Danio rerio

31 known processes

cpsf3l

cleavage and polyadenylation specific factor 3-like

(Aliases: zgc:110671,MGC110671)

cpsf3l biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.245
cellular macromolecule metabolic process GO:0044260 391 0.184
locomotion GO:0040011 313 0.125
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.113
nitrogen compound metabolic process GO:0006807 319 0.108
modification dependent protein catabolic process GO:0019941 3 0.108
regulation of gene expression GO:0010468 265 0.101
ubiquitin dependent protein catabolic process GO:0006511 3 0.100
cellular protein catabolic process GO:0044257 4 0.086
embryo development ending in birth or egg hatching GO:0009792 271 0.077
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.074
neuron differentiation GO:0030182 353 0.069
cellular protein metabolic process GO:0044267 129 0.066
protein metabolic process GO:0019538 183 0.065
modification dependent macromolecule catabolic process GO:0043632 3 0.063
cellular biosynthetic process GO:0044249 286 0.060
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.060
organic substance biosynthetic process GO:1901576 289 0.058
regulation of protein catabolic process GO:0042176 1 0.058
gene expression GO:0010467 252 0.057
digestive system development GO:0055123 289 0.056
digestive tract development GO:0048565 265 0.056
negative regulation of mitosis GO:0045839 3 0.051
proteasomal protein catabolic process GO:0010498 2 0.051
positive regulation of cell cycle GO:0045787 3 0.050
cellular nitrogen compound biosynthetic process GO:0044271 218 0.049
cell projection organization GO:0030030 284 0.049
tube morphogenesis GO:0035239 349 0.048
cellular protein modification process GO:0006464 100 0.047
alpha amino acid metabolic process GO:1901605 3 0.046
maintenance of location GO:0051235 4 0.046
macromolecule biosynthetic process GO:0009059 227 0.043
head development GO:0060322 303 0.042
aging GO:0007568 2 0.042
cell part morphogenesis GO:0032990 246 0.042
positive regulation of cellular catabolic process GO:0031331 3 0.041
organelle organization GO:0006996 227 0.041
protein polyubiquitination GO:0000209 4 0.040
cell projection morphogenesis GO:0048858 244 0.039
transcription dna templated GO:0006351 181 0.039
positive regulation of catabolic process GO:0009896 4 0.039
regulation of metabolic process GO:0019222 359 0.038
lipid storage GO:0019915 1 0.038
cell morphogenesis GO:0000902 289 0.038
single organism metabolic process GO:0044710 217 0.037
single organism organelle organization GO:1902589 199 0.037
stem cell proliferation GO:0072089 4 0.035
cellular component movement GO:0006928 335 0.035
central nervous system development GO:0007417 387 0.035
biosynthetic process GO:0009058 294 0.035
cellular aromatic compound metabolic process GO:0006725 295 0.033
transport GO:0006810 220 0.033
regulation of chromosome segregation GO:0051983 1 0.033
response to chemical GO:0042221 320 0.032
purine nucleoside monophosphate catabolic process GO:0009128 4 0.031
nucleic acid metabolic process GO:0090304 244 0.031
regulation of protein metabolic process GO:0051246 56 0.031
regulation of multicellular organismal process GO:0051239 277 0.030
regulation of cellular protein catabolic process GO:1903362 1 0.030
morphogenesis of an epithelium GO:0002009 333 0.029
localization of cell GO:0051674 244 0.029
establishment of localization GO:0051234 244 0.029
neuron projection development GO:0031175 180 0.028
rna metabolic process GO:0016070 219 0.028
translational initiation GO:0006413 3 0.028
cellular macromolecule biosynthetic process GO:0034645 224 0.028
organonitrogen compound metabolic process GO:1901564 74 0.028
digestive tract morphogenesis GO:0048546 231 0.028
regulation of proteolysis GO:0030162 24 0.028
single fertilization GO:0007338 3 0.027
regulation of cellular metabolic process GO:0031323 320 0.027
fertilization GO:0009566 3 0.027
rna biosynthetic process GO:0032774 181 0.027
macromolecule modification GO:0043412 111 0.027
cell morphogenesis involved in differentiation GO:0000904 195 0.026
nucleobase containing compound metabolic process GO:0006139 274 0.026
ribonucleoside monophosphate catabolic process GO:0009158 4 0.026
heterocycle metabolic process GO:0046483 290 0.026
regulation of primary metabolic process GO:0080090 311 0.025
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.025
cellular component morphogenesis GO:0032989 336 0.025
meiotic nuclear division GO:0007126 4 0.025
regulation of histone methylation GO:0031060 3 0.025
regulation of nitrogen compound metabolic process GO:0051171 251 0.025
negative regulation of protein phosphorylation GO:0001933 4 0.024
nucleic acid templated transcription GO:0097659 181 0.024
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.024
positive regulation of transport GO:0051050 2 0.024
sister chromatid cohesion GO:0007062 2 0.024
nucleocytoplasmic transport GO:0006913 4 0.023
establishment of protein localization to organelle GO:0072594 4 0.023
multi organism process GO:0051704 134 0.023
regulation of cytokine production GO:0001817 3 0.023
regulation of cellular amine metabolic process GO:0033238 0 0.023
meiotic cell cycle process GO:1903046 3 0.023
autophagy GO:0006914 4 0.023
determination of bilateral symmetry GO:0009855 204 0.023
interspecies interaction between organisms GO:0044419 4 0.022
cell migration GO:0016477 237 0.022
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.022
regulation of meiotic cell cycle GO:0051445 1 0.022
telomere organization GO:0032200 1 0.022
regulation of macromolecule metabolic process GO:0060255 317 0.022
regulation of cellular amino acid metabolic process GO:0006521 0 0.022
brain development GO:0007420 293 0.021
nucleoside monophosphate catabolic process GO:0009125 4 0.021
amine metabolic process GO:0009308 2 0.021
locomotor rhythm GO:0045475 3 0.021
multicellular organism growth GO:0035264 4 0.021
neuron development GO:0048666 262 0.021
response to external stimulus GO:0009605 264 0.021
protein acetylation GO:0006473 2 0.021
rna localization GO:0006403 4 0.020
positive regulation of cytoskeleton organization GO:0051495 3 0.020
phagocytosis GO:0006909 3 0.020
regulation of mitotic cell cycle phase transition GO:1901990 8 0.020
stem cell division GO:0017145 1 0.020
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.020
regulation of developmental process GO:0050793 247 0.020
protein heterooligomerization GO:0051291 1 0.020
generation of neurons GO:0048699 385 0.020
adult behavior GO:0030534 2 0.020
regulation of signaling GO:0023051 235 0.019
cellular amine metabolic process GO:0044106 2 0.019
single organism transport GO:0044765 206 0.019
cell surface receptor signaling pathway GO:0007166 325 0.019
negative regulation of catabolic process GO:0009895 3 0.019
secondary metabolic process GO:0019748 3 0.019
cytokinesis GO:0000910 3 0.019
carboxylic acid metabolic process GO:0019752 22 0.019
cellular response to external stimulus GO:0071496 2 0.019
rna polyadenylation GO:0043631 2 0.019
synaptic growth at neuromuscular junction GO:0051124 2 0.019
regionalization GO:0003002 274 0.019
gtp metabolic process GO:0046039 4 0.018
positive regulation of biological process GO:0048518 253 0.018
negative regulation of cellular catabolic process GO:0031330 3 0.018
cellular nitrogen compound metabolic process GO:0034641 290 0.018
neuron projection morphogenesis GO:0048812 161 0.018
axonogenesis GO:0007409 152 0.018
guanosine containing compound metabolic process GO:1901068 4 0.018
mitotic recombination GO:0006312 2 0.018
negative regulation of epithelial cell proliferation GO:0050680 1 0.018
aromatic compound biosynthetic process GO:0019438 217 0.018
organism emergence from protective structure GO:0071684 4 0.018
positive regulation of cellular component biogenesis GO:0044089 3 0.018
regulation of nucleoside metabolic process GO:0009118 2 0.018
protein modification process GO:0036211 100 0.018
regulation of cellular ketone metabolic process GO:0010565 7 0.018
cellular amino acid metabolic process GO:0006520 7 0.017
epithelial tube morphogenesis GO:0060562 148 0.017
phosphorus metabolic process GO:0006793 109 0.017
eye development GO:0001654 277 0.017
alternative mrna splicing via spliceosome GO:0000380 1 0.017
spermatid differentiation GO:0048515 2 0.017
production of molecular mediator of immune response GO:0002440 2 0.017
regulation of nucleotide catabolic process GO:0030811 2 0.017
rna export from nucleus GO:0006405 1 0.017
neuroblast proliferation GO:0007405 2 0.017
b cell mediated immunity GO:0019724 3 0.017
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.017
cellular response to nutrient levels GO:0031669 2 0.016
meiotic chromosome segregation GO:0045132 3 0.016
protein complex disassembly GO:0043241 1 0.016
regulation of binding GO:0051098 3 0.016
cellular catabolic process GO:0044248 27 0.016
protein polymerization GO:0051258 4 0.016
guanosine containing compound catabolic process GO:1901069 2 0.016
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.016
cell cycle GO:0007049 93 0.016
cell motility GO:0048870 244 0.016
signal transduction GO:0007165 455 0.016
internal peptidyl lysine acetylation GO:0018393 2 0.016
extrinsic apoptotic signaling pathway GO:0097191 3 0.016
muscle structure development GO:0061061 196 0.016
male meiosis GO:0007140 2 0.016
proteolysis GO:0006508 38 0.016
negative regulation of kinase activity GO:0033673 4 0.016
cellular response to extracellular stimulus GO:0031668 2 0.016
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.015
lipid homeostasis GO:0055088 3 0.015
stem cell maintenance GO:0019827 4 0.015
regulation of purine nucleotide catabolic process GO:0033121 2 0.015
cellular component disassembly GO:0022411 1 0.015
positive regulation of nucleotide catabolic process GO:0030813 1 0.015
regulation of dna templated transcription elongation GO:0032784 3 0.015
cellular ketone metabolic process GO:0042180 11 0.015
nucleobase containing compound biosynthetic process GO:0034654 205 0.015
somitogenesis GO:0001756 87 0.015
camera type eye development GO:0043010 222 0.015
protein import GO:0017038 3 0.015
positive regulation of cellular process GO:0048522 201 0.015
somite development GO:0061053 96 0.015
atp catabolic process GO:0006200 4 0.015
positive regulation of multi organism process GO:0043902 3 0.015
oxoacid metabolic process GO:0043436 31 0.015
protein acylation GO:0043543 3 0.015
regulation of synapse organization GO:0050807 3 0.015
taxis GO:0042330 109 0.015
dna templated transcription elongation GO:0006354 3 0.015
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
positive regulation of cellular amine metabolic process GO:0033240 0 0.014
behavior GO:0007610 74 0.014
microtubule polymerization or depolymerization GO:0031109 3 0.014
regulation of molecular function GO:0065009 70 0.014
chemosensory behavior GO:0007635 1 0.014
female gonad development GO:0008585 4 0.014
reciprocal meiotic recombination GO:0007131 1 0.014
regulation of cellular protein metabolic process GO:0032268 52 0.014
growth GO:0040007 174 0.014
multi organism cellular process GO:0044764 2 0.014
heterocycle biosynthetic process GO:0018130 215 0.014
regulation of mrna processing GO:0050684 3 0.014
viral process GO:0016032 1 0.014
phosphate containing compound metabolic process GO:0006796 108 0.014
negative regulation of biological process GO:0048519 304 0.014
positive regulation of cellular metabolic process GO:0031325 94 0.014
negative regulation of nuclear division GO:0051784 3 0.014
protein import into nucleus GO:0006606 3 0.014
adherens junction organization GO:0034332 4 0.014
nuclear import GO:0051170 3 0.014
double strand break repair via homologous recombination GO:0000724 1 0.014
response to nutrient GO:0007584 3 0.014
negative regulation of synapse assembly GO:0051964 2 0.014
regulation of mitotic cell cycle GO:0007346 25 0.014
nuclear transport GO:0051169 4 0.014
regulation of dna recombination GO:0000018 2 0.014
regulation of protein binding GO:0043393 3 0.014
positive regulation of chromatin modification GO:1903310 1 0.014
regulation of rna biosynthetic process GO:2001141 213 0.014
developmental growth GO:0048589 166 0.014
positive regulation of striated muscle tissue development GO:0045844 1 0.014
regulation of cell communication GO:0010646 232 0.013
hematopoietic or lymphoid organ development GO:0048534 191 0.013
regulation of multicellular organismal development GO:2000026 223 0.013
female sex differentiation GO:0046660 4 0.013
organic cyclic compound metabolic process GO:1901360 301 0.013
regulation of autophagy GO:0010506 3 0.013
regulation of catalytic activity GO:0050790 55 0.013
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.013
protein targeting to nucleus GO:0044744 3 0.013
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.013
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.013
covalent chromatin modification GO:0016569 20 0.013
b cell activation GO:0042113 2 0.013
regulation of transcription dna templated GO:0006355 213 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
developmental programmed cell death GO:0010623 4 0.013
regulation of macromolecule biosynthetic process GO:0010556 225 0.013
gastrulation GO:0007369 208 0.013
regulation of multicellular organism growth GO:0040014 4 0.013
peptidyl serine modification GO:0018209 2 0.013
regulation of protein transport GO:0051223 3 0.013
negative regulation of dna metabolic process GO:0051053 4 0.013
regulation of synapse assembly GO:0051963 3 0.013
cell death GO:0008219 121 0.013
g1 s transition of mitotic cell cycle GO:0000082 1 0.013
specification of symmetry GO:0009799 204 0.013
mitotic dna integrity checkpoint GO:0044774 4 0.013
recombinational repair GO:0000725 1 0.013
chromosome organization involved in meiosis GO:0070192 1 0.013
protein stabilization GO:0050821 2 0.013
immune system process GO:0002376 241 0.013
regulation of cell cycle phase transition GO:1901987 8 0.012
regulation of protein ubiquitination GO:0031396 3 0.012
macromolecular complex disassembly GO:0032984 1 0.012
positive regulation of dna templated transcription elongation GO:0032786 1 0.012
cellular component biogenesis GO:0044085 178 0.012
chromosome organization GO:0051276 31 0.012
embryonic organ morphogenesis GO:0048562 274 0.012
regulation of heart growth GO:0060420 2 0.012
negative regulation of protein kinase activity GO:0006469 4 0.012
blood vessel morphogenesis GO:0048514 216 0.012
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.012
negative regulation of myeloid cell differentiation GO:0045638 1 0.012
dorsal ventral pattern formation GO:0009953 125 0.012
response to corticosteroid GO:0031960 1 0.012
vasculature development GO:0001944 278 0.012
cellular response to chemical stimulus GO:0070887 157 0.012
regulation of establishment of protein localization GO:0070201 4 0.012
regulation of mesenchymal cell proliferation GO:0010464 1 0.012
gtp catabolic process GO:0006184 2 0.012
response to drug GO:0042493 3 0.012
development of primary female sexual characteristics GO:0046545 4 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
meiosis i GO:0007127 1 0.012
regulation of nucleocytoplasmic transport GO:0046822 2 0.012
hatching GO:0035188 4 0.012
chemotaxis GO:0006935 104 0.012
nuclear export GO:0051168 1 0.012
spindle assembly GO:0051225 2 0.012
regulation of stem cell proliferation GO:0072091 2 0.012
g2 m transition of mitotic cell cycle GO:0000086 4 0.012
wnt signaling pathway GO:0016055 80 0.011
positive regulation of mesenchymal cell proliferation GO:0002053 1 0.011
peptidyl lysine acetylation GO:0018394 2 0.011
mrna cleavage GO:0006379 1 0.011
cellular localization GO:0051641 97 0.011
multicellular organismal metabolic process GO:0044236 2 0.011
cell substrate adhesion GO:0031589 4 0.011
primary neural tube formation GO:0014020 1 0.011
negative regulation of chromosome organization GO:2001251 1 0.011
positive regulation of molecular function GO:0044093 33 0.011
ventricular cardiac muscle tissue morphogenesis GO:0055010 2 0.011
mitotic dna damage checkpoint GO:0044773 4 0.011
organic cyclic compound biosynthetic process GO:1901362 223 0.011
rna transport GO:0050658 2 0.011
catabolic process GO:0009056 32 0.011
positive regulation of muscle tissue development GO:1901863 1 0.011
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.011
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.011
cell fate commitment GO:0045165 99 0.011
mrna transport GO:0051028 2 0.011
cognition GO:0050890 1 0.011
mrna metabolic process GO:0016071 20 0.011
regulation of gtpase activity GO:0043087 2 0.011
histone h3 k4 methylation GO:0051568 2 0.011
embryonic digestive tract development GO:0048566 4 0.011
regulation of biological quality GO:0065008 263 0.011
positive regulation of histone modification GO:0031058 1 0.011
response to carbohydrate GO:0009743 3 0.011
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.010
immunoglobulin mediated immune response GO:0016064 3 0.010
cell cycle g2 m phase transition GO:0044839 4 0.010
positive regulation of muscle cell differentiation GO:0051149 1 0.010
sensory organ morphogenesis GO:0090596 200 0.010
heart looping GO:0001947 94 0.010
nucleic acid transport GO:0050657 2 0.010
immune system development GO:0002520 191 0.010
sensory organ development GO:0007423 393 0.010
negative regulation of intracellular transport GO:0032387 3 0.010
carbohydrate homeostasis GO:0033500 1 0.010
regulation of epithelial cell proliferation GO:0050678 3 0.010
epithelial cell morphogenesis GO:0003382 2 0.010
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.010
response to abiotic stimulus GO:0009628 122 0.010
skeletal system development GO:0001501 181 0.010
regulation of translational initiation GO:0006446 1 0.010
rna 3 end processing GO:0031123 2 0.010
organic acid metabolic process GO:0006082 31 0.010
regulation of signal transduction GO:0009966 225 0.010
regulation of cell activation GO:0050865 1 0.010
positive regulation of muscle organ development GO:0048636 1 0.010
positive regulation of nucleoside metabolic process GO:0045979 1 0.010
regulation of neural precursor cell proliferation GO:2000177 3 0.010

cpsf3l disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
disease of anatomical entity DOID:7 0 0.011
nervous system disease DOID:863 0 0.011
organ system cancer DOID:0050686 0 0.011
disease of metabolism DOID:0014667 0 0.010
inherited metabolic disorder DOID:655 0 0.010