Danio rerio

0 known processes

hmgn3

high mobility group nucleosomal binding domain 3

(Aliases: trip7,fa04b03,wu:fa04b03,zgc:92355)

hmgn3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
protein modification process GO:0036211 100 0.143
organelle organization GO:0006996 227 0.130
regulation of macromolecule metabolic process GO:0060255 317 0.116
Mouse
macromolecule modification GO:0043412 111 0.116
internal protein amino acid acetylation GO:0006475 2 0.106
regulation of cellular metabolic process GO:0031323 320 0.100
Mouse
aging GO:0007568 2 0.096
cellular protein modification process GO:0006464 100 0.090
regulation of biological quality GO:0065008 263 0.089
Mouse
positive regulation of protein complex assembly GO:0031334 2 0.084
protein acetylation GO:0006473 2 0.076
meiotic nuclear division GO:0007126 4 0.076
nuclear transport GO:0051169 4 0.075
regulation of metabolic process GO:0019222 359 0.073
Mouse
negative regulation of biological process GO:0048519 304 0.067
internal peptidyl lysine acetylation GO:0018393 2 0.065
regulation of cell projection assembly GO:0060491 4 0.062
protein acylation GO:0043543 3 0.061
larval development GO:0002164 2 0.061
protein metabolic process GO:0019538 183 0.059
regulation of metal ion transport GO:0010959 4 0.057
cellular protein metabolic process GO:0044267 129 0.056
positive regulation of cell cycle GO:0045787 3 0.054
nucleocytoplasmic transport GO:0006913 4 0.051
signal transduction GO:0007165 455 0.047
peptidyl lysine acetylation GO:0018394 2 0.047
regulation of ion transmembrane transporter activity GO:0032412 2 0.046
protein localization to nucleus GO:0034504 3 0.046
posterior lateral line system development GO:0048915 46 0.045
cellular component biogenesis GO:0044085 178 0.044
chromosome organization GO:0051276 31 0.044
positive regulation of protein polymerization GO:0032273 2 0.043
immune system process GO:0002376 241 0.043
positive regulation of cellular component biogenesis GO:0044089 3 0.043
regulation of actin filament based movement GO:1903115 1 0.043
response to stress GO:0006950 263 0.042
regulation of cell shape GO:0008360 1 0.041
regulation of nucleotide catabolic process GO:0030811 2 0.041
gtp catabolic process GO:0006184 2 0.040
single fertilization GO:0007338 3 0.040
cognition GO:0050890 1 0.040
negative regulation of cellular process GO:0048523 283 0.040
single organism nuclear import GO:1902593 3 0.039
multi organism process GO:0051704 134 0.039
stem cell proliferation GO:0072089 4 0.038
cellular macromolecule biosynthetic process GO:0034645 224 0.037
Mouse
regulation of nucleoside metabolic process GO:0009118 2 0.037
single organism organelle organization GO:1902589 199 0.036
negative regulation of chromosome organization GO:2001251 1 0.036
guanosine containing compound catabolic process GO:1901069 2 0.036
nitrogen compound metabolic process GO:0006807 319 0.035
Mouse
protein import into nucleus GO:0006606 3 0.033
response to glucose GO:0009749 3 0.033
Mouse
actin filament polymerization GO:0030041 2 0.032
regulation of muscle contraction GO:0006937 3 0.032
cellular nitrogen compound biosynthetic process GO:0044271 218 0.031
Mouse
nucleobase containing compound metabolic process GO:0006139 274 0.031
Mouse
lipid storage GO:0019915 1 0.031
cellular nitrogen compound metabolic process GO:0034641 290 0.031
Mouse
response to monosaccharide GO:0034284 3 0.031
Mouse
gene expression GO:0010467 252 0.030
Mouse
regulation of filopodium assembly GO:0051489 2 0.030
fertilization GO:0009566 3 0.030
positive regulation of transport GO:0051050 2 0.030
phagocytosis GO:0006909 3 0.029
regulation of biosynthetic process GO:0009889 250 0.028
Mouse
response to hexose GO:0009746 3 0.028
Mouse
amine metabolic process GO:0009308 2 0.028
maintenance of location GO:0051235 4 0.028
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.027
regulation of systemic arterial blood pressure GO:0003073 1 0.027
spermatid differentiation GO:0048515 2 0.027
nucleoside monophosphate catabolic process GO:0009125 4 0.027
regulation of primary metabolic process GO:0080090 311 0.026
Mouse
gtp metabolic process GO:0046039 4 0.026
regulation of cellular amine metabolic process GO:0033238 0 0.026
response to hormone GO:0009725 48 0.026
mechanosensory lateral line system development GO:0048881 49 0.026
astrocyte differentiation GO:0048708 1 0.026
cell proliferation GO:0008283 80 0.026
positive regulation of cytoskeleton organization GO:0051495 3 0.026
regulation of purine nucleotide catabolic process GO:0033121 2 0.025
intracellular signal transduction GO:0035556 85 0.025
atp catabolic process GO:0006200 4 0.025
actin filament based movement GO:0030048 1 0.025
actin polymerization or depolymerization GO:0008154 2 0.025
mitotic dna damage checkpoint GO:0044773 4 0.025
response to drug GO:0042493 3 0.025
central nervous system development GO:0007417 387 0.025
regulation of reproductive process GO:2000241 4 0.025
regulation of protein transport GO:0051223 3 0.024
cellular amine metabolic process GO:0044106 2 0.024
cellular localization GO:0051641 97 0.024
Mouse
regulation of cytoplasmic transport GO:1903649 4 0.024
regulation of gtp catabolic process GO:0033124 2 0.024
system process GO:0003008 185 0.024
stem cell maintenance GO:0019827 4 0.024
regulation of cellular amino acid metabolic process GO:0006521 0 0.024
protein stabilization GO:0050821 2 0.024
cytokinesis GO:0000910 3 0.023
immune system development GO:0002520 191 0.023
positive regulation of nucleotide catabolic process GO:0030813 1 0.023
cellular ketone metabolic process GO:0042180 11 0.023
regulation of protein complex assembly GO:0043254 3 0.023
regulation of intracellular protein transport GO:0033157 3 0.023
cellular macromolecule metabolic process GO:0044260 391 0.023
Mouse
regulation of striated muscle contraction GO:0006942 2 0.023
response to glucocorticoid GO:0051384 1 0.023
positive regulation of secretion by cell GO:1903532 1 0.022
neuronal action potential GO:0019228 18 0.022
regulation of transporter activity GO:0032409 2 0.022
phosphorus metabolic process GO:0006793 109 0.022
guanosine containing compound metabolic process GO:1901068 4 0.022
lateral inhibition GO:0046331 1 0.022
somatic muscle development GO:0007525 4 0.022
growth GO:0040007 174 0.022
regulation of cellular component movement GO:0051270 55 0.022
aorta development GO:0035904 4 0.022
cilium morphogenesis GO:0060271 85 0.022
regulation of rna biosynthetic process GO:2001141 213 0.021
Mouse
regulation of cell activation GO:0050865 1 0.021
specification of axis polarity GO:0065001 4 0.021
covalent chromatin modification GO:0016569 20 0.021
release of sequestered calcium ion into cytosol GO:0051209 3 0.021
spermatid development GO:0007286 2 0.021
generation of neurons GO:0048699 385 0.021
regulation of establishment of protein localization GO:0070201 4 0.021
regulation of multicellular organism growth GO:0040014 4 0.021
morphogenesis of an epithelium GO:0002009 333 0.021
positive regulation of nucleoside metabolic process GO:0045979 1 0.021
regulation of cytokine production GO:0001817 3 0.021
hormone transport GO:0009914 2 0.020
Mouse
organic substance biosynthetic process GO:1901576 289 0.020
Mouse
cytoskeleton organization GO:0007010 96 0.020
regulation of gtpase activity GO:0043087 2 0.020
death GO:0016265 121 0.020
response to corticosteroid GO:0031960 1 0.020
regulation of cardiac muscle contraction GO:0055117 2 0.020
positive regulation of cellular amine metabolic process GO:0033240 0 0.020
negative regulation of catabolic process GO:0009895 3 0.020
photoreceptor cell fate commitment GO:0046552 1 0.020
positive regulation of biological process GO:0048518 253 0.020
Mouse
mitotic dna integrity checkpoint GO:0044774 4 0.020
development of primary female sexual characteristics GO:0046545 4 0.020
regulation of blood pressure GO:0008217 1 0.020
nuclear import GO:0051170 3 0.020
regulation of epithelial cell proliferation GO:0050678 3 0.020
regulation of binding GO:0051098 3 0.019
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.019
head development GO:0060322 303 0.019
rna localization GO:0006403 4 0.019
muscle cell differentiation GO:0042692 139 0.019
regulation of protein polymerization GO:0032271 2 0.019
ameboidal type cell migration GO:0001667 143 0.019
regulation of cellular ketone metabolic process GO:0010565 7 0.019
positive regulation of muscle cell differentiation GO:0051149 1 0.019
protein targeting to nucleus GO:0044744 3 0.019
posterior lateral line development GO:0048916 38 0.019
cellular component movement GO:0006928 335 0.018
cellular monovalent inorganic cation homeostasis GO:0030004 2 0.018
proteasomal protein catabolic process GO:0010498 2 0.018
single organism localization GO:1902578 225 0.018
Mouse
b cell activation GO:0042113 2 0.018
erk1 and erk2 cascade GO:0070371 4 0.018
response to carbohydrate GO:0009743 3 0.018
Mouse
female gonad development GO:0008585 4 0.018
extrinsic apoptotic signaling pathway GO:0097191 3 0.018
response to chemical GO:0042221 320 0.018
Mouse
phosphorylation GO:0016310 69 0.018
heart process GO:0003015 71 0.018
organonitrogen compound metabolic process GO:1901564 74 0.018
circulatory system process GO:0003013 87 0.018
regulation of calcium ion transport GO:0051924 2 0.018
limb bud formation GO:0060174 2 0.018
positive regulation of cellular catabolic process GO:0031331 3 0.018
meiotic cell cycle process GO:1903046 3 0.018
protein polyubiquitination GO:0000209 4 0.018
protein complex subunit organization GO:0071822 46 0.018
protein localization to plasma membrane GO:0072659 1 0.017
homeostatic process GO:0042592 142 0.017
Mouse
positive regulation of stem cell proliferation GO:2000648 1 0.017
nucleic acid transport GO:0050657 2 0.017
negative regulation of chromatin modification GO:1903309 1 0.017
mononuclear cell proliferation GO:0032943 1 0.017
cellular component disassembly GO:0022411 1 0.017
chemosensory behavior GO:0007635 1 0.017
chordate embryonic development GO:0043009 271 0.017
peptide transport GO:0015833 1 0.017
Mouse
regulation of signaling GO:0023051 235 0.017
Mouse
female sex differentiation GO:0046660 4 0.017
positive regulation of secretion GO:0051047 1 0.017
negative regulation of protein phosphorylation GO:0001933 4 0.017
regulation of purine nucleotide metabolic process GO:1900542 17 0.016
positive regulation of immune effector process GO:0002699 3 0.016
cell morphogenesis GO:0000902 289 0.016
regulation of catalytic activity GO:0050790 55 0.016
neuroblast proliferation GO:0007405 2 0.016
phagocytosis engulfment GO:0006911 1 0.016
ribonucleoside monophosphate catabolic process GO:0009158 4 0.016
embryonic organ development GO:0048568 381 0.016
regulation of intracellular ph GO:0051453 1 0.016
regulation of nucleocytoplasmic transport GO:0046822 2 0.016
purine nucleoside monophosphate catabolic process GO:0009128 4 0.016
regulation of signal transduction GO:0009966 225 0.016
nuclear migration GO:0007097 3 0.016
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.016
regulation of rho protein signal transduction GO:0035023 2 0.016
cellular response to external stimulus GO:0071496 2 0.016
rna transport GO:0050658 2 0.016
negative regulation of multicellular organismal process GO:0051241 69 0.016
regulation of erk1 and erk2 cascade GO:0070372 4 0.016
phosphate containing compound metabolic process GO:0006796 108 0.016
protein polymerization GO:0051258 4 0.016
positive regulation of translation GO:0045727 1 0.016
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.015
smooth muscle contraction GO:0006939 2 0.015
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.015
actin filament based process GO:0030029 64 0.015
regulation of mrna splicing via spliceosome GO:0048024 3 0.015
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.015
cellular component assembly GO:0022607 170 0.015
negative regulation of cellular catabolic process GO:0031330 3 0.015
multicellular organismal metabolic process GO:0044236 2 0.015
double strand break repair GO:0006302 3 0.015
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.015
Mouse
regulation of myotube differentiation GO:0010830 2 0.015
brain development GO:0007420 293 0.015
single organism metabolic process GO:0044710 217 0.015
sequestering of metal ion GO:0051238 3 0.015
digestive system development GO:0055123 289 0.015
negative regulation of cytokine production GO:0001818 1 0.015
cellular protein catabolic process GO:0044257 4 0.015
regulation of nucleotide biosynthetic process GO:0030808 15 0.015
ph reduction GO:0045851 1 0.015
leukocyte proliferation GO:0070661 1 0.014
oocyte anterior posterior axis specification GO:0007314 4 0.014
cell projection organization GO:0030030 284 0.014
immune response GO:0006955 28 0.014
regulation of cardiac muscle cell contraction GO:0086004 1 0.014
response to external stimulus GO:0009605 264 0.014
negative regulation of leukocyte differentiation GO:1902106 1 0.014
autophagy GO:0006914 4 0.014
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.014
actin cytoskeleton organization GO:0030036 63 0.014
lymphocyte proliferation GO:0046651 1 0.014
protein import GO:0017038 3 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
Mouse
anterior posterior pattern specification GO:0009952 152 0.014
membrane invagination GO:0010324 1 0.014
epidermis morphogenesis GO:0048730 4 0.014
alternative mrna splicing via spliceosome GO:0000380 1 0.014
regulation of ph GO:0006885 3 0.014
heart contraction GO:0060047 71 0.014
cell projection assembly GO:0030031 64 0.014
positive regulation of striated muscle cell differentiation GO:0051155 1 0.014
inorganic cation transmembrane transport GO:0098662 50 0.014
protein dephosphorylation GO:0006470 3 0.013
cell projection morphogenesis GO:0048858 244 0.013
antimicrobial humoral response GO:0019730 2 0.013
regulation of transmembrane transporter activity GO:0022898 2 0.013
positive regulation of carbohydrate metabolic process GO:0045913 1 0.013
biological adhesion GO:0022610 40 0.013
sensory system development GO:0048880 76 0.013
regulation of cell death GO:0010941 103 0.013
cytoskeleton dependent cytokinesis GO:0061640 3 0.013
multicellular organism growth GO:0035264 4 0.013
cation transport GO:0006812 81 0.013
aromatic compound catabolic process GO:0019439 15 0.013
pronuclear migration GO:0035046 1 0.013
positive regulation of reproductive process GO:2000243 2 0.013
inositol lipid mediated signaling GO:0048017 2 0.013
sleep GO:0030431 1 0.013
positive regulation of multi organism process GO:0043902 3 0.013
ovulation cycle process GO:0022602 2 0.013
regulation of immune system process GO:0002682 34 0.013
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.013
production of molecular mediator of immune response GO:0002440 2 0.013
cytoplasm organization GO:0007028 4 0.013
pancreas development GO:0031016 84 0.013
regulation of multicellular organismal process GO:0051239 277 0.013
histone modification GO:0016570 20 0.013
regulation of production of molecular mediator of immune response GO:0002700 1 0.013
establishment of rna localization GO:0051236 3 0.013
epithelial cell differentiation GO:0030855 116 0.012
cellular component morphogenesis GO:0032989 336 0.012
macrophage differentiation GO:0030225 7 0.012
actin mediated cell contraction GO:0070252 1 0.012
positive regulation of cell activation GO:0050867 1 0.012
localization of cell GO:0051674 244 0.012
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.012
cell cycle arrest GO:0007050 1 0.012
regulation of response to biotic stimulus GO:0002831 2 0.012
b cell differentiation GO:0030183 1 0.012
axon development GO:0061564 166 0.012
eye development GO:0001654 277 0.012
heart valve development GO:0003170 14 0.012
regulation of cell communication GO:0010646 232 0.012
Mouse
regulation of developmental process GO:0050793 247 0.012
regulation of autophagy GO:0010506 3 0.012
regulation of nucleotide metabolic process GO:0006140 17 0.012
establishment of localization GO:0051234 244 0.012
Mouse
regulation of inflammatory response GO:0050727 2 0.012
protein modification by small protein removal GO:0070646 1 0.012
microtubule organizing center organization GO:0031023 1 0.012
regulation of hormone secretion GO:0046883 2 0.012
Mouse
extrinsic apoptotic signaling pathway in absence of ligand GO:0097192 1 0.012
keratinocyte differentiation GO:0030216 0 0.011
response to endogenous stimulus GO:0009719 83 0.011
cell surface receptor signaling pathway GO:0007166 325 0.011
signal transduction in absence of ligand GO:0038034 1 0.011
regulation of cellular biosynthetic process GO:0031326 245 0.011
Mouse
cellular response to dna damage stimulus GO:0006974 24 0.011
actin filament organization GO:0007015 15 0.011
establishment of protein localization to organelle GO:0072594 4 0.011
modification dependent macromolecule catabolic process GO:0043632 3 0.011
cell cycle GO:0007049 93 0.011
negative regulation of gliogenesis GO:0014014 1 0.011
nucleic acid metabolic process GO:0090304 244 0.011
Mouse
stem cell division GO:0017145 1 0.011
positive regulation of endothelial cell migration GO:0010595 2 0.011
negative regulation of protein complex assembly GO:0031333 1 0.011
regulation of ion transmembrane transport GO:0034765 18 0.011
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.011
ubiquitin dependent protein catabolic process GO:0006511 3 0.011
carboxylic acid metabolic process GO:0019752 22 0.011
heterocycle biosynthetic process GO:0018130 215 0.011
Mouse
regulation of cardiac muscle tissue development GO:0055024 1 0.011
positive regulation of leukocyte chemotaxis GO:0002690 1 0.011
negative regulation of epithelial cell proliferation GO:0050680 1 0.011
phosphatidylinositol 3 kinase signaling GO:0014065 2 0.011
regulation of multicellular organismal development GO:2000026 223 0.011
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.011
regulation of endothelial cell proliferation GO:0001936 1 0.011
germ line stem cell maintenance GO:0030718 2 0.011
blood circulation GO:0008015 87 0.011
regulation of sequestering of calcium ion GO:0051282 4 0.011
aorta morphogenesis GO:0035909 3 0.011
regulation of skeletal muscle tissue development GO:0048641 4 0.011
transcription from rna polymerase ii promoter GO:0006366 80 0.011
Mouse
thermosensory behavior GO:0040040 1 0.011
positive regulation of molecular function GO:0044093 33 0.011
Mouse
response to nutrient GO:0007584 3 0.011
cell migration GO:0016477 237 0.011
regulation of cellular component organization GO:0051128 86 0.011
regulation of anatomical structure morphogenesis GO:0022603 130 0.011
programmed cell death GO:0012501 119 0.011
ion transport GO:0006811 114 0.010
regulation of protein ubiquitination GO:0031396 3 0.010
trabecula morphogenesis GO:0061383 2 0.010
heart development GO:0007507 313 0.010
glial cell migration GO:0008347 3 0.010
negative regulation of metabolic process GO:0009892 86 0.010
central nervous system neuron differentiation GO:0021953 74 0.010
protein targeting to membrane GO:0006612 1 0.010
negative regulation of intracellular transport GO:0032387 3 0.010
cellular amino acid metabolic process GO:0006520 7 0.010
regulation of reactive oxygen species metabolic process GO:2000377 2 0.010
camera type eye development GO:0043010 222 0.010
dna templated transcription initiation GO:0006352 1 0.010
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.010
negative regulation of defense response GO:0031348 2 0.010
regulation of neural precursor cell proliferation GO:2000177 3 0.010
transport GO:0006810 220 0.010
Mouse
locomotion GO:0040011 313 0.010
positive regulation of gtp catabolic process GO:0033126 1 0.010
single organism transport GO:0044765 206 0.010
Mouse
cellular response to oxygen levels GO:0071453 1 0.010
cellular response to decreased oxygen levels GO:0036294 1 0.010

hmgn3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.013
bone disease DOID:0080001 0 0.013
musculoskeletal system disease DOID:17 0 0.013
connective tissue disease DOID:65 0 0.013
disease of cellular proliferation DOID:14566 0 0.011
cancer DOID:162 0 0.011