Danio rerio

71 known processes

ccdc40

coiled-coil domain containing 40

(Aliases: im:7149866,si:dkey-237i9.5)

ccdc40 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cilium organization GO:0044782 71 0.988
nonmotile primary cilium assembly GO:0035058 2 0.976
cilium morphogenesis GO:0060271 85 0.956
cilium assembly GO:0042384 58 0.910
determination of left right symmetry GO:0007368 179 0.665
cellular component movement GO:0006928 335 0.605
specification of symmetry GO:0009799 204 0.603
epithelial cilium movement GO:0003351 15 0.590
cell projection organization GO:0030030 284 0.542
microtubule based movement GO:0007018 33 0.520
cellular component morphogenesis GO:0032989 336 0.451
organelle organization GO:0006996 227 0.446
axoneme assembly GO:0035082 9 0.436
cellular component biogenesis GO:0044085 178 0.410
determination of heart left right asymmetry GO:0061371 117 0.389
determination of bilateral symmetry GO:0009855 204 0.388
single organism organelle organization GO:1902589 199 0.378
larval development GO:0002164 2 0.364
morphogenesis of an epithelium GO:0002009 333 0.363
intraciliary transport GO:0042073 7 0.356
locomotion GO:0040011 313 0.346
cell projection assembly GO:0030031 64 0.339
cellular component assembly GO:0022607 170 0.324
renal system development GO:0072001 94 0.302
cellular component assembly involved in morphogenesis GO:0010927 107 0.298
heart development GO:0007507 313 0.297
negative regulation of biological process GO:0048519 304 0.276
embryonic heart tube morphogenesis GO:0003143 108 0.266
cilium movement involved in cell motility GO:0060294 3 0.251
kidney development GO:0001822 92 0.230
organelle assembly GO:0070925 110 0.223
embryo development ending in birth or egg hatching GO:0009792 271 0.219
smoothened signaling pathway GO:0007224 30 0.218
chordate embryonic development GO:0043009 271 0.202
heart looping GO:0001947 94 0.201
regulation of response to stimulus GO:0048583 269 0.197
axonemal dynein complex assembly GO:0070286 5 0.182
cell part morphogenesis GO:0032990 246 0.181
cilium movement GO:0003341 26 0.179
dorsal ventral pattern formation GO:0009953 125 0.177
cell morphogenesis GO:0000902 289 0.175
tube morphogenesis GO:0035239 349 0.171
signal transduction GO:0007165 455 0.167
cell projection morphogenesis GO:0048858 244 0.165
epithelial tube morphogenesis GO:0060562 148 0.161
regulation of smoothened signaling pathway GO:0008589 18 0.158
nitrogen compound metabolic process GO:0006807 319 0.150
embryonic heart tube development GO:0035050 133 0.150
embryonic organ development GO:0048568 381 0.143
striated muscle tissue development GO:0014706 110 0.135
response to chemical GO:0042221 320 0.133
regulation of signal transduction GO:0009966 225 0.129
urogenital system development GO:0001655 97 0.128
regionalization GO:0003002 274 0.126
fluid transport GO:0042044 17 0.119
hormone transport GO:0009914 2 0.118
regulation of biological quality GO:0065008 263 0.115
localization of cell GO:0051674 244 0.115
neural tube development GO:0021915 62 0.112
regulation of rna metabolic process GO:0051252 224 0.103
regulation of signaling GO:0023051 235 0.101
cellular nitrogen compound metabolic process GO:0034641 290 0.098
negative regulation of stem cell differentiation GO:2000737 2 0.093
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.092
organic cyclic compound biosynthetic process GO:1901362 223 0.089
cilium dependent cell motility GO:0060285 4 0.088
system process GO:0003008 185 0.084
cell surface receptor signaling pathway GO:0007166 325 0.083
microtubule based process GO:0007017 60 0.082
response to xenobiotic stimulus GO:0009410 45 0.081
cellular aromatic compound metabolic process GO:0006725 295 0.078
organic cyclic compound metabolic process GO:1901360 301 0.076
cellular protein metabolic process GO:0044267 129 0.076
cilium or flagellum dependent cell motility GO:0001539 4 0.075
response to fluid shear stress GO:0034405 2 0.075
epithelial cilium movement involved in determination of left right asymmetry GO:0060287 8 0.075
regulation of biosynthetic process GO:0009889 250 0.072
lipid storage GO:0019915 1 0.069
nucleic acid templated transcription GO:0097659 181 0.068
regulation of developmental process GO:0050793 247 0.067
tube closure GO:0060606 1 0.066
cell proliferation GO:0008283 80 0.065
nephron tubule morphogenesis GO:0072078 1 0.064
microtubule bundle formation GO:0001578 9 0.062
positive regulation of biological process GO:0048518 253 0.061
establishment of localization GO:0051234 244 0.059
regulation of macromolecule biosynthetic process GO:0010556 225 0.058
proximal tubule development GO:0072014 3 0.058
cellular biosynthetic process GO:0044249 286 0.058
gene expression GO:0010467 252 0.058
heterocycle biosynthetic process GO:0018130 215 0.057
brain development GO:0007420 293 0.056
aromatic compound biosynthetic process GO:0019438 217 0.056
aging GO:0007568 2 0.055
regulation of cell communication GO:0010646 232 0.055
biosynthetic process GO:0009058 294 0.055
transcription dna templated GO:0006351 181 0.055
vestibular receptor cell differentiation GO:0060114 3 0.054
meiotic cell cycle process GO:1903046 3 0.054
digestive system development GO:0055123 289 0.052
single organism transport GO:0044765 206 0.052
determination of liver left right asymmetry GO:0071910 11 0.051
nucleobase containing compound metabolic process GO:0006139 274 0.051
motile cilium assembly GO:0044458 4 0.051
regulation of oligodendrocyte differentiation GO:0048713 1 0.050
circulatory system process GO:0003013 87 0.050
taxis GO:0042330 109 0.048
response to light stimulus GO:0009416 46 0.047
positive regulation of cell communication GO:0010647 56 0.047
establishment of endothelial barrier GO:0061028 3 0.046
single organism localization GO:1902578 225 0.046
embryonic organ morphogenesis GO:0048562 274 0.045
heart morphogenesis GO:0003007 156 0.045
cellular nitrogen compound biosynthetic process GO:0044271 218 0.045
germ line stem cell maintenance GO:0030718 2 0.043
regulation of nitrogen compound metabolic process GO:0051171 251 0.042
response to abiotic stimulus GO:0009628 122 0.041
organic substance biosynthetic process GO:1901576 289 0.041
rna biosynthetic process GO:0032774 181 0.040
spermatid differentiation GO:0048515 2 0.040
response to external stimulus GO:0009605 264 0.040
microtubule based transport GO:0010970 10 0.040
neural tube patterning GO:0021532 33 0.039
organelle fission GO:0048285 23 0.039
cytoskeleton dependent intracellular transport GO:0030705 10 0.038
meiotic nuclear division GO:0007126 4 0.038
maintenance of location GO:0051235 4 0.038
spermatid development GO:0007286 2 0.037
regulation of cellular metabolic process GO:0031323 320 0.037
regulation of transcription dna templated GO:0006355 213 0.037
anterior posterior pattern specification GO:0009952 152 0.037
cellular macromolecule biosynthetic process GO:0034645 224 0.037
transcription from rna polymerase ii promoter GO:0006366 80 0.035
transport GO:0006810 220 0.035
kupffer s vesicle development GO:0070121 50 0.035
digestive tract morphogenesis GO:0048546 231 0.035
rna metabolic process GO:0016070 219 0.035
regulation of gene expression GO:0010468 265 0.034
chemotaxis GO:0006935 104 0.034
hormone secretion GO:0046879 2 0.033
determination of left right asymmetry in nervous system GO:0035545 4 0.032
epithelial cell morphogenesis GO:0003382 2 0.032
pronephros morphogenesis GO:0072114 14 0.032
nephron epithelium morphogenesis GO:0072088 1 0.032
gastrulation GO:0007369 208 0.031
regulation of circadian rhythm GO:0042752 4 0.031
regulation of system process GO:0044057 40 0.031
negative regulation of blood vessel endothelial cell migration GO:0043537 1 0.031
oocyte anterior posterior axis specification GO:0007314 4 0.031
homeostatic process GO:0042592 142 0.031
positive regulation of response to stimulus GO:0048584 80 0.030
somatic stem cell maintenance GO:0035019 1 0.030
renal tubule morphogenesis GO:0061333 1 0.030
heart jogging GO:0003146 40 0.029
specification of axis polarity GO:0065001 4 0.028
nitric oxide metabolic process GO:0046209 2 0.028
protein metabolic process GO:0019538 183 0.027
macromolecule biosynthetic process GO:0009059 227 0.027
regulation of stem cell differentiation GO:2000736 4 0.027
cellular response to light stimulus GO:0071482 4 0.027
regulation of rna biosynthetic process GO:2001141 213 0.027
macromolecular complex subunit organization GO:0043933 74 0.027
nucleic acid metabolic process GO:0090304 244 0.027
chromatin modification GO:0016568 21 0.027
cellular macromolecule metabolic process GO:0044260 391 0.027
negative regulation of gene expression GO:0010629 65 0.026
left right pattern formation GO:0060972 19 0.026
regulation of cellular biosynthetic process GO:0031326 245 0.026
cellular localization GO:0051641 97 0.026
spindle assembly GO:0051225 2 0.025
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.025
nucleobase containing compound biosynthetic process GO:0034654 205 0.025
regulation of glial cell differentiation GO:0045685 4 0.025
regulation of macromolecule metabolic process GO:0060255 317 0.025
response to organic substance GO:0010033 153 0.025
regulation of tube size GO:0035150 2 0.024
establishment of protein localization to plasma membrane GO:0090002 1 0.024
small molecule metabolic process GO:0044281 77 0.024
protein modification process GO:0036211 100 0.024
cellular response to radiation GO:0071478 4 0.024
proximal distal pattern formation GO:0009954 1 0.023
cytoskeleton dependent cytokinesis GO:0061640 3 0.023
female meiotic division GO:0007143 2 0.023
regulation of blood vessel size GO:0050880 2 0.023
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.022
positive regulation of multicellular organismal process GO:0051240 52 0.022
neuron differentiation GO:0030182 353 0.022
response to endogenous stimulus GO:0009719 83 0.022
cellular response to xenobiotic stimulus GO:0071466 35 0.021
cell migration GO:0016477 237 0.021
internal peptidyl lysine acetylation GO:0018393 2 0.021
sensory organ morphogenesis GO:0090596 200 0.021
oxoacid metabolic process GO:0043436 31 0.021
nucleocytoplasmic transport GO:0006913 4 0.021
photoreceptor cell development GO:0042461 40 0.021
regulation of cell development GO:0060284 100 0.020
positive regulation of jnk cascade GO:0046330 3 0.020
regulation of cell differentiation GO:0045595 142 0.020
regulation of cell projection assembly GO:0060491 4 0.020
pronephros development GO:0048793 69 0.019
ear development GO:0043583 127 0.019
ribosomal small subunit biogenesis GO:0042274 2 0.019
intracellular signal transduction GO:0035556 85 0.019
regulation of transmembrane transporter activity GO:0022898 2 0.019
regulation of metabolic process GO:0019222 359 0.019
establishment of protein localization to organelle GO:0072594 4 0.019
single organism metabolic process GO:0044710 217 0.018
central nervous system development GO:0007417 387 0.018
positive regulation of signaling GO:0023056 56 0.018
nephric duct development GO:0072176 13 0.018
hepaticobiliary system development GO:0061008 98 0.018
aorta development GO:0035904 4 0.018
tor signaling GO:0031929 7 0.018
circadian rhythm GO:0007623 19 0.018
digestive tract development GO:0048565 265 0.018
negative regulation of cellular process GO:0048523 283 0.018
regulation of nucleic acid templated transcription GO:1903506 213 0.018
positive regulation of cellular process GO:0048522 201 0.017
regulation of cell death GO:0010941 103 0.017
positive regulation of gliogenesis GO:0014015 2 0.017
protein localization to vacuole GO:0072665 1 0.017
cellular protein modification process GO:0006464 100 0.017
blood circulation GO:0008015 87 0.017
positive regulation of signal transduction GO:0009967 56 0.017
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.017
centrosome organization GO:0051297 1 0.017
cellular ketone metabolic process GO:0042180 11 0.017
macromolecular complex assembly GO:0065003 35 0.017
somitogenesis GO:0001756 87 0.017
adult behavior GO:0030534 2 0.017
convergent extension GO:0060026 118 0.016
stem cell maintenance GO:0019827 4 0.016
cellular component disassembly GO:0022411 1 0.016
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.016
head development GO:0060322 303 0.016
inner ear receptor stereocilium organization GO:0060122 8 0.016
regulation of mrna processing GO:0050684 3 0.016
hypochord development GO:0055016 3 0.016
positive regulation of transport GO:0051050 2 0.016
camera type eye development GO:0043010 222 0.016
cellular modified amino acid metabolic process GO:0006575 3 0.016
negative regulation of ras protein signal transduction GO:0046580 1 0.015
organic acid metabolic process GO:0006082 31 0.015
pronephric glomerulus morphogenesis GO:0035775 6 0.015
axon ensheathment GO:0008366 18 0.015
macromolecular complex disassembly GO:0032984 1 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.015
specification of organ axis polarity GO:0010084 2 0.015
heterocycle metabolic process GO:0046483 290 0.015
multicellular organism growth GO:0035264 4 0.015
negative regulation of epithelial cell migration GO:0010633 1 0.015
primary neural tube formation GO:0014020 1 0.015
regulation of establishment of protein localization GO:0070201 4 0.014
regulation of primary metabolic process GO:0080090 311 0.014
cellular response to dsrna GO:0071359 1 0.014
long chain fatty acid metabolic process GO:0001676 1 0.014
nuclear export GO:0051168 1 0.014
negative regulation of cell death GO:0060548 60 0.014
odontogenesis of dentin containing tooth GO:0042475 1 0.014
positive regulation of catabolic process GO:0009896 4 0.014
regulation of intracellular signal transduction GO:1902531 57 0.014
axis specification GO:0009798 43 0.014
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.014
vasculature development GO:0001944 278 0.014
centrosome cycle GO:0007098 1 0.014
body morphogenesis GO:0010171 16 0.014
photoreceptor cell morphogenesis GO:0008594 1 0.014
spinal cord development GO:0021510 46 0.014
positive regulation of cellular amine metabolic process GO:0033240 0 0.014
growth GO:0040007 174 0.013
generation of neurons GO:0048699 385 0.013
immune system process GO:0002376 241 0.013
rna processing GO:0006396 25 0.013
positive regulation of translation GO:0045727 1 0.013
regulation of cell proliferation GO:0042127 37 0.013
detection of abiotic stimulus GO:0009582 24 0.013
rna transport GO:0050658 2 0.013
b cell mediated immunity GO:0019724 3 0.013
type b pancreatic cell development GO:0003323 4 0.013
immunoglobulin mediated immune response GO:0016064 3 0.013
negative regulation of macromolecule metabolic process GO:0010605 76 0.013
regulation of epidermis development GO:0045682 2 0.013
positive regulation of epithelial cell differentiation GO:0030858 2 0.013
lateral line development GO:0048882 66 0.013
muscle tissue development GO:0060537 110 0.013
midbrain hindbrain boundary development GO:0030917 23 0.013
protein k48 linked ubiquitination GO:0070936 1 0.012
cell motility GO:0048870 244 0.012
regulation of collagen metabolic process GO:0010712 2 0.012
homeostasis of number of cells within a tissue GO:0048873 4 0.012
regulation of cell shape GO:0008360 1 0.012
negative regulation of endothelial cell migration GO:0010596 1 0.012
distal tubule development GO:0072017 1 0.012
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.012
cellular response to external stimulus GO:0071496 2 0.012
negative regulation of signal transduction GO:0009968 94 0.012
spindle assembly involved in mitosis GO:0090307 1 0.012
respiratory system development GO:0060541 5 0.012
Mouse
protein complex subunit organization GO:0071822 46 0.012
nephron morphogenesis GO:0072028 2 0.012
microtubule cytoskeleton organization GO:0000226 33 0.012
organonitrogen compound metabolic process GO:1901564 74 0.012
regulation of neuron differentiation GO:0045664 56 0.012
photoreceptor cell differentiation GO:0046530 55 0.012
regulation of membrane potential GO:0042391 23 0.012
nephron tubule epithelial cell differentiation GO:0072160 1 0.012
neuron development GO:0048666 262 0.012
negative regulation of gliogenesis GO:0014014 1 0.012
regulation of intracellular ph GO:0051453 1 0.012
regulation of cellular amine metabolic process GO:0033238 0 0.012
regulation of cell activation GO:0050865 1 0.011
gtp metabolic process GO:0046039 4 0.011
regulation of blood circulation GO:1903522 32 0.011
positive regulation of oligodendrocyte differentiation GO:0048714 1 0.011
cellular response to organic substance GO:0071310 105 0.011
atp catabolic process GO:0006200 4 0.011
regulation of cytokine production GO:0001817 3 0.011
keratinocyte differentiation GO:0030216 0 0.011
vestibular reflex GO:0060005 2 0.011
action potential GO:0001508 19 0.011
regulation of cellular ketone metabolic process GO:0010565 7 0.011
bone morphogenesis GO:0060349 11 0.011
semicircular canal morphogenesis GO:0048752 18 0.011
protein targeting to nucleus GO:0044744 3 0.011
regulation of cellular amino acid metabolic process GO:0006521 0 0.011
nuclear transport GO:0051169 4 0.011
macromolecule modification GO:0043412 111 0.011
nitric oxide biosynthetic process GO:0006809 2 0.011
membrane hyperpolarization GO:0060081 1 0.011
regulation of mrna splicing via spliceosome GO:0048024 3 0.011
female sex differentiation GO:0046660 4 0.011
inner ear development GO:0048839 126 0.011
glucocorticoid metabolic process GO:0008211 2 0.011
negative regulation of rna metabolic process GO:0051253 48 0.011
cellular amino acid metabolic process GO:0006520 7 0.011
cellular response to abiotic stimulus GO:0071214 4 0.011
multicellular organismal signaling GO:0035637 22 0.011
regulation of nervous system development GO:0051960 90 0.011
regulation of dna templated transcription elongation GO:0032784 3 0.011
fertilization GO:0009566 3 0.011
mononuclear cell proliferation GO:0032943 1 0.011
cytoskeleton organization GO:0007010 96 0.010
amine metabolic process GO:0009308 2 0.010
carboxylic acid metabolic process GO:0019752 22 0.010
skin development GO:0043588 54 0.010
palate development GO:0060021 8 0.010
regulation of gtpase activity GO:0043087 2 0.010
nucleobase containing compound transport GO:0015931 2 0.010
programmed cell death GO:0012501 119 0.010
venous endothelial cell migration involved in lymph vessel development GO:0060855 4 0.010
negative regulation of transcription dna templated GO:0045892 45 0.010
regulation of hormone secretion GO:0046883 2 0.010
regulation of transporter activity GO:0032409 2 0.010
auditory receptor cell fate commitment GO:0009912 4 0.010
regulation of muscle contraction GO:0006937 3 0.010
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.010
ribonucleoside monophosphate catabolic process GO:0009158 4 0.010
regulation of sodium ion transport GO:0002028 2 0.010

ccdc40 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.071