Danio rerio

0 known processes

opn1mw4

opsin 1 (cone pigments), medium-wave-sensitive, 4

(Aliases: wu:fk64b02,zfgr2,fk64b02,RH2-4,grops2)

opn1mw4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
sensory organ development GO:0007423 393 0.395
cgmp biosynthetic process GO:0006182 7 0.305
larval development GO:0002164 2 0.225
vasculature development GO:0001944 278 0.201
nucleobase containing compound biosynthetic process GO:0034654 205 0.198
response to external stimulus GO:0009605 264 0.181
Zebrafish
cellular nitrogen compound metabolic process GO:0034641 290 0.177
regionalization GO:0003002 274 0.160
photoreceptor cell differentiation GO:0046530 55 0.153
cellular aromatic compound metabolic process GO:0006725 295 0.143
retina development in camera type eye GO:0060041 146 0.139
organic cyclic compound metabolic process GO:1901360 301 0.131
ion transport GO:0006811 114 0.128
nucleic acid metabolic process GO:0090304 244 0.126
maintenance of location GO:0051235 4 0.119
Zebrafish
cellular nitrogen compound biosynthetic process GO:0044271 218 0.113
signal transduction GO:0007165 455 0.111
Zebrafish
regulation of nitrogen compound metabolic process GO:0051171 251 0.110
aromatic compound biosynthetic process GO:0019438 217 0.102
eye photoreceptor cell differentiation GO:0001754 45 0.099
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.091
heterocycle metabolic process GO:0046483 290 0.085
gene expression GO:0010467 252 0.083
single organism metabolic process GO:0044710 217 0.082
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.082
aging GO:0007568 2 0.078
cellular macromolecule biosynthetic process GO:0034645 224 0.076
organonitrogen compound metabolic process GO:1901564 74 0.075
immune system development GO:0002520 191 0.075
biosynthetic process GO:0009058 294 0.074
cellular macromolecule metabolic process GO:0044260 391 0.074
heterocycle biosynthetic process GO:0018130 215 0.070
multicellular organism growth GO:0035264 4 0.069
sensory organ morphogenesis GO:0090596 200 0.067
retina morphogenesis in camera type eye GO:0060042 79 0.067
camera type eye photoreceptor cell differentiation GO:0060219 19 0.066
eye development GO:0001654 277 0.066
generation of neurons GO:0048699 385 0.066
cell morphogenesis GO:0000902 289 0.065
cell projection organization GO:0030030 284 0.065
neural retina development GO:0003407 49 0.064
chordate embryonic development GO:0043009 271 0.059
digestive tract morphogenesis GO:0048546 231 0.058
neuron differentiation GO:0030182 353 0.058
neuron development GO:0048666 262 0.058
nitrogen compound metabolic process GO:0006807 319 0.057
organic cyclic compound biosynthetic process GO:1901362 223 0.057
regulation of nucleic acid templated transcription GO:1903506 213 0.057
regulation of metabolic process GO:0019222 359 0.056
cgmp metabolic process GO:0046068 7 0.056
organic substance biosynthetic process GO:1901576 289 0.055
somitogenesis GO:0001756 87 0.055
cellular response to radiation GO:0071478 4 0.055
Zebrafish
regulation of multicellular organism growth GO:0040014 4 0.052
circadian sleep wake cycle GO:0042745 2 0.052
small molecule metabolic process GO:0044281 77 0.052
tube morphogenesis GO:0035239 349 0.051
regulation of gene expression GO:0010468 265 0.050
negative regulation of biological process GO:0048519 304 0.049
Zebrafish
carbohydrate derivative metabolic process GO:1901135 61 0.047
neuron projection morphogenesis GO:0048812 161 0.046
regulation of transcription dna templated GO:0006355 213 0.046
positive regulation of cell cycle GO:0045787 3 0.045
negative regulation of multicellular organismal process GO:0051241 69 0.045
nucleobase containing compound metabolic process GO:0006139 274 0.045
regulation of cell communication GO:0010646 232 0.044
cyclic purine nucleotide metabolic process GO:0052652 18 0.044
regulation of signaling GO:0023051 235 0.043
regulation of sequestering of calcium ion GO:0051282 4 0.043
Zebrafish
hormone secretion GO:0046879 2 0.042
single organism transport GO:0044765 206 0.042
anterior posterior pattern specification GO:0009952 152 0.041
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.041
transmembrane transport GO:0055085 120 0.040
oxoacid metabolic process GO:0043436 31 0.040
lipid storage GO:0019915 1 0.040
regulation of cellular biosynthetic process GO:0031326 245 0.040
morphogenesis of an epithelium GO:0002009 333 0.040
eye morphogenesis GO:0048592 144 0.040
regulation of primary metabolic process GO:0080090 311 0.037
establishment of localization GO:0051234 244 0.037
cellular protein catabolic process GO:0044257 4 0.036
epithelial tube morphogenesis GO:0060562 148 0.036
regulation of macromolecule metabolic process GO:0060255 317 0.036
positive regulation of map kinase activity GO:0043406 3 0.036
positive regulation of muscle organ development GO:0048636 1 0.035
epithelial cell differentiation GO:0030855 116 0.035
transcription from rna polymerase ii promoter GO:0006366 80 0.035
transcription dna templated GO:0006351 181 0.034
macromolecule biosynthetic process GO:0009059 227 0.034
hormone transport GO:0009914 2 0.034
tissue remodeling GO:0048771 4 0.033
cell morphogenesis involved in differentiation GO:0000904 195 0.032
modification dependent protein catabolic process GO:0019941 3 0.032
camera type eye development GO:0043010 222 0.032
phosphate containing compound metabolic process GO:0006796 108 0.031
cell part morphogenesis GO:0032990 246 0.031
cell migration GO:0016477 237 0.031
regulation of response to stimulus GO:0048583 269 0.030
central nervous system development GO:0007417 387 0.029
cell surface receptor signaling pathway GO:0007166 325 0.029
Zebrafish
positive regulation of cellular catabolic process GO:0031331 3 0.029
regulation of purine nucleotide catabolic process GO:0033121 2 0.029
cellular biosynthetic process GO:0044249 286 0.028
regulation of rna biosynthetic process GO:2001141 213 0.028
organophosphate metabolic process GO:0019637 37 0.028
embryonic organ development GO:0048568 381 0.028
ribonucleotide metabolic process GO:0009259 27 0.028
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.028
oocyte maturation GO:0001556 4 0.028
cellular response to nutrient levels GO:0031669 2 0.028
regulation of cellular metabolic process GO:0031323 320 0.028
carboxylic acid metabolic process GO:0019752 22 0.027
segmentation GO:0035282 97 0.027
single organism biosynthetic process GO:0044711 71 0.027
organic acid metabolic process GO:0006082 31 0.027
homeostatic process GO:0042592 142 0.026
Zebrafish
ribose phosphate metabolic process GO:0019693 27 0.026
adult behavior GO:0030534 2 0.026
regulation of localization GO:0032879 104 0.026
Zebrafish
gastrulation GO:0007369 208 0.026
rna metabolic process GO:0016070 219 0.025
embryonic organ morphogenesis GO:0048562 274 0.025
brain development GO:0007420 293 0.025
nucleotide biosynthetic process GO:0009165 21 0.025
single organism organelle organization GO:1902589 199 0.024
negative regulation of macromolecule metabolic process GO:0010605 76 0.024
camera type eye morphogenesis GO:0048593 108 0.024
regulation of signal transduction GO:0009966 225 0.024
regulation of cell differentiation GO:0045595 142 0.024
regulation of macromolecule biosynthetic process GO:0010556 225 0.024
organonitrogen compound biosynthetic process GO:1901566 47 0.023
cell projection morphogenesis GO:0048858 244 0.023
digestive tract development GO:0048565 265 0.023
organic acid catabolic process GO:0016054 3 0.023
positive regulation of neural precursor cell proliferation GO:2000179 1 0.023
regulation of molecular function GO:0065009 70 0.023
hatching GO:0035188 4 0.023
cellular response to extracellular stimulus GO:0031668 2 0.022
sequestering of calcium ion GO:0051208 3 0.022
Zebrafish
hemopoiesis GO:0030097 183 0.022
nucleobase containing small molecule metabolic process GO:0055086 32 0.022
meiotic cell cycle process GO:1903046 3 0.022
neuron projection development GO:0031175 180 0.022
proteasomal protein catabolic process GO:0010498 2 0.022
embryonic heart tube development GO:0035050 133 0.022
regulation of rna metabolic process GO:0051252 224 0.022
phosphorus metabolic process GO:0006793 109 0.022
head development GO:0060322 303 0.021
response to abiotic stimulus GO:0009628 122 0.021
Zebrafish
positive regulation of catabolic process GO:0009896 4 0.021
sequestering of metal ion GO:0051238 3 0.021
Zebrafish
somite development GO:0061053 96 0.021
response to chemical GO:0042221 320 0.021
regulation of nucleotide catabolic process GO:0030811 2 0.020
regulation of neurogenesis GO:0050767 87 0.020
fatty acid transport GO:0015908 1 0.020
nucleic acid templated transcription GO:0097659 181 0.020
negative regulation of protein serine threonine kinase activity GO:0071901 2 0.020
meiotic nuclear division GO:0007126 4 0.020
retina vasculature development in camera type eye GO:0061298 2 0.019
regulation of protein complex assembly GO:0043254 3 0.019
stem cell proliferation GO:0072089 4 0.019
heart looping GO:0001947 94 0.019
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.019
hematopoietic or lymphoid organ development GO:0048534 191 0.019
cellular response to unfolded protein GO:0034620 2 0.019
regulation of multicellular organismal development GO:2000026 223 0.019
regulation of inflammatory response GO:0050727 2 0.019
regulation of cell fate commitment GO:0010453 22 0.019
purine ribonucleotide metabolic process GO:0009150 27 0.018
regulation of nucleoside metabolic process GO:0009118 2 0.018
neurological system process GO:0050877 62 0.018
sodium ion transport GO:0006814 24 0.018
regulation of protein transport GO:0051223 3 0.018
rna biosynthetic process GO:0032774 181 0.018
cellular response to starvation GO:0009267 1 0.018
muscle tissue development GO:0060537 110 0.018
modification dependent macromolecule catabolic process GO:0043632 3 0.018
system process GO:0003008 185 0.018
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.018
positive regulation of rna biosynthetic process GO:1902680 57 0.018
muscle structure development GO:0061061 196 0.017
developmental programmed cell death GO:0010623 4 0.017
cell motility GO:0048870 244 0.017
mesenchymal cell differentiation GO:0048762 87 0.017
transport GO:0006810 220 0.017
cation transport GO:0006812 81 0.017
positive regulation of striated muscle tissue development GO:0045844 1 0.017
spemann organizer formation at the embryonic shield GO:0060063 2 0.017
skeletal system development GO:0001501 181 0.017
cellular ketone metabolic process GO:0042180 11 0.017
ubiquitin dependent protein catabolic process GO:0006511 3 0.017
activation of mapk activity GO:0000187 3 0.016
peptide transport GO:0015833 1 0.016
pancreas development GO:0031016 84 0.016
er nucleus signaling pathway GO:0006984 2 0.016
purine nucleotide metabolic process GO:0006163 27 0.016
purine containing compound metabolic process GO:0072521 29 0.016
heart morphogenesis GO:0003007 156 0.016
female gonad development GO:0008585 4 0.016
regulation of stem cell proliferation GO:0072091 2 0.016
regulation of transmembrane transporter activity GO:0022898 2 0.015
regulation of metal ion transport GO:0010959 4 0.015
negative regulation of gastrulation GO:2000542 11 0.015
endoderm development GO:0007492 49 0.015
regulation of cell activation GO:0050865 1 0.015
negative regulation of mitosis GO:0045839 3 0.015
response to unfolded protein GO:0006986 2 0.015
negative regulation of defense response GO:0031348 2 0.015
ion transmembrane transport GO:0034220 91 0.015
positive regulation of cellular biosynthetic process GO:0031328 68 0.015
regulation of neurotransmitter transport GO:0051588 1 0.015
photoreceptor cell outer segment organization GO:0035845 9 0.015
striated muscle cell differentiation GO:0051146 129 0.015
fatty acid beta oxidation GO:0006635 1 0.015
digestive system development GO:0055123 289 0.015
circadian sleep wake cycle process GO:0022410 2 0.015
determination of heart left right asymmetry GO:0061371 117 0.014
axonogenesis GO:0007409 152 0.014
negative regulation of nuclear division GO:0051784 3 0.014
negative regulation of gene expression GO:0010629 65 0.014
dorsal ventral pattern formation GO:0009953 125 0.014
muscle fiber development GO:0048747 52 0.014
cellular component movement GO:0006928 335 0.014
dna templated transcription initiation GO:0006352 1 0.014
startle response GO:0001964 4 0.014
regulation of transporter activity GO:0032409 2 0.014
cell volume homeostasis GO:0006884 1 0.014
immune system process GO:0002376 241 0.014
specification of symmetry GO:0009799 204 0.014
enzyme linked receptor protein signaling pathway GO:0007167 106 0.014
embryo development ending in birth or egg hatching GO:0009792 271 0.014
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.014
ribonucleotide biosynthetic process GO:0009260 20 0.013
organelle organization GO:0006996 227 0.013
negative regulation of cell fate specification GO:0009996 11 0.013
regulation of ion transmembrane transporter activity GO:0032412 2 0.013
negative regulation of cellular process GO:0048523 283 0.013
Zebrafish
regulation of establishment of protein localization GO:0070201 4 0.013
regulation of circadian rhythm GO:0042752 4 0.013
cellular component morphogenesis GO:0032989 336 0.013
cyclic nucleotide metabolic process GO:0009187 18 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
embryonic heart tube morphogenesis GO:0003143 108 0.013
small molecule catabolic process GO:0044282 3 0.013
protein metabolic process GO:0019538 183 0.013
negative regulation of sequestering of calcium ion GO:0051283 4 0.013
Zebrafish
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.013
regulation of circadian sleep wake cycle GO:0042749 1 0.013
phosphorylation GO:0016310 69 0.013
amine metabolic process GO:0009308 2 0.012
photoreceptor cell development GO:0042461 40 0.012
regulation of blood vessel size GO:0050880 2 0.012
maturation of ssu rrna GO:0030490 1 0.012
purine containing compound biosynthetic process GO:0072522 20 0.012
protein localization to nucleus GO:0034504 3 0.012
single organism localization GO:1902578 225 0.012
purine ribonucleotide biosynthetic process GO:0009152 20 0.012
g protein coupled receptor signaling pathway GO:0007186 74 0.012
Zebrafish
negative regulation of blood circulation GO:1903523 2 0.012
cyclic nucleotide biosynthetic process GO:0009190 18 0.012
axon development GO:0061564 166 0.012
nucleotide metabolic process GO:0009117 28 0.012
cellular lipid catabolic process GO:0044242 3 0.012
negative regulation of cell fate commitment GO:0010454 13 0.012
negative regulation of signaling GO:0023057 96 0.012
metal ion homeostasis GO:0055065 26 0.012
Zebrafish
cellular protein metabolic process GO:0044267 129 0.012
negative regulation of secretion by cell GO:1903531 2 0.012
determination of bilateral symmetry GO:0009855 204 0.012
microtubule based process GO:0007017 60 0.012
sleep GO:0030431 1 0.012
positive regulation of signaling GO:0023056 56 0.011
localization of cell GO:0051674 244 0.011
carbohydrate derivative biosynthetic process GO:1901137 43 0.011
regulation of dna replication GO:0006275 3 0.011
cellular amine metabolic process GO:0044106 2 0.011
regulation of neural precursor cell proliferation GO:2000177 3 0.011
positive regulation of transport GO:0051050 2 0.011
negative regulation of hormone secretion GO:0046888 2 0.011
spermatid development GO:0007286 2 0.011
regulation of catalytic activity GO:0050790 55 0.011
ovulation cycle GO:0042698 2 0.011
leukocyte mediated cytotoxicity GO:0001909 1 0.011
developmental growth GO:0048589 166 0.011
response to topologically incorrect protein GO:0035966 2 0.011
entrainment of circadian clock GO:0009649 2 0.011
cation transmembrane transport GO:0098655 65 0.011
response to carbohydrate GO:0009743 3 0.011
female sex differentiation GO:0046660 4 0.011
positive regulation of cellular component biogenesis GO:0044089 3 0.011
regulation of cytoplasmic transport GO:1903649 4 0.011
cytokinesis GO:0000910 3 0.011
cellular amino acid metabolic process GO:0006520 7 0.011
regulation of blood pressure GO:0008217 1 0.011
mononuclear cell proliferation GO:0032943 1 0.011
dicarboxylic acid metabolic process GO:0043648 1 0.011
positive regulation of cell communication GO:0010647 56 0.011
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.011
regulation of cellular ketone metabolic process GO:0010565 7 0.011
single organism nuclear import GO:1902593 3 0.011
positive regulation of gliogenesis GO:0014015 2 0.011
regulation of intracellular protein transport GO:0033157 3 0.011
skeletal system morphogenesis GO:0048705 102 0.011
leukocyte proliferation GO:0070661 1 0.011
carbohydrate homeostasis GO:0033500 1 0.011
regulation of endodermal cell differentiation GO:1903224 15 0.011
bmp signaling pathway GO:0030509 52 0.010
intracellular signal transduction GO:0035556 85 0.010
wnt signaling pathway GO:0016055 80 0.010
pathway restricted smad protein phosphorylation GO:0060389 1 0.010
guanosine containing compound catabolic process GO:1901069 2 0.010
membrane repolarization GO:0086009 2 0.010
embryonic camera type eye development GO:0031076 29 0.010
embryonic skeletal system development GO:0048706 97 0.010
regulation of protein catabolic process GO:0042176 1 0.010
locomotion GO:0040011 313 0.010
ovulation cycle process GO:0022602 2 0.010
regulation of protein metabolic process GO:0051246 56 0.010
angiogenesis GO:0001525 158 0.010
response to uv GO:0009411 3 0.010
macromolecule modification GO:0043412 111 0.010
positive regulation of gene expression GO:0010628 71 0.010
somatic stem cell maintenance GO:0035019 1 0.010
regulation of phosphate metabolic process GO:0019220 43 0.010
ear development GO:0043583 127 0.010

opn1mw4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
sensory system disease DOID:0050155 0 0.013
disease of anatomical entity DOID:7 0 0.013
eye and adnexa disease DOID:1492 0 0.013
nervous system disease DOID:863 0 0.013
eye disease DOID:5614 0 0.013
disease of metabolism DOID:0014667 0 0.011