Danio rerio

0 known processes

cpsf2

cleavage and polyadenylation specific factor 2

(Aliases: zgc:92484)

cpsf2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of mrna processing GO:0050684 3 0.519
nitrogen compound metabolic process GO:0006807 319 0.379
larval development GO:0002164 2 0.321
cellular aromatic compound metabolic process GO:0006725 295 0.276
nucleic acid metabolic process GO:0090304 244 0.263
rna splicing GO:0008380 16 0.251
heterocycle metabolic process GO:0046483 290 0.247
cellular nitrogen compound metabolic process GO:0034641 290 0.245
nucleobase containing compound metabolic process GO:0006139 274 0.225
nucleocytoplasmic transport GO:0006913 4 0.223
alternative mrna splicing via spliceosome GO:0000380 1 0.203
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.185
rna metabolic process GO:0016070 219 0.180
rna processing GO:0006396 25 0.178
protein localization to nucleus GO:0034504 3 0.136
nuclear transport GO:0051169 4 0.117
gene expression GO:0010467 252 0.117
organic cyclic compound metabolic process GO:1901360 301 0.114
positive regulation of chromatin modification GO:1903310 1 0.112
cellular macromolecule metabolic process GO:0044260 391 0.112
embryo development ending in birth or egg hatching GO:0009792 271 0.104
transcription from rna polymerase ii promoter GO:0006366 80 0.085
rna transport GO:0050658 2 0.083
regulation of mrna splicing via spliceosome GO:0048024 3 0.080
signal transduction GO:0007165 455 0.076
regulation of protein transport GO:0051223 3 0.075
locomotion GO:0040011 313 0.070
regulation of rna biosynthetic process GO:2001141 213 0.069
aging GO:0007568 2 0.068
nucleic acid templated transcription GO:0097659 181 0.067
meiotic nuclear division GO:0007126 4 0.067
regulation of nitrogen compound metabolic process GO:0051171 251 0.065
mrna metabolic process GO:0016071 20 0.064
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.064
rna localization GO:0006403 4 0.063
regulation of meiotic cell cycle GO:0051445 1 0.056
nuclear import GO:0051170 3 0.054
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.054
regulation of multicellular organismal development GO:2000026 223 0.053
nuclear export GO:0051168 1 0.053
organic substance biosynthetic process GO:1901576 289 0.052
cellular protein catabolic process GO:0044257 4 0.052
regulation of multicellular organism growth GO:0040014 4 0.052
negative regulation of biological process GO:0048519 304 0.051
growth GO:0040007 174 0.049
regionalization GO:0003002 274 0.049
organelle organization GO:0006996 227 0.049
positive regulation of chromosome organization GO:2001252 1 0.048
vasculature development GO:0001944 278 0.048
regulation of cell differentiation GO:0045595 142 0.047
multicellular organism growth GO:0035264 4 0.047
cellular nitrogen compound biosynthetic process GO:0044271 218 0.047
regulation of macromolecule metabolic process GO:0060255 317 0.047
cellular component biogenesis GO:0044085 178 0.046
germ cell development GO:0007281 22 0.045
regulation of intracellular protein transport GO:0033157 3 0.044
organonitrogen compound metabolic process GO:1901564 74 0.044
organelle assembly GO:0070925 110 0.044
nucleic acid transport GO:0050657 2 0.043
developmental growth GO:0048589 166 0.043
cellular macromolecule biosynthetic process GO:0034645 224 0.043
regulation of epithelial cell proliferation GO:0050678 3 0.042
female sex differentiation GO:0046660 4 0.042
establishment of protein localization to organelle GO:0072594 4 0.041
positive regulation of cell cycle GO:0045787 3 0.040
regulation of primary metabolic process GO:0080090 311 0.040
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.039
regulation of metabolic process GO:0019222 359 0.039
positive regulation of cellular component biogenesis GO:0044089 3 0.039
single organism metabolic process GO:0044710 217 0.038
mrna processing GO:0006397 14 0.038
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.038
regulation of protein localization to nucleus GO:1900180 2 0.038
blood vessel morphogenesis GO:0048514 216 0.038
response to stress GO:0006950 263 0.038
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.037
single organism nuclear import GO:1902593 3 0.037
rna 3 end processing GO:0031123 2 0.036
establishment of rna localization GO:0051236 3 0.036
regulation of multicellular organismal process GO:0051239 277 0.035
regulation of rna metabolic process GO:0051252 224 0.035
homeostatic process GO:0042592 142 0.035
positive regulation of transport GO:0051050 2 0.034
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.034
protein import into nucleus GO:0006606 3 0.034
negative regulation of macromolecule metabolic process GO:0010605 76 0.034
regulation of developmental process GO:0050793 247 0.033
negative regulation of mitosis GO:0045839 3 0.033
ribonucleoside monophosphate catabolic process GO:0009158 4 0.033
reproduction GO:0000003 40 0.033
macromolecule biosynthetic process GO:0009059 227 0.033
ubiquitin dependent protein catabolic process GO:0006511 3 0.032
maintenance of location GO:0051235 4 0.032
mrna transport GO:0051028 2 0.031
rna biosynthetic process GO:0032774 181 0.031
protein targeting to nucleus GO:0044744 3 0.030
heterocycle biosynthetic process GO:0018130 215 0.030
cell cycle GO:0007049 93 0.029
negative regulation of rna splicing GO:0033119 1 0.029
regulation of gene expression GO:0010468 265 0.028
positive regulation of biological process GO:0048518 253 0.028
cytoplasm organization GO:0007028 4 0.028
cellular biosynthetic process GO:0044249 286 0.028
negative regulation of developmental process GO:0051093 65 0.027
hatching GO:0035188 4 0.027
phagocytosis GO:0006909 3 0.027
purine nucleoside monophosphate catabolic process GO:0009128 4 0.027
nucleoside monophosphate catabolic process GO:0009125 4 0.026
nuclear pore organization GO:0006999 2 0.026
mitotic cell cycle GO:0000278 64 0.026
regulation of protein complex assembly GO:0043254 3 0.026
protein import GO:0017038 3 0.026
negative regulation of cellular process GO:0048523 283 0.026
stem cell differentiation GO:0048863 117 0.025
nucleobase containing compound transport GO:0015931 2 0.025
lipid storage GO:0019915 1 0.025
cell cycle arrest GO:0007050 1 0.025
regulation of cytoplasmic transport GO:1903649 4 0.025
establishment of localization in cell GO:0051649 77 0.024
rna export from nucleus GO:0006405 1 0.024
mrna export from nucleus GO:0006406 1 0.024
positive regulation of mrna splicing via spliceosome GO:0048026 1 0.024
regulation of cellular protein catabolic process GO:1903362 1 0.024
regulation of establishment of protein localization GO:0070201 4 0.024
regulation of cellular metabolic process GO:0031323 320 0.024
regulation of protein targeting GO:1903533 2 0.023
atp catabolic process GO:0006200 4 0.023
blood vessel development GO:0001568 246 0.023
negative regulation of metabolic process GO:0009892 86 0.023
single organism transport GO:0044765 206 0.023
synaptic growth at neuromuscular junction GO:0051124 2 0.023
mrna splicing via spliceosome GO:0000398 10 0.022
fertilization GO:0009566 3 0.022
biosynthetic process GO:0009058 294 0.022
regulation of nucleocytoplasmic transport GO:0046822 2 0.022
female gonad development GO:0008585 4 0.022
single organism organelle organization GO:1902589 199 0.022
modification dependent macromolecule catabolic process GO:0043632 3 0.022
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.022
mitochondrion organization GO:0007005 4 0.022
regulation of gene expression epigenetic GO:0040029 11 0.022
proteasomal protein catabolic process GO:0010498 2 0.021
response to organic substance GO:0010033 153 0.021
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.021
regulation of protein catabolic process GO:0042176 1 0.021
microtubule cytoskeleton organization GO:0000226 33 0.021
negative regulation of signal transduction GO:0009968 94 0.020
regulation of macromolecule biosynthetic process GO:0010556 225 0.020
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.020
modification dependent protein catabolic process GO:0019941 3 0.020
organism emergence from protective structure GO:0071684 4 0.020
regulation of anatomical structure morphogenesis GO:0022603 130 0.020
positive regulation of cellular process GO:0048522 201 0.020
mrna 3 end processing GO:0031124 2 0.020
intracellular mrna localization GO:0008298 1 0.020
mitotic cell cycle process GO:1903047 48 0.020
stem cell maintenance GO:0019827 4 0.020
spermatid development GO:0007286 2 0.020
multi organism cellular process GO:0044764 2 0.019
dna templated transcription elongation GO:0006354 3 0.019
cellular amine metabolic process GO:0044106 2 0.019
cell cycle process GO:0022402 53 0.019
developmental growth involved in morphogenesis GO:0060560 86 0.019
mitotic nuclear division GO:0007067 18 0.018
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.018
negative regulation of catabolic process GO:0009895 3 0.018
regulation of cellular biosynthetic process GO:0031326 245 0.018
oocyte anterior posterior axis specification GO:0007314 4 0.018
positive regulation of dna metabolic process GO:0051054 1 0.018
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.018
regulation of cellular component organization GO:0051128 86 0.018
regulation of nucleic acid templated transcription GO:1903506 213 0.018
regulation of biosynthetic process GO:0009889 250 0.018
response to abiotic stimulus GO:0009628 122 0.018
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.017
regulation of cell development GO:0060284 100 0.017
negative regulation of cytoplasmic transport GO:1903650 2 0.017
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.017
protein complex subunit organization GO:0071822 46 0.017
cell motility GO:0048870 244 0.017
negative regulation of nuclear division GO:0051784 3 0.017
developmental cell growth GO:0048588 52 0.017
astrocyte differentiation GO:0048708 1 0.017
negative regulation of cell differentiation GO:0045596 46 0.017
regulation of synapse organization GO:0050807 3 0.016
double strand break repair GO:0006302 3 0.016
single organism reproductive process GO:0044702 40 0.016
regulation of reproductive process GO:2000241 4 0.016
apoptotic process GO:0006915 116 0.016
somatic muscle development GO:0007525 4 0.016
spliceosomal complex assembly GO:0000245 1 0.015
multi organism process GO:0051704 134 0.015
anterior posterior pattern specification GO:0009952 152 0.015
negative regulation of mrna splicing via spliceosome GO:0048025 1 0.015
chordate embryonic development GO:0043009 271 0.015
organelle fission GO:0048285 23 0.015
rna splicing via transesterification reactions GO:0000375 10 0.015
amine metabolic process GO:0009308 2 0.015
development of primary female sexual characteristics GO:0046545 4 0.015
camera type eye development GO:0043010 222 0.015
cellular response to starvation GO:0009267 1 0.015
protein homooligomerization GO:0051260 3 0.015
cytoskeleton organization GO:0007010 96 0.015
multicellular organismal reproductive process GO:0048609 35 0.015
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
regulation of signaling GO:0023051 235 0.014
cellular component assembly GO:0022607 170 0.014
rrna catabolic process GO:0016075 1 0.014
nucleobase containing compound biosynthetic process GO:0034654 205 0.014
oocyte maturation GO:0001556 4 0.014
ncrna metabolic process GO:0034660 12 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
positive regulation of gliogenesis GO:0014015 2 0.014
negative regulation of rna biosynthetic process GO:1902679 45 0.014
transcription dna templated GO:0006351 181 0.014
regulation of cellular amine metabolic process GO:0033238 0 0.014
negative regulation of multicellular organismal process GO:0051241 69 0.014
negative regulation of gene expression GO:0010629 65 0.013
generation of neurons GO:0048699 385 0.013
oxoacid metabolic process GO:0043436 31 0.013
cell substrate junction assembly GO:0007044 2 0.013
ribonucleoprotein complex subunit organization GO:0071826 8 0.013
positive regulation of mrna metabolic process GO:1903313 2 0.013
glucose homeostasis GO:0042593 1 0.013
regulation of chromatin organization GO:1902275 5 0.013
regulation of protein import into nucleus GO:0042306 2 0.013
negative regulation of epithelial cell proliferation GO:0050680 1 0.013
immune system development GO:0002520 191 0.013
regulation of nuclear division GO:0051783 9 0.013
double strand break repair via nonhomologous end joining GO:0006303 1 0.013
carboxylic acid metabolic process GO:0019752 22 0.013
rna polyadenylation GO:0043631 2 0.012
angiogenesis GO:0001525 158 0.012
negative regulation of chromosome organization GO:2001251 1 0.012
regulation of cellular ketone metabolic process GO:0010565 7 0.012
positive regulation of rna splicing GO:0033120 1 0.012
negative regulation of sequestering of calcium ion GO:0051283 4 0.012
macromolecular complex subunit organization GO:0043933 74 0.012
muscle cell development GO:0055001 115 0.012
small molecule metabolic process GO:0044281 77 0.012
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.012
macromolecular complex disassembly GO:0032984 1 0.012
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.012
regulation of rna splicing GO:0043484 8 0.012
protein n linked glycosylation GO:0006487 1 0.012
macromolecular complex assembly GO:0065003 35 0.012
eye development GO:0001654 277 0.012
cellular ketone metabolic process GO:0042180 11 0.012
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.012
cell death GO:0008219 121 0.012
regulation of synapse assembly GO:0051963 3 0.012
cellular macromolecular complex assembly GO:0034622 24 0.011
regulation of cell communication GO:0010646 232 0.011
establishment of localization GO:0051234 244 0.011
microtubule based process GO:0007017 60 0.011
gamete generation GO:0007276 33 0.011
spindle assembly involved in mitosis GO:0090307 1 0.011
cellular amino acid metabolic process GO:0006520 7 0.011
single organism localization GO:1902578 225 0.011
protein metabolic process GO:0019538 183 0.011
positive regulation of cellular metabolic process GO:0031325 94 0.011
interspecies interaction between organisms GO:0044419 4 0.011
cellular response to organic substance GO:0071310 105 0.011
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.011
positive regulation of histone modification GO:0031058 1 0.011
hemopoiesis GO:0030097 183 0.011
multicellular organism reproduction GO:0032504 35 0.011
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.011
enzyme linked receptor protein signaling pathway GO:0007167 106 0.011
ribonucleotide metabolic process GO:0009259 27 0.011
response to ketone GO:1901654 1 0.011
regulation of biological quality GO:0065008 263 0.011
negative regulation of synapse assembly GO:0051964 2 0.011
programmed cell death GO:0012501 119 0.011
cellular component movement GO:0006928 335 0.011
positive regulation of lymphocyte mediated immunity GO:0002708 1 0.011
digestive system development GO:0055123 289 0.011
single organism cellular localization GO:1902580 46 0.011
negative regulation of rna metabolic process GO:0051253 48 0.011
carbohydrate derivative metabolic process GO:1901135 61 0.011
muscle cell differentiation GO:0042692 139 0.011
positive regulation of cellular amine metabolic process GO:0033240 0 0.011
negative regulation of mrna metabolic process GO:1903312 3 0.010
regulation of cellular amino acid metabolic process GO:0006521 0 0.010
germ line stem cell maintenance GO:0030718 2 0.010
response to alkaloid GO:0043279 2 0.010
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.010
regulation of cell shape GO:0008360 1 0.010
cellular component morphogenesis GO:0032989 336 0.010

cpsf2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.039
nervous system disease DOID:863 0 0.031
disease of metabolism DOID:0014667 0 0.018