Danio rerio

57 known processes

cald1

caldesmon 1

(Aliases: si:dkey-206m15.7)

cald1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
vasculature development GO:0001944 278 0.134
lymph vessel morphogenesis GO:0036303 25 0.117
sequestering of metal ion GO:0051238 3 0.103
regulation of protein catabolic process GO:0042176 1 0.084
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.079
regulation of meiotic cell cycle GO:0051445 1 0.065
meiotic nuclear division GO:0007126 4 0.061
regulation of tube size GO:0035150 2 0.060
modification dependent macromolecule catabolic process GO:0043632 3 0.059
cell substrate adhesion GO:0031589 4 0.057
lymph vessel development GO:0001945 27 0.056
cellular protein catabolic process GO:0044257 4 0.055
regulation of epithelial cell proliferation GO:0050678 3 0.053
regulation of glial cell differentiation GO:0045685 4 0.052
regulation of cytoplasmic transport GO:1903649 4 0.052
glial cell migration GO:0008347 3 0.051
positive regulation of extrinsic apoptotic signaling pathway GO:2001238 1 0.051
positive regulation of cell cycle GO:0045787 3 0.051
response to topologically incorrect protein GO:0035966 2 0.050
sprouting angiogenesis GO:0002040 53 0.050
positive regulation of cellular component biogenesis GO:0044089 3 0.050
phosphatidylinositol mediated signaling GO:0048015 2 0.049
hepaticobiliary system development GO:0061008 98 0.049
positive regulation of inflammatory response GO:0050729 1 0.049
modification dependent protein catabolic process GO:0019941 3 0.048
ubiquitin dependent protein catabolic process GO:0006511 3 0.046
regulation of blood vessel size GO:0050880 2 0.046
mitotic cell cycle GO:0000278 64 0.045
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.044
regulation of protein transport GO:0051223 3 0.044
regulation of cell matrix adhesion GO:0001952 1 0.044
smooth muscle contraction GO:0006939 2 0.044
proteasomal protein catabolic process GO:0010498 2 0.043
cellular response to external stimulus GO:0071496 2 0.042
eye development GO:0001654 277 0.042
inositol lipid mediated signaling GO:0048017 2 0.041
positive regulation of secretion GO:0051047 1 0.041
cellular component assembly GO:0022607 170 0.040
macrophage chemotaxis GO:0048246 3 0.040
cellular component movement GO:0006928 335 0.040
cellular response to nutrient levels GO:0031669 2 0.039
locomotion GO:0040011 313 0.039
camera type eye development GO:0043010 222 0.039
response to stress GO:0006950 263 0.038
cell matrix adhesion GO:0007160 4 0.037
positive regulation of transport GO:0051050 2 0.037
positive regulation of cellular catabolic process GO:0031331 3 0.037
regulation of cellular metabolic process GO:0031323 320 0.037
positive regulation of endothelial cell proliferation GO:0001938 1 0.037
maintenance of location GO:0051235 4 0.037
positive regulation of epithelial cell proliferation GO:0050679 1 0.036
aging GO:0007568 2 0.036
regulation of cell substrate adhesion GO:0010810 1 0.035
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.035
digestive system development GO:0055123 289 0.035
ovulation cycle process GO:0022602 2 0.033
developmental programmed cell death GO:0010623 4 0.033
blood vessel development GO:0001568 246 0.033
positive regulation of cellular process GO:0048522 201 0.032
sequestering of calcium ion GO:0051208 3 0.032
regulation of establishment of protein localization GO:0070201 4 0.032
regulation of retina development in camera type eye GO:1902866 2 0.032
regulation of wound healing GO:0061041 2 0.032
regulation of organelle assembly GO:1902115 4 0.032
positive regulation of apoptotic signaling pathway GO:2001235 1 0.031
positive regulation of blood circulation GO:1903524 2 0.031
heart development GO:0007507 313 0.031
extrinsic apoptotic signaling pathway GO:0097191 3 0.031
actin filament based process GO:0030029 64 0.029
female gonad development GO:0008585 4 0.029
digestive tract development GO:0048565 265 0.028
pigmentation GO:0043473 85 0.028
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.028
hypothalamus cell differentiation GO:0021979 4 0.028
cell migration GO:0016477 237 0.028
response to wounding GO:0009611 116 0.027
defense response GO:0006952 47 0.027
protein import GO:0017038 3 0.027
cellular response to extracellular stimulus GO:0031668 2 0.027
regulation of cell shape GO:0008360 1 0.026
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.026
osteoclast differentiation GO:0030316 1 0.026
positive regulation of cell substrate adhesion GO:0010811 1 0.026
regulation of cytokine production GO:0001817 3 0.026
regulation of blood pressure GO:0008217 1 0.025
protein localization to nucleus GO:0034504 3 0.025
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 2 0.025
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.025
wound healing GO:0042060 90 0.025
response to other organism GO:0051707 97 0.025
establishment of protein localization to organelle GO:0072594 4 0.025
positive regulation of catabolic process GO:0009896 4 0.025
regulation of biological quality GO:0065008 263 0.025
multicellular organismal metabolic process GO:0044236 2 0.024
circulatory system process GO:0003013 87 0.024
regulation of nucleocytoplasmic transport GO:0046822 2 0.024
signal transduction GO:0007165 455 0.024
apoptotic process GO:0006915 116 0.024
endocrine process GO:0050886 2 0.024
muscle structure development GO:0061061 196 0.024
phagocytosis GO:0006909 3 0.024
i kappab kinase nf kappab signaling GO:0007249 4 0.024
astrocyte differentiation GO:0048708 1 0.023
negative regulation of gliogenesis GO:0014014 1 0.023
lymphangiogenesis GO:0001946 25 0.023
positive regulation of secretion by cell GO:1903532 1 0.023
organelle assembly GO:0070925 110 0.023
cellular response to vascular endothelial growth factor stimulus GO:0035924 3 0.023
multicellular organismal macromolecule metabolic process GO:0044259 2 0.023
regulation of systemic arterial blood pressure GO:0003073 1 0.023
single organism localization GO:1902578 225 0.023
ameboidal type cell migration GO:0001667 143 0.022
negative regulation of secretion GO:0051048 2 0.022
regulation of reactive oxygen species metabolic process GO:2000377 2 0.022
regulation of phospholipase c activity GO:1900274 1 0.022
embryo development ending in birth or egg hatching GO:0009792 271 0.022
mitotic sister chromatid segregation GO:0000070 6 0.022
spindle assembly GO:0051225 2 0.022
ovarian follicle development GO:0001541 2 0.022
protein secretion GO:0009306 1 0.022
development of primary female sexual characteristics GO:0046545 4 0.021
release of sequestered calcium ion into cytosol GO:0051209 3 0.021
cellular response to starvation GO:0009267 1 0.021
epithelial cell differentiation GO:0030855 116 0.021
positive regulation of cytoskeleton organization GO:0051495 3 0.021
negative regulation of sequestering of calcium ion GO:0051283 4 0.021
single organism nuclear import GO:1902593 3 0.021
larval development GO:0002164 2 0.021
spermatid differentiation GO:0048515 2 0.021
calcium ion homeostasis GO:0055074 19 0.021
meiosis ii GO:0007135 1 0.021
spindle assembly involved in mitosis GO:0090307 1 0.021
liver development GO:0001889 96 0.020
antimicrobial humoral response GO:0019730 2 0.020
nucleocytoplasmic transport GO:0006913 4 0.020
cellular component biogenesis GO:0044085 178 0.020
regulation of protein targeting GO:1903533 2 0.020
protein import into nucleus GO:0006606 3 0.020
blood coagulation GO:0007596 12 0.020
regulation of inflammatory response GO:0050727 2 0.020
system process GO:0003008 185 0.019
central nervous system myelin formation GO:0032289 1 0.019
g1 s transition of mitotic cell cycle GO:0000082 1 0.019
regulation of endothelial cell proliferation GO:0001936 1 0.019
blood vessel morphogenesis GO:0048514 216 0.019
regulation of sequestering of calcium ion GO:0051282 4 0.019
synaptic transmission cholinergic GO:0007271 4 0.019
organelle organization GO:0006996 227 0.019
negative regulation of protein serine threonine kinase activity GO:0071901 2 0.018
mitotic dna integrity checkpoint GO:0044774 4 0.018
signal transduction in absence of ligand GO:0038034 1 0.018
negative regulation of protein complex assembly GO:0031333 1 0.018
response to antibiotic GO:0046677 1 0.018
collagen metabolic process GO:0032963 2 0.018
tissue remodeling GO:0048771 4 0.018
extrinsic apoptotic signaling pathway via death domain receptors GO:0008625 1 0.018
sensory organ development GO:0007423 393 0.018
embryonic organ morphogenesis GO:0048562 274 0.018
cell substrate junction assembly GO:0007044 2 0.018
ventricular cardiac muscle tissue development GO:0003229 3 0.018
regulation of metal ion transport GO:0010959 4 0.018
negative regulation of secretion by cell GO:1903531 2 0.018
myeloid leukocyte migration GO:0097529 12 0.018
venous blood vessel morphogenesis GO:0048845 3 0.018
phototransduction GO:0007602 2 0.017
gland development GO:0048732 143 0.017
cytosolic calcium ion transport GO:0060401 3 0.017
regulation of protein localization to nucleus GO:1900180 2 0.017
regulation of dna replication GO:0006275 3 0.017
positive regulation of jnk cascade GO:0046330 3 0.017
phospholipase c activating g protein coupled receptor signaling pathway GO:0007200 2 0.017
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.017
cytokinesis GO:0000910 3 0.017
regeneration GO:0031099 91 0.017
stem cell proliferation GO:0072089 4 0.017
regulation of binding GO:0051098 3 0.017
regulation of protein import into nucleus GO:0042306 2 0.017
renal system process involved in regulation of systemic arterial blood pressure GO:0003071 1 0.017
ventricular cardiac muscle tissue morphogenesis GO:0055010 2 0.016
trigeminal nerve development GO:0021559 3 0.016
regulation of protein complex assembly GO:0043254 3 0.016
phosphatidylinositol 3 kinase signaling GO:0014065 2 0.016
regulation of calcium ion transport GO:0051924 2 0.016
collagen fibril organization GO:0030199 1 0.016
cardiac atrium development GO:0003230 4 0.016
response to external biotic stimulus GO:0043207 97 0.016
dna catabolic process GO:0006308 1 0.016
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.016
response to unfolded protein GO:0006986 2 0.016
retina development in camera type eye GO:0060041 146 0.016
tube morphogenesis GO:0035239 349 0.016
regulation of locomotion GO:0040012 55 0.016
regulation of membrane potential GO:0042391 23 0.015
dorsal ventral pattern formation GO:0009953 125 0.015
regulation of oligodendrocyte differentiation GO:0048713 1 0.015
positive regulation of cell adhesion GO:0045785 1 0.015
convergent extension involved in gastrulation GO:0060027 71 0.015
positive regulation of gtp catabolic process GO:0033126 1 0.015
calcium ion transport into cytosol GO:0060402 3 0.015
cation homeostasis GO:0055080 33 0.015
auditory receptor cell fate commitment GO:0009912 4 0.015
sympathetic nervous system development GO:0048485 3 0.015
regulation of organ growth GO:0046620 3 0.015
negative regulation of epithelial cell proliferation GO:0050680 1 0.014
actin filament organization GO:0007015 15 0.014
actin cytoskeleton organization GO:0030036 63 0.014
positive regulation of myeloid cell differentiation GO:0045639 2 0.014
cytoskeleton organization GO:0007010 96 0.014
mitochondrion organization GO:0007005 4 0.014
collagen biosynthetic process GO:0032964 2 0.014
nuclear import GO:0051170 3 0.014
regulation of cellular amino acid metabolic process GO:0006521 0 0.014
locomotor rhythm GO:0045475 3 0.014
defense response to fungus GO:0050832 2 0.014
regulation of cellular amine metabolic process GO:0033238 0 0.014
chordate embryonic development GO:0043009 271 0.014
response to organic substance GO:0010033 153 0.014
cellular response to oxygen levels GO:0071453 1 0.014
hormone secretion GO:0046879 2 0.014
regulation of erk1 and erk2 cascade GO:0070372 4 0.014
regulation of purine nucleotide catabolic process GO:0033121 2 0.014
regulation of reproductive process GO:2000241 4 0.014
meiotic cell cycle process GO:1903046 3 0.014
positive regulation of biological process GO:0048518 253 0.014
negative regulation of cytoplasmic transport GO:1903650 2 0.014
regulation of neuronal synaptic plasticity GO:0048168 1 0.014
regulation of cellular component movement GO:0051270 55 0.014
regulation of vascular endothelial growth factor receptor signaling pathway GO:0030947 8 0.013
negative regulation of protein processing GO:0010955 10 0.013
sensory perception of chemical stimulus GO:0007606 3 0.013
regulation of cellular protein catabolic process GO:1903362 1 0.013
epidermal cell fate specification GO:0009957 4 0.013
cardiac atrium morphogenesis GO:0003209 2 0.013
negative regulation of defense response GO:0031348 2 0.013
regulation of intracellular protein transport GO:0033157 3 0.013
cell death GO:0008219 121 0.013
response to uv GO:0009411 3 0.013
epithelial tube morphogenesis GO:0060562 148 0.013
negative regulation of protein kinase activity GO:0006469 4 0.013
apoptotic process involved in morphogenesis GO:0060561 2 0.013
cell cycle g1 s phase transition GO:0044843 1 0.013
positive regulation of phospholipase c activity GO:0010863 1 0.013
cellular amine metabolic process GO:0044106 2 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
positive regulation of cell activation GO:0050867 1 0.013
xenobiotic metabolic process GO:0006805 4 0.013
blood circulation GO:0008015 87 0.013
osteoclast development GO:0036035 1 0.013
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.013
vascular endothelial growth factor receptor signaling pathway GO:0048010 13 0.012
divalent inorganic cation homeostasis GO:0072507 22 0.012
regulation of neural retina development GO:0061074 2 0.012
angiogenesis GO:0001525 158 0.012
regulation of cell motility GO:2000145 46 0.012
sensory perception of smell GO:0007608 2 0.012
regulation of hormone secretion GO:0046883 2 0.012
neuronal stem cell maintenance GO:0097150 2 0.012
negative regulation of catabolic process GO:0009895 3 0.012
death GO:0016265 121 0.012
interspecies interaction between organisms GO:0044419 4 0.012
venous endothelial cell migration involved in lymph vessel development GO:0060855 4 0.012
hormone transport GO:0009914 2 0.012
response to external stimulus GO:0009605 264 0.012
peptide transport GO:0015833 1 0.012
regulation of transcription from rna polymerase ii promoter in response to oxidative stress GO:0043619 0 0.012
transcription from rna polymerase ii promoter GO:0006366 80 0.012
regulation of hematopoietic progenitor cell differentiation GO:1901532 1 0.012
immune system process GO:0002376 241 0.012
positive regulation of neuron death GO:1901216 1 0.012
positive regulation of cell division GO:0051781 2 0.012
regulation of lipase activity GO:0060191 2 0.011
positive regulation of epithelial cell migration GO:0010634 2 0.011
regulation of stem cell proliferation GO:0072091 2 0.011
notch signaling pathway GO:0007219 35 0.011
extrinsic apoptotic signaling pathway in absence of ligand GO:0097192 1 0.011
stem cell division GO:0017145 1 0.011
response to chemical GO:0042221 320 0.011
regulation of skeletal muscle tissue development GO:0048641 4 0.011
nuclear transport GO:0051169 4 0.011
developmental pigmentation GO:0048066 48 0.011
leukocyte differentiation GO:0002521 25 0.011
regulation of nitrogen compound metabolic process GO:0051171 251 0.011
adherens junction organization GO:0034332 4 0.011
organic substance biosynthetic process GO:1901576 289 0.011
positive regulation of nucleotide catabolic process GO:0030813 1 0.011
positive regulation of neuron apoptotic process GO:0043525 1 0.011
regulation of primary metabolic process GO:0080090 311 0.011
cell cycle arrest GO:0007050 1 0.011
single organism organelle organization GO:1902589 199 0.011
negative regulation of macromolecule metabolic process GO:0010605 76 0.011
protein complex localization GO:0031503 1 0.011
b cell activation GO:0042113 2 0.011
erk1 and erk2 cascade GO:0070371 4 0.011
negative regulation of cellular catabolic process GO:0031330 3 0.011
metal ion homeostasis GO:0055065 26 0.011
cellular response to light stimulus GO:0071482 4 0.010
glial cell proliferation GO:0014009 4 0.010
vascular endothelial growth factor signaling pathway GO:0038084 3 0.010
protein complex subunit organization GO:0071822 46 0.010
response to ketone GO:1901654 1 0.010
er nucleus signaling pathway GO:0006984 2 0.010
multi organism process GO:0051704 134 0.010
cellular response to hypoxia GO:0071456 1 0.010
odontogenesis of dentin containing tooth GO:0042475 1 0.010
dna templated transcription elongation GO:0006354 3 0.010
muscle cell differentiation GO:0042692 139 0.010
neural retina development GO:0003407 49 0.010
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.010
negative regulation of multi organism process GO:0043901 3 0.010
direct ossification GO:0036072 3 0.010
mitotic dna damage checkpoint GO:0044773 4 0.010
glomerulus vasculature development GO:0072012 2 0.010
protein targeting to nucleus GO:0044744 3 0.010

cald1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.092
cardiovascular system disease DOID:1287 0 0.048
nervous system disease DOID:863 0 0.023
immune system disease DOID:2914 0 0.015
hematopoietic system disease DOID:74 0 0.015
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
organ system cancer DOID:0050686 0 0.012