Danio rerio

0 known processes

cstf3

cleavage stimulation factor, 3' pre-RNA, subunit 3

(Aliases: zgc:56028,wu:fb18b09,wu:fa99c02)

cstf3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.414
nitrogen compound metabolic process GO:0006807 319 0.319
Yeast
regulation of metabolic process GO:0019222 359 0.245
Fly
biosynthetic process GO:0009058 294 0.216
nuclear transport GO:0051169 4 0.207
organic cyclic compound metabolic process GO:1901360 301 0.207
Yeast
cellular aromatic compound metabolic process GO:0006725 295 0.188
Yeast
embryo development ending in birth or egg hatching GO:0009792 271 0.177
Worm
nucleocytoplasmic transport GO:0006913 4 0.172
nucleic acid metabolic process GO:0090304 244 0.166
Yeast
heterocycle metabolic process GO:0046483 290 0.165
Yeast
negative regulation of biological process GO:0048519 304 0.161
positive regulation of biological process GO:0048518 253 0.157
Fly
regulation of transcription dna templated GO:0006355 213 0.138
cellular macromolecule metabolic process GO:0044260 391 0.137
Yeast
heterocycle biosynthetic process GO:0018130 215 0.132
organelle organization GO:0006996 227 0.130
regulation of meiotic cell cycle GO:0051445 1 0.125
nucleobase containing compound metabolic process GO:0006139 274 0.124
Yeast
locomotion GO:0040011 313 0.120
protein import GO:0017038 3 0.118
negative regulation of synapse assembly GO:0051964 2 0.110
cell motility GO:0048870 244 0.110
single organism metabolic process GO:0044710 217 0.104
Fly
rna metabolic process GO:0016070 219 0.101
Yeast
stem cell maintenance GO:0019827 4 0.099
protein localization to nucleus GO:0034504 3 0.098
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.097
regulation of gene expression GO:0010468 265 0.097
rna polyadenylation GO:0043631 2 0.096
Yeast
cellular component movement GO:0006928 335 0.093
regulation of biosynthetic process GO:0009889 250 0.090
response to chemical GO:0042221 320 0.090
regulation of macromolecule biosynthetic process GO:0010556 225 0.089
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.086
phagocytosis GO:0006909 3 0.086
gene expression GO:0010467 252 0.086
Yeast
aging GO:0007568 2 0.077
regulation of nucleic acid templated transcription GO:1903506 213 0.076
regulation of cellular biosynthetic process GO:0031326 245 0.076
cell surface receptor signaling pathway GO:0007166 325 0.075
nuclear import GO:0051170 3 0.074
cellular nitrogen compound biosynthetic process GO:0044271 218 0.074
aromatic compound biosynthetic process GO:0019438 217 0.074
regulation of anatomical structure morphogenesis GO:0022603 130 0.073
negative regulation of cellular process GO:0048523 283 0.072
single organism nuclear import GO:1902593 3 0.072
regulation of nitrogen compound metabolic process GO:0051171 251 0.072
nucleobase containing compound biosynthetic process GO:0034654 205 0.071
macromolecule biosynthetic process GO:0009059 227 0.071
regulation of rna biosynthetic process GO:2001141 213 0.071
protein targeting to nucleus GO:0044744 3 0.070
organelle assembly GO:0070925 110 0.066
transcription dna templated GO:0006351 181 0.065
organic substance biosynthetic process GO:1901576 289 0.063
regulation of multicellular organism growth GO:0040014 4 0.063
organic cyclic compound biosynthetic process GO:1901362 223 0.061
cellular nitrogen compound metabolic process GO:0034641 290 0.061
Yeast
establishment of localization GO:0051234 244 0.061
protein import into nucleus GO:0006606 3 0.060
organelle localization GO:0051640 49 0.058
regulation of protein targeting GO:1903533 2 0.056
cell morphogenesis GO:0000902 289 0.056
adult behavior GO:0030534 2 0.055
establishment of protein localization to organelle GO:0072594 4 0.055
cellular biosynthetic process GO:0044249 286 0.055
regulation of developmental process GO:0050793 247 0.055
single organism localization GO:1902578 225 0.055
cognition GO:0050890 1 0.055
sex determination GO:0007530 1 0.054
positive regulation of jun kinase activity GO:0043507 2 0.053
oxoacid metabolic process GO:0043436 31 0.053
wnt signaling pathway GO:0016055 80 0.052
nuclear export GO:0051168 1 0.051
rna biosynthetic process GO:0032774 181 0.051
cellular amine metabolic process GO:0044106 2 0.050
positive regulation of map kinase activity GO:0043406 3 0.050
regionalization GO:0003002 274 0.050
single organism organelle organization GO:1902589 199 0.049
regulation of protein localization to nucleus GO:1900180 2 0.049
response to external stimulus GO:0009605 264 0.048
regulation of macromolecule metabolic process GO:0060255 317 0.047
multicellular organism growth GO:0035264 4 0.047
generation of neurons GO:0048699 385 0.046
carboxylic acid metabolic process GO:0019752 22 0.045
positive regulation of cellular amine metabolic process GO:0033240 0 0.045
protein metabolic process GO:0019538 183 0.044
regulation of rna metabolic process GO:0051252 224 0.043
regulation of cellular metabolic process GO:0031323 320 0.043
negative regulation of stem cell differentiation GO:2000737 2 0.043
cellular component morphogenesis GO:0032989 336 0.042
stem cell proliferation GO:0072089 4 0.041
cell death GO:0008219 121 0.041
transport GO:0006810 220 0.040
response to stress GO:0006950 263 0.040
regulation of signal transduction GO:0009966 225 0.039
cellular ketone metabolic process GO:0042180 11 0.039
regulation of stem cell differentiation GO:2000736 4 0.039
rna localization GO:0006403 4 0.038
chemotaxis GO:0006935 104 0.037
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.037
small molecule metabolic process GO:0044281 77 0.037
localization of cell GO:0051674 244 0.037
regulation of cellular amine metabolic process GO:0033238 0 0.037
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.037
nucleic acid templated transcription GO:0097659 181 0.036
production of molecular mediator of immune response GO:0002440 2 0.036
rna 3 end processing GO:0031123 2 0.036
Yeast
regulation of epithelial cell proliferation GO:0050678 3 0.036
sexual reproduction GO:0019953 36 0.035
macromolecular complex subunit organization GO:0043933 74 0.035
negative regulation of epithelial cell proliferation GO:0050680 1 0.035
amine metabolic process GO:0009308 2 0.035
heart development GO:0007507 313 0.035
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.034
negative regulation of developmental process GO:0051093 65 0.033
positive regulation of chromatin modification GO:1903310 1 0.033
positive regulation of metabolic process GO:0009893 108 0.033
Fly
regulation of synapse organization GO:0050807 3 0.033
axon development GO:0061564 166 0.032
neuromuscular synaptic transmission GO:0007274 2 0.032
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.032
regulation of multicellular organismal development GO:2000026 223 0.032
cellular component biogenesis GO:0044085 178 0.032
central nervous system development GO:0007417 387 0.031
protein polyubiquitination GO:0000209 4 0.031
negative regulation of gene expression GO:0010629 65 0.031
modification dependent macromolecule catabolic process GO:0043632 3 0.031
maintenance of location GO:0051235 4 0.031
regulation of cellular ketone metabolic process GO:0010565 7 0.030
meiotic nuclear division GO:0007126 4 0.030
cellular macromolecule biosynthetic process GO:0034645 224 0.030
transcription from rna polymerase iii promoter GO:0006383 1 0.029
regulation of protein transport GO:0051223 3 0.029
regulation of stem cell proliferation GO:0072091 2 0.029
organic acid metabolic process GO:0006082 31 0.028
macromolecule modification GO:0043412 111 0.028
regulation of signaling GO:0023051 235 0.028
stem cell development GO:0048864 82 0.028
growth GO:0040007 174 0.028
regulation of biological quality GO:0065008 263 0.028
axon guidance GO:0007411 86 0.028
positive regulation of transport GO:0051050 2 0.028
cellular amino acid metabolic process GO:0006520 7 0.028
female gonad development GO:0008585 4 0.028
synaptic growth at neuromuscular junction GO:0051124 2 0.028
cell migration GO:0016477 237 0.028
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.028
establishment of spindle orientation GO:0051294 10 0.027
regulation of establishment of protein localization GO:0070201 4 0.027
single organism reproductive process GO:0044702 40 0.027
erk1 and erk2 cascade GO:0070371 4 0.027
cell morphogenesis involved in differentiation GO:0000904 195 0.026
regulation of chromosome segregation GO:0051983 1 0.026
signal transduction GO:0007165 455 0.026
axonogenesis GO:0007409 152 0.026
regulation of jun kinase activity GO:0043506 3 0.026
positive regulation of dna metabolic process GO:0051054 1 0.026
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.026
cellular component disassembly GO:0022411 1 0.026
negative regulation of cell differentiation GO:0045596 46 0.026
regulation of cell differentiation GO:0045595 142 0.025
regulation of programmed cell death GO:0043067 101 0.025
regulation of transcription from rna polymerase iii promoter GO:0006359 1 0.025
homeostatic process GO:0042592 142 0.025
cell projection organization GO:0030030 284 0.025
digestive tract development GO:0048565 265 0.025
regulation of cell communication GO:0010646 232 0.025
regulation of synapse assembly GO:0051963 3 0.025
female sex differentiation GO:0046660 4 0.024
regulation of protein import into nucleus GO:0042306 2 0.024
positive regulation of catabolic process GO:0009896 4 0.024
regulation of protein catabolic process GO:0042176 1 0.024
negative regulation of signal transduction GO:0009968 94 0.024
neuron differentiation GO:0030182 353 0.024
developmental growth GO:0048589 166 0.024
positive regulation of cellular process GO:0048522 201 0.024
neuroblast proliferation GO:0007405 2 0.024
regulation of cellular amino acid metabolic process GO:0006521 0 0.024
specification of organ identity GO:0010092 2 0.023
negative regulation of multicellular organismal process GO:0051241 69 0.023
lateral inhibition GO:0046331 1 0.023
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.023
covalent chromatin modification GO:0016569 20 0.023
chemosensory behavior GO:0007635 1 0.023
regulation of nucleocytoplasmic transport GO:0046822 2 0.023
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.022
modification dependent protein catabolic process GO:0019941 3 0.022
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.022
response to endogenous stimulus GO:0009719 83 0.022
Yeast
dna templated transcription elongation GO:0006354 3 0.022
regulation of organelle organization GO:0033043 29 0.022
regulation of neural precursor cell proliferation GO:2000177 3 0.022
negative regulation of cell cycle phase transition GO:1901988 5 0.022
cellular response to nutrient levels GO:0031669 2 0.022
cell projection morphogenesis GO:0048858 244 0.022
regulation of multicellular organismal process GO:0051239 277 0.022
somite development GO:0061053 96 0.022
response to uv GO:0009411 3 0.021
protein complex disassembly GO:0043241 1 0.021
taxis GO:0042330 109 0.021
mesenchymal cell differentiation GO:0048762 87 0.021
brain development GO:0007420 293 0.021
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.021
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.021
regulation of primary metabolic process GO:0080090 311 0.021
apoptotic process GO:0006915 116 0.021
cellular protein modification process GO:0006464 100 0.021
regulation of cell cycle GO:0051726 52 0.021
negative regulation of cell communication GO:0010648 96 0.020
cardiac cell fate commitment GO:0060911 1 0.020
cellular response to starvation GO:0009267 1 0.020
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.020
stem cell division GO:0017145 1 0.020
regulation of cellular component organization GO:0051128 86 0.020
mrna metabolic process GO:0016071 20 0.020
Yeast
regulation of mrna processing GO:0050684 3 0.020
cell part morphogenesis GO:0032990 246 0.019
lamellipodium assembly GO:0030032 1 0.019
establishment of rna localization GO:0051236 3 0.019
vesicle mediated transport GO:0016192 22 0.019
positive regulation of cellular biosynthetic process GO:0031328 68 0.019
positive regulation of mrna splicing via spliceosome GO:0048026 1 0.019
regulation of erk1 and erk2 cascade GO:0070372 4 0.019
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.019
segmentation GO:0035282 97 0.018
digestive tract morphogenesis GO:0048546 231 0.018
programmed cell death GO:0012501 119 0.018
polarized epithelial cell differentiation GO:0030859 4 0.018
regulation of cytoplasmic transport GO:1903649 4 0.018
development of primary female sexual characteristics GO:0046545 4 0.018
primary neural tube formation GO:0014020 1 0.018
negative regulation of neural precursor cell proliferation GO:2000178 1 0.018
intracellular mrna localization GO:0008298 1 0.018
positive regulation of biosynthetic process GO:0009891 68 0.018
multi organism reproductive process GO:0044703 36 0.018
protein modification process GO:0036211 100 0.018
single organism cellular localization GO:1902580 46 0.018
chromatin modification GO:0016568 21 0.018
cellular protein catabolic process GO:0044257 4 0.018
sequestering of metal ion GO:0051238 3 0.018
cell growth GO:0016049 57 0.017
cellular response to external stimulus GO:0071496 2 0.017
single organism intracellular transport GO:1902582 25 0.017
liver development GO:0001889 96 0.017
neuron development GO:0048666 262 0.017
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.017
negative regulation of cellular component organization GO:0051129 16 0.017
negative regulation of catabolic process GO:0009895 3 0.016
regulation of establishment or maintenance of cell polarity GO:0032878 2 0.016
histone h3 k4 methylation GO:0051568 2 0.016
gamete generation GO:0007276 33 0.016
protein acylation GO:0043543 3 0.016
establishment of localization in cell GO:0051649 77 0.016
cell cycle GO:0007049 93 0.016
forebrain regionalization GO:0021871 4 0.016
spindle assembly GO:0051225 2 0.016
cytokinesis GO:0000910 3 0.016
activation of mapk activity GO:0000187 3 0.016
reproduction GO:0000003 40 0.016
Worm
microtubule organizing center organization GO:0031023 1 0.016
positive regulation of cell cycle GO:0045787 3 0.016
positive regulation of cellular metabolic process GO:0031325 94 0.016
cellular protein metabolic process GO:0044267 129 0.016
cell aging GO:0007569 2 0.016
mitotic cell cycle GO:0000278 64 0.016
autophagy GO:0006914 4 0.015
positive regulation of jnk cascade GO:0046330 3 0.015
chordate embryonic development GO:0043009 271 0.015
lamellipodium organization GO:0097581 1 0.015
regulation of cellular protein catabolic process GO:1903362 1 0.015
establishment or maintenance of monopolar cell polarity GO:0061339 2 0.015
nuclear transcribed mrna catabolic process GO:0000956 4 0.015
neuron projection development GO:0031175 180 0.015
somatic stem cell maintenance GO:0035019 1 0.015
cell fate commitment GO:0045165 99 0.015
single organism transport GO:0044765 206 0.015
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.015
cytoskeleton organization GO:0007010 96 0.015
death GO:0016265 121 0.015
negative regulation of dna metabolic process GO:0051053 4 0.015
eye development GO:0001654 277 0.014
enzyme linked receptor protein signaling pathway GO:0007167 106 0.014
translational initiation GO:0006413 3 0.014
locomotor rhythm GO:0045475 3 0.014
regulation of localization GO:0032879 104 0.014
dna metabolic process GO:0006259 27 0.014
regulation of growth GO:0040008 42 0.014
positive regulation of macromolecule metabolic process GO:0010604 93 0.014
positive regulation of transcription dna templated GO:0045893 57 0.014
negative regulation of protein kinase activity GO:0006469 4 0.014
regulation of establishment of planar polarity GO:0090175 4 0.014
centrosome organization GO:0051297 1 0.014
neuron projection guidance GO:0097485 86 0.014
regulation of intracellular protein transport GO:0033157 3 0.014
mrna polyadenylation GO:0006378 2 0.014
Yeast
protein acetylation GO:0006473 2 0.014
positive regulation of stress activated mapk cascade GO:0032874 3 0.014
macroautophagy GO:0016236 1 0.014
mitotic cell cycle process GO:1903047 48 0.014
response to organic substance GO:0010033 153 0.014
stem cell differentiation GO:0048863 117 0.014
cellular response to extracellular stimulus GO:0031668 2 0.014
cell cell signaling GO:0007267 52 0.014
lipid storage GO:0019915 1 0.014
regulation of wnt signaling pathway GO:0030111 53 0.013
organonitrogen compound metabolic process GO:1901564 74 0.013
establishment of epithelial cell polarity GO:0090162 2 0.013
negative regulation of translation GO:0017148 1 0.013
establishment of organelle localization GO:0051656 45 0.013
synaptic target recognition GO:0008039 1 0.013
cellular component assembly GO:0022607 170 0.013
regulation of developmental growth GO:0048638 38 0.013
meiosis i GO:0007127 1 0.013
negative chemotaxis GO:0050919 1 0.013
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.013
cellular macromolecule localization GO:0070727 21 0.013
regulation of cellular protein metabolic process GO:0032268 52 0.013
negative regulation of signaling GO:0023057 96 0.013
establishment of monopolar cell polarity GO:0061162 2 0.013
telomere organization GO:0032200 1 0.013
cellular response to endogenous stimulus GO:0071495 68 0.013
Yeast
positive regulation of developmental process GO:0051094 50 0.013
tube closure GO:0060606 1 0.013
regulation of mitotic cell cycle embryonic GO:0009794 2 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
gland development GO:0048732 143 0.013
positive regulation of cellular catabolic process GO:0031331 3 0.013
cellular response to chemical stimulus GO:0070887 157 0.012
sensory organ development GO:0007423 393 0.012
membrane invagination GO:0010324 1 0.012
germ cell development GO:0007281 22 0.012
regulation of protein ubiquitination GO:0031396 3 0.012
regulation of histone methylation GO:0031060 3 0.012
digestive system development GO:0055123 289 0.012
regulation of microtubule cytoskeleton organization GO:0070507 3 0.012
wnt signaling pathway planar cell polarity pathway GO:0060071 4 0.012
regulation of response to stimulus GO:0048583 269 0.012
system process GO:0003008 185 0.012
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.012
alternative mrna splicing via spliceosome GO:0000380 1 0.012
response to abiotic stimulus GO:0009628 122 0.012
smoothened signaling pathway GO:0007224 30 0.012
cellular macromolecular complex assembly GO:0034622 24 0.012
behavior GO:0007610 74 0.012
positive regulation of mrna metabolic process GO:1903313 2 0.012
cell cycle process GO:0022402 53 0.012
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 42 0.012
establishment of mitotic spindle orientation GO:0000132 10 0.012
cilium movement GO:0003341 26 0.012
extrinsic apoptotic signaling pathway GO:0097191 3 0.012
negative regulation of metabolic process GO:0009892 86 0.012
reproductive process GO:0022414 40 0.012
negative regulation of biosynthetic process GO:0009890 55 0.012
multi organism process GO:0051704 134 0.012
spindle localization GO:0051653 12 0.012
multicellular organismal reproductive process GO:0048609 35 0.011
negative regulation of macromolecule metabolic process GO:0010605 76 0.011
phosphorylation GO:0016310 69 0.011
regulation of mrna splicing via spliceosome GO:0048024 3 0.011
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.011
tissue remodeling GO:0048771 4 0.011
neuron projection morphogenesis GO:0048812 161 0.011
negative regulation of cellular metabolic process GO:0031324 77 0.011
negative regulation of cell cycle process GO:0010948 9 0.011
regulation of protein complex assembly GO:0043254 3 0.011
negative regulation of innate immune response GO:0045824 2 0.011
regulation of cell migration GO:0030334 40 0.011
meiosis ii GO:0007135 1 0.011
positive regulation of neural precursor cell proliferation GO:2000179 1 0.011
macromolecule localization GO:0033036 54 0.011
ameboidal type cell migration GO:0001667 143 0.011
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.011
negative regulation of rna biosynthetic process GO:1902679 45 0.011
regulation of cell motility GO:2000145 46 0.011
pathway restricted smad protein phosphorylation GO:0060389 1 0.011
intracellular transport GO:0046907 32 0.011
macromolecular complex disassembly GO:0032984 1 0.011
cellular response to organic substance GO:0071310 105 0.011
tube morphogenesis GO:0035239 349 0.011
mesenchyme development GO:0060485 127 0.011
mrna transport GO:0051028 2 0.011
gastrulation GO:0007369 208 0.011
negative regulation of chromatin modification GO:1903309 1 0.011
regulation of translational initiation GO:0006446 1 0.011
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.011
cellular localization GO:0051641 97 0.011
signal transduction downstream of smoothened GO:0007227 1 0.011
positive regulation of rna metabolic process GO:0051254 59 0.011
rna export from nucleus GO:0006405 1 0.011
axonal fasciculation GO:0007413 11 0.011
peptidyl lysine methylation GO:0018022 3 0.011
hepaticobiliary system development GO:0061008 98 0.010
developmental process involved in reproduction GO:0003006 27 0.010
morphogenesis of an epithelium GO:0002009 333 0.010
positive regulation of cellular component biogenesis GO:0044089 3 0.010
positive regulation of chromosome organization GO:2001252 1 0.010
negative regulation of cellular catabolic process GO:0031330 3 0.010
regulation of cell death GO:0010941 103 0.010
phagocytosis engulfment GO:0006911 1 0.010
cell cycle arrest GO:0007050 1 0.010
male meiosis GO:0007140 2 0.010
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.010
cell substrate junction assembly GO:0007044 2 0.010
heart field specification GO:0003128 1 0.010
regulation of smoothened signaling pathway GO:0008589 18 0.010
positive regulation of glucose transport GO:0010828 1 0.010
response to growth factor GO:0070848 39 0.010
endocytosis GO:0006897 16 0.010
negative regulation of cell fate commitment GO:0010454 13 0.010
negative regulation of myeloid cell differentiation GO:0045638 1 0.010
cell cycle checkpoint GO:0000075 7 0.010
peptidyl lysine trimethylation GO:0018023 1 0.010
somitogenesis GO:0001756 87 0.010
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.010
heart morphogenesis GO:0003007 156 0.010

cstf3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.025
myopathy DOID:423 0 0.021
muscular disease DOID:0080000 0 0.021
musculoskeletal system disease DOID:17 0 0.021
muscle tissue disease DOID:66 0 0.021
nervous system disease DOID:863 0 0.013