 0.037
Worm
hemopoiesis GO:0030097 183 0.037
regulation of rna metabolic process GO:0051252 224 0.036
Worm
axon guidance GO:0007411 86 0.036
positive regulation of biological process GO:0048518 253 0.036
Worm
cellular macromolecular complex assembly GO:0034622 24 0.035
single organism organelle organization GO:1902589 199 0.035
neuromuscular synaptic transmission GO:0007274 2 0.035
positive regulation of metabolic process GO:0009893 108 0.035
establishment or maintenance of cell polarity GO:0007163 29 0.035
histone deacetylation GO:0016575 2 0.034
growth GO:0040007 174 0.034
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.034
neuron projection development GO:0031175 180 0.034
negative regulation of macromolecule metabolic process GO:0010605 76 0.033
central nervous system development GO:0007417 387 0.033
regulation of protein complex disassembly GO:0043244 1 0.033
Worm
localization of cell GO:0051674 244 0.032
cell part morphogenesis GO:0032990 246 0.032
dna templated transcription elongation GO:0006354 3 0.032
neuron projection guidance GO:0097485 86 0.032
chemotaxis GO:0006935 104 0.030
lipid storage GO:0019915 1 0.030
locomotor rhythm GO:0045475 3 0.030
protein complex disassembly GO:0043241 1 0.030
Worm
cell surface receptor signaling pathway GO:0007166 325 0.030
regulation of cellular biosynthetic process GO:0031326 245 0.030
Worm
meiotic cell cycle process GO:1903046 3 0.029
negative regulation of rna metabolic process GO:0051253 48 0.029
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.028
immune system development GO:0002520 191 0.028
negative regulation of developmental process GO:0051093 65 0.028
Worm
single organism reproductive process GO:0044702 40 0.028
Worm
positive regulation of cellular biosynthetic process GO:0031328 68 0.027
signal transduction GO:0007165 455 0.027
germ cell development GO:0007281 22 0.027
Worm
germ line stem cell maintenance GO:0030718 2 0.027
cytoskeleton organization GO:0007010 96 0.027
viral process GO:0016032 1 0.027
ubiquitin dependent protein catabolic process GO:0006511 3 0.027
stem cell differentiation GO:0048863 117 0.026
internal protein amino acid acetylation GO:0006475 2 0.026
rna biosynthetic process GO:0032774 181 0.026
Worm
regulation of gene expression epigenetic GO:0040029 11 0.026
neuron projection morphogenesis GO:0048812 161 0.026
multicellular organismal reproductive process GO:0048609 35 0.025
Worm
cytokinesis GO:0000910 3 0.025
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.025
regulation of peptidase activity GO:0052547 23 0.025
sexual reproduction GO:0019953 36 0.025
Worm
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 0 0.024
nucleobase containing compound biosynthetic process GO:0034654 205 0.024
Worm
regulation of cell differentiation GO:0045595 142 0.024
oocyte development GO:0048599 14 0.024
establishment of localization GO:0051234 244 0.024
negative regulation of biosynthetic process GO:0009890 55 0.024
posttranscriptional regulation of gene expression GO:0010608 14 0.024
segmentation GO:0035282 97 0.023
cell matrix adhesion GO:0007160 4 0.023
positive regulation of cellular metabolic process GO:0031325 94 0.023
cell motility GO:0048870 244 0.023
regulation of signal transduction GO:0009966 225 0.023
oocyte differentiation GO:0009994 14 0.023
regulation of mrna metabolic process GO:1903311 6 0.023
multi organism reproductive process GO:0044703 36 0.023
Worm
positive regulation of nucleic acid templated transcription GO:1903508 57 0.023
cell cycle GO:0007049 93 0.023
response to other organism GO:0051707 97 0.023
response to dsrna GO:0043331 7 0.023
regulation of tube size GO:0035150 2 0.022
regulation of nucleic acid templated transcription GO:1903506 213 0.022
Worm
response to biotic stimulus GO:0009607 97 0.022
response to stress GO:0006950 263 0.022
regeneration GO:0031099 91 0.022
regulation of cell shape GO:0008360 1 0.022
regulation of dna templated transcription in response to stress GO:0043620 0 0.022
nuclear transport GO:0051169 4 0.021
regulation of stem cell differentiation GO:2000736 4 0.021
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.021
anterior posterior pattern specification GO:0009952 152 0.021
positive regulation of cellular catabolic process GO:0031331 3 0.021
cell migration GO:0016477 237 0.021
taxis GO:0042330 109 0.021
regulation of circadian rhythm GO:0042752 4 0.021
developmental maturation GO:0021700 34 0.021
response to external biotic stimulus GO:0043207 97 0.021
sensory organ development GO:0007423 393 0.021
regulation of dna templated transcription elongation GO:0032784 3 0.021
developmental growth GO:0048589 166 0.020
chromosome organization GO:0051276 31 0.020
meiotic chromosome segregation GO:0045132 3 0.020
embryonic organ development GO:0048568 381 0.020
amine metabolic process GO:0009308 2 0.020
protein complex subunit organization GO:0071822 46 0.020
Worm
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.020
phagocytosis GO:0006909 3 0.020
dsrna fragmentation GO:0031050 1 0.020
cellular localization GO:0051641 97 0.020
gene silencing by rna GO:0031047 4 0.019
negative regulation of catabolic process GO:0009895 3 0.019
response to drug GO:0042493 3 0.019
positive regulation of rna biosynthetic process GO:1902680 57 0.019
embryonic pattern specification GO:0009880 44 0.019
cytoplasm organization GO:0007028 4 0.019
development of primary female sexual characteristics GO:0046545 4 0.019
apoptotic process involved in development GO:1902742 2 0.019
stem cell development GO:0048864 82 0.019
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.019
programmed cell death GO:0012501 119 0.019
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.019
positive regulation of muscle cell differentiation GO:0051149 1 0.019
cell division GO:0051301 20 0.019
regulation of response to stimulus GO:0048583 269 0.018
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.018
behavior GO:0007610 74 0.018
axon extension GO:0048675 45 0.018
phosphate containing compound metabolic process GO:0006796 108 0.018
mitotic cell cycle GO:0000278 64 0.017
spermatid differentiation GO:0048515 2 0.017
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.017
negative regulation of cellular metabolic process GO:0031324 77 0.017
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.017
female gonad development GO:0008585 4 0.017
stem cell proliferation GO:0072089 4 0.017
transcription from rna polymerase ii promoter GO:0006366 80 0.017
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.017
posttranscriptional gene silencing GO:0016441 3 0.017
ribonucleoside monophosphate catabolic process GO:0009158 4 0.017
spermatid development GO:0007286 2 0.017
transport GO:0006810 220 0.017
vasculature development GO:0001944 278 0.017
regulation of nervous system development GO:0051960 90 0.016
cell aging GO:0007569 2 0.016
regulation of protein complex assembly GO:0043254 3 0.016
atp catabolic process GO:0006200 4 0.016
regulation of chromosome segregation GO:0051983 1 0.016
circulatory system process GO:0003013 87 0.016
regulation of cytokine production GO:0001817 3 0.016
ncrna metabolic process GO:0034660 12 0.016
regulation of multicellular organism growth GO:0040014 4 0.016
cellular protein metabolic process GO:0044267 129 0.016
response to wounding GO:0009611 116 0.016
regulation of cellular response to oxidative stress GO:1900407 2 0.016
regulation of protein catabolic process GO:0042176 1 0.016
internal peptidyl lysine acetylation GO:0018393 2 0.016
protein acylation GO:0043543 3 0.016
mitotic nuclear division GO:0007067 18 0.016
developmental cell growth GO:0048588 52 0.016
macromolecular complex assembly GO:0065003 35 0.016
peptidyl lysine acetylation GO:0018394 2 0.016
regulation of cellular ketone metabolic process GO:0010565 7 0.016
regulation of erk1 and erk2 cascade GO:0070372 4 0.016
nucleic acid templated transcription GO:0097659 181 0.016
Worm
regulation of organ growth GO:0046620 3 0.015
cellular response to external stimulus GO:0071496 2 0.015
locomotory behavior GO:0007626 34 0.015
negative regulation of rna biosynthetic process GO:1902679 45 0.015
positive regulation of macromolecule metabolic process GO:0010604 93 0.015
nucleocytoplasmic transport GO:0006913 4 0.015
single organism metabolic process GO:0044710 217 0.015
regulation of cell activation GO:0050865 1 0.015
regulation of epithelial cell proliferation GO:0050678 3 0.015
negative regulation of translation GO:0017148 1 0.015
single organism localization GO:1902578 225 0.015
positive regulation of myeloid cell differentiation GO:0045639 2 0.015
regulation of anatomical structure morphogenesis GO:0022603 130 0.015
modification of morphology or physiology of other organism GO:0035821 4 0.015
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.015
mesoderm development GO:0007498 88 0.014
cellular carbohydrate metabolic process GO:0044262 4 0.014
regulation of signaling GO:0023051 235 0.014
neuron projection extension GO:1990138 45 0.014
mrna transport GO:0051028 2 0.014
positive regulation of dna templated transcription elongation GO:0032786 1 0.014
macromolecular complex disassembly GO:0032984 1 0.014
Worm
blood vessel development GO:0001568 246 0.014
posttranscriptional gene silencing by rna GO:0035194 3 0.014
regulation of epidermis development GO:0045682 2 0.014
cell morphogenesis involved in differentiation GO:0000904 195 0.014
meiosis i GO:0007127 1 0.014
homeostasis of number of cells GO:0048872 62 0.014
regulation of cytoplasmic transport GO:1903649 4 0.014
cell maturation GO:0048469 23 0.014
synapse assembly GO:0007416 9 0.014
modification of morphology or physiology of other organism involved in symbiotic interaction GO:0051817 4 0.013
positive regulation of synapse assembly GO:0051965 1 0.013
wound healing GO:0042060 90 0.013
nuclear export GO:0051168 1 0.013
central nervous system neuron differentiation GO:0021953 74 0.013
response to uv GO:0009411 3 0.013
purine nucleoside monophosphate catabolic process GO:0009128 4 0.013
heterocycle biosynthetic process GO:0018130 215 0.013
Worm
cellular response to organic cyclic compound GO:0071407 38 0.013
synaptic vesicle endocytosis GO:0048488 1 0.013
rna transport GO:0050658 2 0.013
response to alkaloid GO:0043279 2 0.013
negative regulation of cellular biosynthetic process GO:0031327 55 0.013
small molecule metabolic process GO:0044281 77 0.013
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
synaptic transmission GO:0007268 35 0.013
regulation of multicellular organismal process GO:0051239 277 0.013
Worm
positive regulation of epithelial cell proliferation GO:0050679 1 0.013
blood vessel morphogenesis GO:0048514 216 0.013
intracellular estrogen receptor signaling pathway GO:0030520 3 0.013
establishment of synaptic vesicle localization GO:0097480 1 0.013
macromolecule deacylation GO:0098732 3 0.013
microtubule based process GO:0007017 60 0.013
regulation of stem cell proliferation GO:0072091 2 0.012
establishment of protein localization to organelle GO:0072594 4 0.012
cellular response to lipopolysaccharide GO:0071222 3 0.012
anterior posterior axis specification GO:0009948 20 0.012
positive regulation of response to stimulus GO:0048584 80 0.012
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.012
positive regulation of catabolic process GO:0009896 4 0.012
cellular protein complex disassembly GO:0043624 1 0.012
cellular biogenic amine metabolic process GO:0006576 2 0.012
epithelial cell differentiation GO:0030855 116 0.012
regulation of metal ion transport GO:0010959 4 0.012
angiogenesis GO:0001525 158 0.012
regulation of nucleotide catabolic process GO:0030811 2 0.012
establishment of rna localization GO:0051236 3 0.012
synaptic vesicle transport GO:0048489 1 0.012
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.012
regulation of protein metabolic process GO:0051246 56 0.012
developmental growth involved in morphogenesis GO:0060560 86 0.012
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.012
positive regulation of cellular component biogenesis GO:0044089 3 0.011
cellular amine metabolic process GO:0044106 2 0.011
electron transport chain GO:0022900 2 0.011
blood circulation GO:0008015 87 0.011
protein deacetylation GO:0006476 3 0.011
actin polymerization or depolymerization GO:0008154 2 0.011
protein import into nucleus GO:0006606 3 0.011
intracellular signal transduction GO:0035556 85 0.011
reproduction GO:0000003 40 0.011
Worm
regulation of neurogenesis GO:0050767 87 0.011
cell cycle g2 m phase transition GO:0044839 4 0.011
cell proliferation GO:0008283 80 0.011
negative regulation of multi organism process GO:0043901 3 0.011
protein polymerization GO:0051258 4 0.011
organic acid metabolic process GO:0006082 31 0.011
positive regulation of rna metabolic process GO:0051254 59 0.011
multicellular organism growth GO:0035264 4 0.011
regulation of hematopoietic progenitor cell differentiation GO:1901532 1 0.011
cellular response to organic substance GO:0071310 105 0.011
gene silencing by mirna GO:0035195 3 0.010
female sex differentiation GO:0046660 4 0.010
positive regulation of cell activation GO:0050867 1 0.010
cell fate specification GO:0001708 68 0.010
lamellipodium assembly GO:0030032 1 0.010
phosphorus metabolic process GO:0006793 109 0.010
production of small rna involved in gene silencing by rna GO:0070918 1 0.010
multicellular organism reproduction GO:0032504 35 0.010
Worm
skeletal system development GO:0001501 181 0.010
protein deacylation GO:0035601 3 0.010
skeletal muscle tissue development GO:0007519 67 0.010
positive regulation of signal transduction GO:0009967 56 0.010
regulation of cellular protein metabolic process GO:0032268 52 0.010
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.010
macromolecule localization GO:0033036 54 0.010
cell death GO:0008219 121 0.010
entrainment of circadian clock GO:0009649 2 0.010

sfrs3b disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
motor neuron disease DOID:231 0 0.084
central nervous system disease DOID:331 0 0.084
amyotrophic lateral sclerosis DOID:332 0 0.084
disease of anatomical entity DOID:7 0 0.084
neurodegenerative disease DOID:1289 0 0.084
nervous system disease DOID:863 0 0.084
cancer DOID:162 0 0.033
disease of cellular proliferation DOID:14566 0 0.033
organ system cancer DOID:0050686 0 0.033
musculoskeletal system disease DOID:17 0 0.020
disease of metabolism DOID:0014667 0 0.016
muscular disease DOID:0080000 0 0.014
myopathy DOID:423 0 0.014
muscle tissue disease DOID:66 0 0.014