Danio rerio

0 known processes

cmn

calymmin

(Aliases: wu:fd07b03)

cmn biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
tissue homeostasis GO:0001894 25 0.628
cartilage development GO:0051216 96 0.498
growth GO:0040007 174 0.342
developmental growth involved in morphogenesis GO:0060560 86 0.301
cellular component movement GO:0006928 335 0.299
growth plate cartilage development GO:0003417 2 0.241
developmental growth GO:0048589 166 0.238
extracellular structure organization GO:0043062 27 0.229
taxis GO:0042330 109 0.213
regulation of biological quality GO:0065008 263 0.209
cellular nitrogen compound metabolic process GO:0034641 290 0.194
nitrogen compound metabolic process GO:0006807 319 0.194
cartilage development involved in endochondral bone morphogenesis GO:0060351 8 0.194
endochondral bone morphogenesis GO:0060350 8 0.187
connective tissue development GO:0061448 99 0.176
ameboidal type cell migration GO:0001667 143 0.170
embryonic organ morphogenesis GO:0048562 274 0.165
cellular nitrogen compound biosynthetic process GO:0044271 218 0.165
anatomical structure homeostasis GO:0060249 36 0.139
gene expression GO:0010467 252 0.134
regulation of nitrogen compound metabolic process GO:0051171 251 0.127
sensory organ morphogenesis GO:0090596 200 0.122
rna metabolic process GO:0016070 219 0.122
embryonic organ development GO:0048568 381 0.120
negative regulation of biological process GO:0048519 304 0.119
aromatic compound biosynthetic process GO:0019438 217 0.115
regulation of cellular metabolic process GO:0031323 320 0.113
photoreceptor cell fate commitment GO:0046552 1 0.110
nucleic acid templated transcription GO:0097659 181 0.109
basement membrane assembly GO:0070831 3 0.109
organic cyclic compound biosynthetic process GO:1901362 223 0.109
regulation of biosynthetic process GO:0009889 250 0.107
organic cyclic compound metabolic process GO:1901360 301 0.107
endochondral bone growth GO:0003416 2 0.099
cellular component morphogenesis GO:0032989 336 0.099
skeletal system development GO:0001501 181 0.097
morphogenesis of an epithelium GO:0002009 333 0.096
aging GO:0007568 2 0.094
response to external stimulus GO:0009605 264 0.094
female sex differentiation GO:0046660 4 0.093
stem cell proliferation GO:0072089 4 0.093
biosynthetic process GO:0009058 294 0.092
head development GO:0060322 303 0.089
transcription dna templated GO:0006351 181 0.089
organic substance biosynthetic process GO:1901576 289 0.083
regulation of rna biosynthetic process GO:2001141 213 0.082
multicellular organismal homeostasis GO:0048871 29 0.080
system process GO:0003008 185 0.080
developmental cell growth GO:0048588 52 0.079
regulation of transcription dna templated GO:0006355 213 0.077
single organism transport GO:0044765 206 0.076
single organism metabolic process GO:0044710 217 0.074
nucleobase containing compound biosynthetic process GO:0034654 205 0.072
brain development GO:0007420 293 0.071
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.068
striated muscle cell differentiation GO:0051146 129 0.067
axonogenesis GO:0007409 152 0.067
cell morphogenesis GO:0000902 289 0.065
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.065
locomotion GO:0040011 313 0.065
striated muscle cell development GO:0055002 108 0.064
heterocycle biosynthetic process GO:0018130 215 0.064
cell migration GO:0016477 237 0.061
cellular biosynthetic process GO:0044249 286 0.059
heterocycle metabolic process GO:0046483 290 0.058
localization of cell GO:0051674 244 0.058
nucleic acid metabolic process GO:0090304 244 0.057
regulation of metabolic process GO:0019222 359 0.057
cellular aromatic compound metabolic process GO:0006725 295 0.057
macromolecule biosynthetic process GO:0009059 227 0.056
neuron projection extension GO:1990138 45 0.056
maintenance of location GO:0051235 4 0.056
regulation of cell shape GO:0008360 1 0.056
cellular macromolecule biosynthetic process GO:0034645 224 0.055
organ growth GO:0035265 12 0.054
response to chemical GO:0042221 320 0.052
nucleobase containing compound metabolic process GO:0006139 274 0.051
muscle cell differentiation GO:0042692 139 0.050
diencephalon development GO:0021536 58 0.049
sensory organ development GO:0007423 393 0.049
regulation of rna metabolic process GO:0051252 224 0.049
cellular response to external stimulus GO:0071496 2 0.049
positive regulation of catabolic process GO:0009896 4 0.048
convergent extension GO:0060026 118 0.048
multicellular organism growth GO:0035264 4 0.047
cell motility GO:0048870 244 0.047
regulation of cellular biosynthetic process GO:0031326 245 0.047
extracellular matrix organization GO:0030198 27 0.045
cellular macromolecule metabolic process GO:0044260 391 0.045
notochord development GO:0030903 54 0.045
regulation of protein targeting GO:1903533 2 0.044
synaptic transmission cholinergic GO:0007271 4 0.044
muscle structure development GO:0061061 196 0.044
skeletal muscle organ development GO:0060538 78 0.043
forebrain development GO:0030900 96 0.042
larval development GO:0002164 2 0.042
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.041
homeostatic process GO:0042592 142 0.041
adult behavior GO:0030534 2 0.041
cellular ketone metabolic process GO:0042180 11 0.041
small molecule metabolic process GO:0044281 77 0.041
bone morphogenesis GO:0060349 11 0.041
axon guidance GO:0007411 86 0.041
peptidyl serine modification GO:0018209 2 0.041
notochord morphogenesis GO:0048570 17 0.040
regulation of primary metabolic process GO:0080090 311 0.039
somatic muscle development GO:0007525 4 0.039
carboxylic acid catabolic process GO:0046395 3 0.039
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.039
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.038
pharyngeal muscle development GO:0043282 4 0.038
rna biosynthetic process GO:0032774 181 0.037
specification of axis polarity GO:0065001 4 0.037
single organism organelle organization GO:1902589 199 0.037
positive regulation of cellular amine metabolic process GO:0033240 0 0.037
striated muscle tissue development GO:0014706 110 0.037
establishment of localization GO:0051234 244 0.037
mesenchymal cell proliferation GO:0010463 1 0.036
skeletal system morphogenesis GO:0048705 102 0.036
regulation of nucleoside metabolic process GO:0009118 2 0.036
regulation of nucleic acid templated transcription GO:1903506 213 0.035
negative regulation of gene expression GO:0010629 65 0.034
cellular response to organic substance GO:0071310 105 0.034
ear development GO:0043583 127 0.034
glial cell fate specification GO:0021780 4 0.033
cell substrate adhesion GO:0031589 4 0.033
cell part morphogenesis GO:0032990 246 0.033
transcription from rna polymerase ii promoter GO:0006366 80 0.033
cellular amine metabolic process GO:0044106 2 0.033
cellular response to chemical stimulus GO:0070887 157 0.033
cellular modified amino acid metabolic process GO:0006575 3 0.033
anterior posterior pattern specification GO:0009952 152 0.033
organic acid catabolic process GO:0016054 3 0.033
positive regulation of cellular metabolic process GO:0031325 94 0.032
regulation of protein import into nucleus GO:0042306 2 0.032
regulation of anatomical structure morphogenesis GO:0022603 130 0.032
negative regulation of cellular process GO:0048523 283 0.032
regulation of molecular function GO:0065009 70 0.032
generation of neurons GO:0048699 385 0.031
regulation of multicellular organism growth GO:0040014 4 0.031
regulation of cell morphogenesis GO:0022604 42 0.031
determination of heart left right asymmetry GO:0061371 117 0.031
guanosine containing compound metabolic process GO:1901068 4 0.031
gtp catabolic process GO:0006184 2 0.031
protein import into nucleus GO:0006606 3 0.031
regulation of axonogenesis GO:0050770 32 0.030
regulation of protein localization to nucleus GO:1900180 2 0.030
heart looping GO:0001947 94 0.030
bone development GO:0060348 14 0.030
cell projection morphogenesis GO:0048858 244 0.030
carboxylic acid metabolic process GO:0019752 22 0.030
gastrulation with mouth forming second GO:0001702 44 0.030
cellular component biogenesis GO:0044085 178 0.030
gtp metabolic process GO:0046039 4 0.030
cellular amino acid metabolic process GO:0006520 7 0.030
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.029
purine nucleoside monophosphate catabolic process GO:0009128 4 0.029
tissue remodeling GO:0048771 4 0.029
positive regulation of cellular catabolic process GO:0031331 3 0.029
organic acid metabolic process GO:0006082 31 0.028
inner ear development GO:0048839 126 0.028
chordate embryonic development GO:0043009 271 0.028
cardiac cell fate commitment GO:0060911 1 0.028
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.028
regulation of macromolecule metabolic process GO:0060255 317 0.028
positive regulation of cell adhesion GO:0045785 1 0.028
cell migration involved in gastrulation GO:0042074 79 0.028
muscle organ development GO:0007517 101 0.028
cell surface receptor signaling pathway GO:0007166 325 0.028
regulation of cell morphogenesis involved in differentiation GO:0010769 38 0.027
guanosine containing compound catabolic process GO:1901069 2 0.027
multi organism process GO:0051704 134 0.027
secondary metabolic process GO:0019748 3 0.027
regulation of cellular ketone metabolic process GO:0010565 7 0.027
axon development GO:0061564 166 0.026
regulation of dendrite development GO:0050773 3 0.026
protein targeting to nucleus GO:0044744 3 0.026
regulation of cellular amino acid metabolic process GO:0006521 0 0.026
protein localization to nucleus GO:0034504 3 0.026
macromolecular complex subunit organization GO:0043933 74 0.026
neuron projection guidance GO:0097485 86 0.026
neuron development GO:0048666 262 0.026
neuron projection morphogenesis GO:0048812 161 0.026
lipid catabolic process GO:0016042 4 0.026
embryonic skeletal system morphogenesis GO:0048704 93 0.026
regulation of nucleocytoplasmic transport GO:0046822 2 0.026
cellular component assembly GO:0022607 170 0.025
response to organic substance GO:0010033 153 0.025
single organism nuclear import GO:1902593 3 0.025
immune system process GO:0002376 241 0.025
stem cell differentiation GO:0048863 117 0.025
regionalization GO:0003002 274 0.025
segmentation GO:0035282 97 0.025
negative regulation of metabolic process GO:0009892 86 0.024
determination of left right symmetry GO:0007368 179 0.024
regulation of tube size GO:0035150 2 0.024
regulation of gene expression GO:0010468 265 0.024
leukocyte proliferation GO:0070661 1 0.024
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.024
response to hexose GO:0009746 3 0.024
spinal cord motor neuron differentiation GO:0021522 26 0.024
positive regulation of metabolic process GO:0009893 108 0.023
urogenital system development GO:0001655 97 0.023
lipid storage GO:0019915 1 0.023
membrane repolarization GO:0086009 2 0.023
organonitrogen compound metabolic process GO:1901564 74 0.023
cation transport GO:0006812 81 0.022
nucleocytoplasmic transport GO:0006913 4 0.022
primary neural tube formation GO:0014020 1 0.022
small molecule catabolic process GO:0044282 3 0.021
apoptotic process involved in morphogenesis GO:0060561 2 0.021
regulation of nucleotide catabolic process GO:0030811 2 0.021
epithelial cell morphogenesis GO:0003382 2 0.021
alpha amino acid metabolic process GO:1901605 3 0.021
regulation of cell substrate adhesion GO:0010810 1 0.021
regulation of macromolecule biosynthetic process GO:0010556 225 0.021
positive regulation of nucleic acid templated transcription GO:1903508 57 0.021
regulation of blood circulation GO:1903522 32 0.021
anterior commissure morphogenesis GO:0021960 3 0.021
negative regulation of protein phosphorylation GO:0001933 4 0.020
nephron development GO:0072006 31 0.020
camera type eye morphogenesis GO:0048593 108 0.020
positive regulation of nucleotide catabolic process GO:0030813 1 0.020
protein import GO:0017038 3 0.020
oxoacid metabolic process GO:0043436 31 0.020
negative regulation of cell communication GO:0010648 96 0.020
central nervous system development GO:0007417 387 0.020
cytoskeleton organization GO:0007010 96 0.020
embryonic heart tube morphogenesis GO:0003143 108 0.020
protein heterooligomerization GO:0051291 1 0.020
regulation of blood pressure GO:0008217 1 0.020
regulation of reproductive process GO:2000241 4 0.019
regulation of ion transmembrane transporter activity GO:0032412 2 0.019
regulation of intracellular protein transport GO:0033157 3 0.019
camera type eye photoreceptor cell differentiation GO:0060219 19 0.019
response to carbohydrate GO:0009743 3 0.019
melanin metabolic process GO:0006582 2 0.019
negative regulation of feeding behavior GO:2000252 2 0.019
dorsal ventral pattern formation GO:0009953 125 0.019
vasculature development GO:0001944 278 0.019
oligodendrocyte cell fate specification GO:0021778 4 0.019
establishment of protein localization to organelle GO:0072594 4 0.019
kidney development GO:0001822 92 0.018
amine metabolic process GO:0009308 2 0.018
pronephros development GO:0048793 69 0.018
myotube cell development GO:0014904 35 0.018
blood vessel morphogenesis GO:0048514 216 0.018
phenol containing compound biosynthetic process GO:0046189 4 0.018
ribonucleoside monophosphate catabolic process GO:0009158 4 0.018
cellular response to growth factor stimulus GO:0071363 39 0.018
neural crest cell migration GO:0001755 42 0.018
muscle cell development GO:0055001 115 0.018
regulation of cellular amine metabolic process GO:0033238 0 0.018
response to alkaloid GO:0043279 2 0.018
hematopoietic or lymphoid organ development GO:0048534 191 0.018
lipid oxidation GO:0034440 1 0.018
wnt signaling pathway GO:0016055 80 0.018
phagocytosis GO:0006909 3 0.018
transport GO:0006810 220 0.018
embryonic heart tube development GO:0035050 133 0.018
negative regulation of nuclear division GO:0051784 3 0.018
positive regulation of gtp catabolic process GO:0033126 1 0.018
muscle fiber development GO:0048747 52 0.017
regulation of neuron projection development GO:0010975 40 0.017
cellular response to extracellular stimulus GO:0031668 2 0.017
embryonic skeletal joint development GO:0072498 3 0.017
cell growth GO:0016049 57 0.017
positive regulation of cellular component biogenesis GO:0044089 3 0.017
apoptotic process involved in development GO:1902742 2 0.017
pancreatic a cell development GO:0003322 2 0.017
cellular response to nutrient levels GO:0031669 2 0.017
axon extension GO:0048675 45 0.017
cell proliferation involved in heart morphogenesis GO:0061323 2 0.016
regulation of transporter activity GO:0032409 2 0.016
motor neuron migration GO:0097475 4 0.016
heart development GO:0007507 313 0.016
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.016
chondrocyte development GO:0002063 4 0.016
heart morphogenesis GO:0003007 156 0.016
regulation of cell projection organization GO:0031344 44 0.016
axial mesodermal cell fate specification GO:0048327 3 0.016
epithelial tube morphogenesis GO:0060562 148 0.016
regulation of axon extension GO:0030516 24 0.016
spinal cord development GO:0021510 46 0.016
regulation of gtp catabolic process GO:0033124 2 0.016
cilium morphogenesis GO:0060271 85 0.016
central nervous system neuron differentiation GO:0021953 74 0.016
muscle tissue development GO:0060537 110 0.016
ventral spinal cord development GO:0021517 35 0.016
gas transport GO:0015669 3 0.016
regulation of transmembrane transporter activity GO:0022898 2 0.015
cell morphogenesis involved in differentiation GO:0000904 195 0.015
cell matrix adhesion GO:0007160 4 0.015
retina development in camera type eye GO:0060041 146 0.015
eye development GO:0001654 277 0.015
positive regulation of rna metabolic process GO:0051254 59 0.015
regulation of developmental growth GO:0048638 38 0.015
regulation of multicellular organismal process GO:0051239 277 0.015
midbrain development GO:0030901 28 0.015
neuron differentiation GO:0030182 353 0.015
photoreceptor cell fate specification GO:0043704 1 0.015
protein acetylation GO:0006473 2 0.015
cardiocyte differentiation GO:0035051 44 0.014
neurological system process GO:0050877 62 0.014
ubiquitin dependent protein catabolic process GO:0006511 3 0.014
phosphorus metabolic process GO:0006793 109 0.014
chemotaxis GO:0006935 104 0.014
specification of organ axis polarity GO:0010084 2 0.014
response to stress GO:0006950 263 0.014
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.014
determination of bilateral symmetry GO:0009855 204 0.014
actin filament based process GO:0030029 64 0.014
developmental programmed cell death GO:0010623 4 0.014
growth plate cartilage morphogenesis GO:0003422 1 0.014
phosphate containing compound metabolic process GO:0006796 108 0.014
positive regulation of epithelial cell proliferation GO:0050679 1 0.014
regulation of binding GO:0051098 3 0.014
central nervous system neuron axonogenesis GO:0021955 18 0.014
regulation of purine nucleotide catabolic process GO:0033121 2 0.014
regulation of locomotion GO:0040012 55 0.014
embryonic eye morphogenesis GO:0048048 30 0.013
actin cytoskeleton organization GO:0030036 63 0.013
cellular response to fibroblast growth factor stimulus GO:0044344 22 0.013
cellular response to starvation GO:0009267 1 0.013
mitotic cell cycle process GO:1903047 48 0.013
fertilization GO:0009566 3 0.013
embryonic digestive tract morphogenesis GO:0048557 3 0.013
regulation of bmp signaling pathway involved in heart jogging GO:2000223 12 0.013
cellular protein catabolic process GO:0044257 4 0.013
modification dependent protein catabolic process GO:0019941 3 0.013
fatty acid beta oxidation GO:0006635 1 0.013
negative regulation of cell fate commitment GO:0010454 13 0.013
compound eye development GO:0048749 2 0.013
bone remodeling GO:0046849 2 0.013
collagen metabolic process GO:0032963 2 0.013
semicircular canal development GO:0060872 24 0.013
fluid transport GO:0042044 17 0.013
protein acylation GO:0043543 3 0.013
regulation of cell growth GO:0001558 29 0.013
cation transmembrane transport GO:0098655 65 0.013
wound healing GO:0042060 90 0.013
positive regulation of cell cycle GO:0045787 3 0.013
protein homooligomerization GO:0051260 3 0.013
negative regulation of stem cell differentiation GO:2000737 2 0.013
regulation of protein transport GO:0051223 3 0.013
inorganic anion transport GO:0015698 25 0.013
inner ear morphogenesis GO:0042472 63 0.013
nuclear transport GO:0051169 4 0.013
regulation of establishment of protein localization GO:0070201 4 0.013
positive regulation of biological process GO:0048518 253 0.013
atp catabolic process GO:0006200 4 0.013
reactive nitrogen species metabolic process GO:2001057 0 0.013
cellular catabolic process GO:0044248 27 0.013
regulation of anatomical structure size GO:0090066 33 0.013
cell projection organization GO:0030030 284 0.013
tissue regeneration GO:0042246 74 0.012
response to uv GO:0009411 3 0.012
oocyte maturation GO:0001556 4 0.012
regulation of cell size GO:0008361 29 0.012
cell fate specification GO:0001708 68 0.012
positive regulation of cytoskeleton organization GO:0051495 3 0.012
regulation of developmental process GO:0050793 247 0.012
positive regulation of transport GO:0051050 2 0.012
rostrocaudal neural tube patterning GO:0021903 29 0.012
regulation of cellular component size GO:0032535 30 0.012
specification of symmetry GO:0009799 204 0.012
regulation of erk1 and erk2 cascade GO:0070372 4 0.012
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.012
somitogenesis GO:0001756 87 0.012
response to growth factor GO:0070848 39 0.012
central nervous system projection neuron axonogenesis GO:0021952 15 0.012
central nervous system myelin formation GO:0032289 1 0.012
rhombomere 6 development GO:0021572 4 0.012
regulation of cellular component movement GO:0051270 55 0.012
regulation of metal ion transport GO:0010959 4 0.012
long chain fatty acid biosynthetic process GO:0042759 1 0.012
positive regulation of nucleoside metabolic process GO:0045979 1 0.012
estrogen metabolic process GO:0008210 2 0.012
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 42 0.012
morphogenesis of a branching epithelium GO:0061138 16 0.012
nuclear import GO:0051170 3 0.012
regulation of heart morphogenesis GO:2000826 17 0.012
glomerulus development GO:0032835 27 0.012
regulation of localization GO:0032879 104 0.012
epidermal cell fate specification GO:0009957 4 0.012
multicellular organismal metabolic process GO:0044236 2 0.011
myeloid cell differentiation GO:0030099 86 0.011
somite development GO:0061053 96 0.011
regulation of gtpase activity GO:0043087 2 0.011
regulation of cytoplasmic transport GO:1903649 4 0.011
regulation of cellular component organization GO:0051128 86 0.011
morphogenesis of an epithelial sheet GO:0002011 49 0.011
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.011
neural tube patterning GO:0021532 33 0.011
negative regulation of catabolic process GO:0009895 3 0.011
positive regulation of cellular carbohydrate metabolic process GO:0010676 1 0.011
positive regulation of signal transduction GO:0009967 56 0.011
regulation of autophagy GO:0010506 3 0.011
protein complex subunit organization GO:0071822 46 0.011
basement membrane organization GO:0071711 5 0.011
cell cell signaling GO:0007267 52 0.011
regulation of extent of cell growth GO:0061387 29 0.011
fatty acid catabolic process GO:0009062 1 0.011
embryonic viscerocranium morphogenesis GO:0048703 52 0.011
floor plate development GO:0033504 15 0.011
regulation of neural precursor cell proliferation GO:2000177 3 0.011
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.011
negative regulation of leukocyte differentiation GO:1902106 1 0.011
regulation of protein ubiquitination GO:0031396 3 0.011
regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090092 50 0.011
cellular component assembly involved in morphogenesis GO:0010927 107 0.011
cardiac chamber formation GO:0003207 4 0.010
regulation of sodium ion transport GO:0002028 2 0.010
regulation of signal transduction GO:0009966 225 0.010
immune system development GO:0002520 191 0.010
camera type eye development GO:0043010 222 0.010
macromolecular complex assembly GO:0065003 35 0.010
positive regulation of transcription dna templated GO:0045893 57 0.010
organelle organization GO:0006996 227 0.010
regulation of epithelial cell proliferation GO:0050678 3 0.010
internal protein amino acid acetylation GO:0006475 2 0.010
response to monosaccharide GO:0034284 3 0.010
motor neuron axon guidance GO:0008045 23 0.010
response to glucose GO:0009749 3 0.010
regulation of dendrite morphogenesis GO:0048814 3 0.010
mitotic cell cycle GO:0000278 64 0.010
peptidyl serine phosphorylation GO:0018105 1 0.010
regulation of endothelial cell proliferation GO:0001936 1 0.010
lymphocyte proliferation GO:0046651 1 0.010
regulation of ph GO:0006885 3 0.010
regulation of system process GO:0044057 40 0.010
catecholamine biosynthetic process GO:0042423 2 0.010

cmn disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.168
bone disease DOID:0080001 0 0.064
musculoskeletal system disease DOID:17 0 0.064
connective tissue disease DOID:65 0 0.064
disease of cellular proliferation DOID:14566 0 0.016
cancer DOID:162 0 0.012
organ system cancer DOID:0050686 0 0.011