Danio rerio

38 known processes

cpsf1

cleavage and polyadenylation specific factor 1

(Aliases: wu:fb24c01)

cpsf1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
chordate embryonic development GO:0043009 271 0.664
hematopoietic or lymphoid organ development GO:0048534 191 0.626
embryonic organ development GO:0048568 381 0.524
embryo development ending in birth or egg hatching GO:0009792 271 0.519
Worm
cellular macromolecule metabolic process GO:0044260 391 0.456
embryonic organ morphogenesis GO:0048562 274 0.421
biosynthetic process GO:0009058 294 0.414
Yeast
neuron differentiation GO:0030182 353 0.383
pore complex assembly GO:0046931 2 0.360
protein metabolic process GO:0019538 183 0.344
heterocycle biosynthetic process GO:0018130 215 0.327
Yeast
programmed cell death GO:0012501 119 0.317
aromatic compound biosynthetic process GO:0019438 217 0.277
Yeast
gene expression GO:0010467 252 0.270
larval development GO:0002164 2 0.265
Worm
organic substance biosynthetic process GO:1901576 289 0.258
Yeast
nucleic acid metabolic process GO:0090304 244 0.240
nucleobase containing compound biosynthetic process GO:0034654 205 0.220
Yeast
muscle structure development GO:0061061 196 0.215
eye development GO:0001654 277 0.213
cell part morphogenesis GO:0032990 246 0.212
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.207
apoptotic process GO:0006915 116 0.195
digestive system development GO:0055123 289 0.195
nitrogen compound metabolic process GO:0006807 319 0.192
homeostatic process GO:0042592 142 0.186
response to chemical GO:0042221 320 0.182
tube morphogenesis GO:0035239 349 0.180
regulation of rna biosynthetic process GO:2001141 213 0.173
negative regulation of biological process GO:0048519 304 0.170
Worm
chemotaxis GO:0006935 104 0.167
camera type eye development GO:0043010 222 0.163
cell death GO:0008219 121 0.162
death GO:0016265 121 0.157
maintenance of location GO:0051235 4 0.147
heterocycle metabolic process GO:0046483 290 0.143
cellular biosynthetic process GO:0044249 286 0.143
Yeast
rna biosynthetic process GO:0032774 181 0.141
Yeast
digestive tract development GO:0048565 265 0.139
neuron development GO:0048666 262 0.138
organelle organization GO:0006996 227 0.138
establishment of protein localization to organelle GO:0072594 4 0.133
hemopoiesis GO:0030097 183 0.132
organic cyclic compound metabolic process GO:1901360 301 0.125
immune system development GO:0002520 191 0.125
regulation of nucleic acid templated transcription GO:1903506 213 0.124
cellular nitrogen compound metabolic process GO:0034641 290 0.124
meiotic nuclear division GO:0007126 4 0.123
multicellular organism growth GO:0035264 4 0.122
Worm
cellular macromolecule biosynthetic process GO:0034645 224 0.122
Yeast
protein complex assembly GO:0006461 30 0.120
heart development GO:0007507 313 0.116
embryonic heart tube morphogenesis GO:0003143 108 0.114
locomotion GO:0040011 313 0.106
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.102
regulation of biological quality GO:0065008 263 0.102
regulation of apoptotic process GO:0042981 98 0.102
cellular aromatic compound metabolic process GO:0006725 295 0.101
cellular component movement GO:0006928 335 0.098
meiotic chromosome segregation GO:0045132 3 0.097
muscle tissue development GO:0060537 110 0.093
sensory organ development GO:0007423 393 0.087
transcription dna templated GO:0006351 181 0.085
Yeast
response to organic substance GO:0010033 153 0.085
transport GO:0006810 220 0.084
heart morphogenesis GO:0003007 156 0.081
localization of cell GO:0051674 244 0.078
regulation of protein binding GO:0043393 3 0.078
determination of heart left right asymmetry GO:0061371 117 0.078
establishment of localization GO:0051234 244 0.076
developmental growth GO:0048589 166 0.072
Worm
amine metabolic process GO:0009308 2 0.071
nuclear pore organization GO:0006999 2 0.070
cell surface receptor signaling pathway GO:0007166 325 0.069
reproduction GO:0000003 40 0.067
Worm
determination of bilateral symmetry GO:0009855 204 0.066
cellular amine metabolic process GO:0044106 2 0.066
spindle assembly involved in mitosis GO:0090307 1 0.066
regionalization GO:0003002 274 0.065
cellular component morphogenesis GO:0032989 336 0.064
embryonic skeletal system morphogenesis GO:0048704 93 0.064
cell projection organization GO:0030030 284 0.063
skeletal muscle tissue development GO:0007519 67 0.063
cell migration GO:0016477 237 0.062
generation of neurons GO:0048699 385 0.062
cellular component biogenesis GO:0044085 178 0.061
muscle organ development GO:0007517 101 0.061
regulation of cellular amine metabolic process GO:0033238 0 0.060
macromolecular complex subunit organization GO:0043933 74 0.060
neuron projection development GO:0031175 180 0.060
taxis GO:0042330 109 0.059
organonitrogen compound metabolic process GO:1901564 74 0.058
aging GO:0007568 2 0.058
cell morphogenesis GO:0000902 289 0.058
single organism metabolic process GO:0044710 217 0.058
lipid storage GO:0019915 1 0.058
macromolecule biosynthetic process GO:0009059 227 0.057
Yeast
regulation of primary metabolic process GO:0080090 311 0.057
regulation of organelle organization GO:0033043 29 0.056
cell morphogenesis involved in differentiation GO:0000904 195 0.056
regulation of cellular metabolic process GO:0031323 320 0.053
retina development in camera type eye GO:0060041 146 0.053
oxoacid metabolic process GO:0043436 31 0.052
translational initiation GO:0006413 3 0.052
meiosis i GO:0007127 1 0.051
regulation of transcription dna templated GO:0006355 213 0.051
cell projection morphogenesis GO:0048858 244 0.050
embryonic cranial skeleton morphogenesis GO:0048701 90 0.050
negative regulation of cellular process GO:0048523 283 0.050
nucleic acid templated transcription GO:0097659 181 0.049
Yeast
protein targeting to nucleus GO:0044744 3 0.049
cell proliferation GO:0008283 80 0.047
protein modification process GO:0036211 100 0.047
nucleobase containing compound metabolic process GO:0006139 274 0.046
skeletal muscle organ development GO:0060538 78 0.045
morphogenesis of an epithelium GO:0002009 333 0.045
negative regulation of apoptotic process GO:0043066 55 0.044
signal transduction GO:0007165 455 0.043
macromolecular complex assembly GO:0065003 35 0.043
cellular protein metabolic process GO:0044267 129 0.043
heart looping GO:0001947 94 0.041
skeletal system development GO:0001501 181 0.041
regulation of cellular amino acid metabolic process GO:0006521 0 0.041
cell cycle GO:0007049 93 0.040
small molecule metabolic process GO:0044281 77 0.039
nucleoside monophosphate catabolic process GO:0009125 4 0.039
embryonic viscerocranium morphogenesis GO:0048703 52 0.039
rna metabolic process GO:0016070 219 0.039
regulation of cell death GO:0010941 103 0.038
negative regulation of cellular metabolic process GO:0031324 77 0.038
regulation of programmed cell death GO:0043067 101 0.038
camera type eye morphogenesis GO:0048593 108 0.036
organic acid metabolic process GO:0006082 31 0.036
axon guidance GO:0007411 86 0.036
regulation of macromolecule metabolic process GO:0060255 317 0.035
convergent extension involved in gastrulation GO:0060027 71 0.035
spindle assembly GO:0051225 2 0.034
nuclear import GO:0051170 3 0.034
cellular amino acid metabolic process GO:0006520 7 0.033
chromatin modification GO:0016568 21 0.033
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.033
regulation of macromolecule biosynthetic process GO:0010556 225 0.032
regulation of multicellular organism growth GO:0040014 4 0.032
Worm
cellular nitrogen compound biosynthetic process GO:0044271 218 0.031
Yeast
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.031
cellular response to chemical stimulus GO:0070887 157 0.030
embryonic skeletal system development GO:0048706 97 0.030
negative regulation of metabolic process GO:0009892 86 0.030
nuclear pore complex assembly GO:0051292 2 0.029
hatching GO:0035188 4 0.029
response to abiotic stimulus GO:0009628 122 0.029
regulation of developmental process GO:0050793 247 0.029
Worm
regulation of cellular ketone metabolic process GO:0010565 7 0.028
determination of left right symmetry GO:0007368 179 0.028
meiotic cell cycle process GO:1903046 3 0.028
system process GO:0003008 185 0.028
regulation of meiotic cell cycle GO:0051445 1 0.027
regulation of signal transduction GO:0009966 225 0.027
regulation of cell cycle GO:0051726 52 0.027
regulation of cell differentiation GO:0045595 142 0.027
specification of symmetry GO:0009799 204 0.026
heparan sulfate proteoglycan metabolic process GO:0030201 6 0.026
striated muscle tissue development GO:0014706 110 0.026
macromolecule modification GO:0043412 111 0.026
cellular component assembly GO:0022607 170 0.025
interspecies interaction between organisms GO:0044419 4 0.025
mitotic dna integrity checkpoint GO:0044774 4 0.025
embryonic digestive tract morphogenesis GO:0048557 3 0.025
protein import into nucleus GO:0006606 3 0.025
single organism localization GO:1902578 225 0.025
nucleobase containing compound transport GO:0015931 2 0.025
regulation of establishment of protein localization GO:0070201 4 0.024
reciprocal meiotic recombination GO:0007131 1 0.024
regulation of gene expression GO:0010468 265 0.024
cell motility GO:0048870 244 0.024
regulation of signaling GO:0023051 235 0.024
organelle assembly GO:0070925 110 0.023
negative regulation of macromolecule metabolic process GO:0010605 76 0.023
pancreas development GO:0031016 84 0.023
single organism transport GO:0044765 206 0.023
response to stress GO:0006950 263 0.023
cellular ketone metabolic process GO:0042180 11 0.023
pigmentation GO:0043473 85 0.022
chromosome organization GO:0051276 31 0.022
regulation of cytoplasmic transport GO:1903649 4 0.022
regulation of biosynthetic process GO:0009889 250 0.022
epithelial tube morphogenesis GO:0060562 148 0.022
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.022
regulation of rna metabolic process GO:0051252 224 0.022
sympathetic nervous system development GO:0048485 3 0.022
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.021
positive regulation of transport GO:0051050 2 0.021
cellular protein catabolic process GO:0044257 4 0.021
cellular protein modification process GO:0006464 100 0.021
single organism organelle organization GO:1902589 199 0.021
cellular macromolecular complex assembly GO:0034622 24 0.021
purine nucleoside monophosphate catabolic process GO:0009128 4 0.021
negative regulation of cell cycle phase transition GO:1901988 5 0.021
growth GO:0040007 174 0.021
Worm
retina morphogenesis in camera type eye GO:0060042 79 0.021
transmembrane transport GO:0055085 120 0.021
nuclear transport GO:0051169 4 0.020
protein import GO:0017038 3 0.020
negative regulation of cell death GO:0060548 60 0.020
vasculature development GO:0001944 278 0.020
mitotic g2 dna damage checkpoint GO:0007095 3 0.020
negative regulation of protein phosphorylation GO:0001933 4 0.020
regulation of cellular component organization GO:0051128 86 0.020
atp catabolic process GO:0006200 4 0.020
protein localization to nucleus GO:0034504 3 0.020
nucleic acid transport GO:0050657 2 0.020
sensory organ morphogenesis GO:0090596 200 0.020
immune system process GO:0002376 241 0.020
organism emergence from protective structure GO:0071684 4 0.020
regulation of metabolic process GO:0019222 359 0.019
response to transition metal nanoparticle GO:1990267 28 0.019
digestive tract morphogenesis GO:0048546 231 0.019
reciprocal dna recombination GO:0035825 1 0.019
positive regulation of biosynthetic process GO:0009891 68 0.019
neuron projection guidance GO:0097485 86 0.019
regulation of cellular biosynthetic process GO:0031326 245 0.019
activation of mapkkk activity GO:0000185 1 0.018
response to organic cyclic compound GO:0014070 51 0.018
embryonic digestive tract development GO:0048566 4 0.018
organic cyclic compound biosynthetic process GO:1901362 223 0.018
Yeast
axon development GO:0061564 166 0.018
regulation of nitrogen compound metabolic process GO:0051171 251 0.018
intracellular signal transduction GO:0035556 85 0.018
angiogenesis GO:0001525 158 0.018
negative regulation of gene expression GO:0010629 65 0.017
cellular response to organic cyclic compound GO:0071407 38 0.017
circulatory system process GO:0003013 87 0.017
rna localization GO:0006403 4 0.017
enzyme linked receptor protein signaling pathway GO:0007167 106 0.017
connective tissue development GO:0061448 99 0.016
negative regulation of ras protein signal transduction GO:0046580 1 0.016
carbohydrate biosynthetic process GO:0016051 1 0.016
multi organism process GO:0051704 134 0.016
positive regulation of chromatin modification GO:1903310 1 0.016
regulation of multicellular organismal process GO:0051239 277 0.016
Worm
negative regulation of biosynthetic process GO:0009890 55 0.016
positive regulation of cellular component biogenesis GO:0044089 3 0.016
response to endogenous stimulus GO:0009719 83 0.015
cytoskeleton organization GO:0007010 96 0.015
regulation of binding GO:0051098 3 0.015
negative regulation of response to stimulus GO:0048585 104 0.015
positive regulation of biological process GO:0048518 253 0.015
Worm
gland development GO:0048732 143 0.015
blood vessel development GO:0001568 246 0.015
positive regulation of cellular amine metabolic process GO:0033240 0 0.015
phosphorus metabolic process GO:0006793 109 0.015
striated muscle cell differentiation GO:0051146 129 0.014
regulation of protein catabolic process GO:0042176 1 0.014
ribonucleoside monophosphate catabolic process GO:0009158 4 0.014
positive regulation of catabolic process GO:0009896 4 0.014
neuron projection morphogenesis GO:0048812 161 0.014
liver development GO:0001889 96 0.014
regulation of histone methylation GO:0031060 3 0.014
single organism cellular localization GO:1902580 46 0.014
axonogenesis GO:0007409 152 0.014
eye morphogenesis GO:0048592 144 0.014
neural retina development GO:0003407 49 0.014
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.013
regulation of intracellular protein transport GO:0033157 3 0.013
anatomical structure homeostasis GO:0060249 36 0.013
negative regulation of programmed cell death GO:0043069 58 0.013
multi organism cellular process GO:0044764 2 0.013
protein complex subunit organization GO:0071822 46 0.012
meiotic spindle organization GO:0000212 1 0.012
carboxylic acid metabolic process GO:0019752 22 0.012
cellular response to organic substance GO:0071310 105 0.012
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.012
regulation of cell communication GO:0010646 232 0.012
central nervous system development GO:0007417 387 0.012
blood circulation GO:0008015 87 0.012
negative regulation of protein kinase activity GO:0006469 4 0.012
ion homeostasis GO:0050801 41 0.012
regulation of cell proliferation GO:0042127 37 0.011
regulation of protein import into nucleus GO:0042306 2 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.011
primary neural tube formation GO:0014020 1 0.011
nucleocytoplasmic transport GO:0006913 4 0.011
phagocytosis GO:0006909 3 0.011
negative regulation of transcription dna templated GO:0045892 45 0.011
regulation of cell cycle process GO:0010564 20 0.011
rna transport GO:0050658 2 0.011
actomyosin structure organization GO:0031032 53 0.011
chemical homeostasis GO:0048878 49 0.010
regulation of nucleocytoplasmic transport GO:0046822 2 0.010
negative regulation of signal transduction GO:0009968 94 0.010
homeostasis of number of cells GO:0048872 62 0.010
positive regulation of chromosome organization GO:2001252 1 0.010
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.010

cpsf1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.019
cancer DOID:162 0 0.019
disease of cellular proliferation DOID:14566 0 0.019
organ system cancer DOID:0050686 0 0.013