Danio rerio

0 known processes

hnrnpm

heterogeneous nuclear ribonucleoprotein M

(Aliases: wu:fa10g07,wu:fa98b02,si:ch211-197g15.1)

hnrnpm biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.588
regulation of mrna processing GO:0050684 3 0.515
rna biosynthetic process GO:0032774 181 0.465
organic cyclic compound biosynthetic process GO:1901362 223 0.461
regulation of mrna splicing via spliceosome GO:0048024 3 0.430
alternative mrna splicing via spliceosome GO:0000380 1 0.312
Human
negative regulation of rna splicing GO:0033119 1 0.285
nucleic acid metabolic process GO:0090304 244 0.268
Human
embryo development ending in birth or egg hatching GO:0009792 271 0.194
regulation of transcription dna templated GO:0006355 213 0.188
larval development GO:0002164 2 0.181
positive regulation of biological process GO:0048518 253 0.174
cellular macromolecule metabolic process GO:0044260 391 0.161
Human
nucleobase containing compound biosynthetic process GO:0034654 205 0.161
heterocycle biosynthetic process GO:0018130 215 0.160
cellular biosynthetic process GO:0044249 286 0.154
regulation of nitrogen compound metabolic process GO:0051171 251 0.152
regulation of nucleic acid templated transcription GO:1903506 213 0.150
regulation of biosynthetic process GO:0009889 250 0.148
rna processing GO:0006396 25 0.148
Human
aromatic compound biosynthetic process GO:0019438 217 0.143
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.132
regulation of meiotic cell cycle GO:0051445 1 0.129
cellular nitrogen compound metabolic process GO:0034641 290 0.128
Human
nucleic acid templated transcription GO:0097659 181 0.121
regulation of rna metabolic process GO:0051252 224 0.116
aging GO:0007568 2 0.116
nitrogen compound metabolic process GO:0006807 319 0.116
Human
regulation of metabolic process GO:0019222 359 0.113
regulation of gene expression GO:0010468 265 0.105
rna metabolic process GO:0016070 219 0.102
Human
transcription dna templated GO:0006351 181 0.099
regulation of macromolecule biosynthetic process GO:0010556 225 0.098
neuron development GO:0048666 262 0.091
organic substance biosynthetic process GO:1901576 289 0.091
regulation of cellular metabolic process GO:0031323 320 0.091
regulation of primary metabolic process GO:0080090 311 0.090
maintenance of location GO:0051235 4 0.089
signal transduction GO:0007165 455 0.089
cellular nitrogen compound biosynthetic process GO:0044271 218 0.087
positive regulation of cellular process GO:0048522 201 0.086
positive regulation of metabolic process GO:0009893 108 0.085
regulation of cellular biosynthetic process GO:0031326 245 0.084
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.082
positive regulation of macromolecule metabolic process GO:0010604 93 0.080
organelle organization GO:0006996 227 0.077
cellular aromatic compound metabolic process GO:0006725 295 0.076
Human
gene expression GO:0010467 252 0.075
Human
intracellular estrogen receptor signaling pathway GO:0030520 3 0.074
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.070
nucleobase containing compound metabolic process GO:0006139 274 0.068
Human
regulation of synapse organization GO:0050807 3 0.068
regulation of macromolecule metabolic process GO:0060255 317 0.066
stem cell maintenance GO:0019827 4 0.065
regulation of mrna metabolic process GO:1903311 6 0.064
spliceosomal complex assembly GO:0000245 1 0.062
biosynthetic process GO:0009058 294 0.062
organic cyclic compound metabolic process GO:1901360 301 0.061
Human
heterocycle metabolic process GO:0046483 290 0.059
Human
sex determination GO:0007530 1 0.059
regulation of rna splicing GO:0043484 8 0.059
immune system development GO:0002520 191 0.058
regulation of rna biosynthetic process GO:2001141 213 0.058
locomotor rhythm GO:0045475 3 0.058
cellular component biogenesis GO:0044085 178 0.058
cellular macromolecule biosynthetic process GO:0034645 224 0.057
cell substrate junction assembly GO:0007044 2 0.057
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.055
protein metabolic process GO:0019538 183 0.055
mrna splicing via spliceosome GO:0000398 10 0.053
Human
positive regulation of gene expression GO:0010628 71 0.052
protein acetylation GO:0006473 2 0.052
positive regulation of cellular biosynthetic process GO:0031328 68 0.051
negative regulation of mitosis GO:0045839 3 0.051
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.049
growth GO:0040007 174 0.049
amine metabolic process GO:0009308 2 0.048
negative regulation of mrna metabolic process GO:1903312 3 0.048
neuronal stem cell maintenance GO:0097150 2 0.045
macromolecule biosynthetic process GO:0009059 227 0.045
synaptic growth at neuromuscular junction GO:0051124 2 0.044
positive regulation of cellular metabolic process GO:0031325 94 0.044
adult behavior GO:0030534 2 0.044
negative regulation of metabolic process GO:0009892 86 0.044
lipid storage GO:0019915 1 0.044
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.043
Human
single organism organelle organization GO:1902589 199 0.043
internal peptidyl lysine acetylation GO:0018393 2 0.043
mrna processing GO:0006397 14 0.043
Human
positive regulation of cellular component biogenesis GO:0044089 3 0.042
positive regulation of nucleic acid templated transcription GO:1903508 57 0.042
neuron differentiation GO:0030182 353 0.042
cell projection organization GO:0030030 284 0.041
stem cell development GO:0048864 82 0.040
positive regulation of transcription from rna polymerase ii promoter GO:0045944 22 0.040
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.039
cellular component assembly GO:0022607 170 0.038
meiotic nuclear division GO:0007126 4 0.038
regulation of biological quality GO:0065008 263 0.038
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.038
oocyte anterior posterior axis specification GO:0007314 4 0.037
negative regulation of nuclear division GO:0051784 3 0.036
dsrna fragmentation GO:0031050 1 0.034
organism emergence from protective structure GO:0071684 4 0.034
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.033
multi organism cellular process GO:0044764 2 0.033
positive regulation of rna metabolic process GO:0051254 59 0.032
positive regulation of transcription dna templated GO:0045893 57 0.032
regulation of cell communication GO:0010646 232 0.032
establishment of protein localization to organelle GO:0072594 4 0.032
mrna metabolic process GO:0016071 20 0.032
Human
viral process GO:0016032 1 0.032
rna splicing GO:0008380 16 0.032
Human
maternal determination of anterior posterior axis embryo GO:0008358 4 0.032
cell cycle process GO:0022402 53 0.032
positive regulation of rna biosynthetic process GO:1902680 57 0.031
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.031
negative regulation of cellular process GO:0048523 283 0.031
positive regulation of ras protein signal transduction GO:0046579 1 0.031
positive regulation of biosynthetic process GO:0009891 68 0.030
regulation of multicellular organism growth GO:0040014 4 0.030
developmental growth GO:0048589 166 0.030
negative regulation of gene expression GO:0010629 65 0.029
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.029
positive regulation of rna splicing GO:0033120 1 0.029
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.029
positive regulation of cell cycle GO:0045787 3 0.028
macromolecule methylation GO:0043414 19 0.028
regulation of protein complex disassembly GO:0043244 1 0.027
immune system process GO:0002376 241 0.027
internal protein amino acid acetylation GO:0006475 2 0.027
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.026
phagocytosis GO:0006909 3 0.026
chordate embryonic development GO:0043009 271 0.026
negative regulation of biological process GO:0048519 304 0.025
multicellular organism growth GO:0035264 4 0.025
establishment of localization GO:0051234 244 0.025
dendrite guidance GO:0070983 0 0.025
response to external stimulus GO:0009605 264 0.025
regeneration GO:0031099 91 0.025
positive regulation of mrna metabolic process GO:1903313 2 0.025
regulation of cytoplasmic transport GO:1903649 4 0.025
positive regulation of synapse assembly GO:0051965 1 0.025
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.024
regulation of response to oxidative stress GO:1902882 2 0.024
embryonic organ development GO:0048568 381 0.024
stem cell differentiation GO:0048863 117 0.024
regulation of multicellular organismal process GO:0051239 277 0.024
nucleocytoplasmic transport GO:0006913 4 0.024
cell morphogenesis GO:0000902 289 0.024
regulation of protein catabolic process GO:0042176 1 0.024
regulation of synapse assembly GO:0051963 3 0.023
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.023
negative regulation of macromolecule metabolic process GO:0010605 76 0.023
blood vessel development GO:0001568 246 0.023
generation of neurons GO:0048699 385 0.023
regulation of cellular response to oxidative stress GO:1900407 2 0.023
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.022
rna polyadenylation GO:0043631 2 0.022
rna modification GO:0009451 2 0.022
cellular localization GO:0051641 97 0.022
positive regulation of mrna splicing via spliceosome GO:0048026 1 0.022
regulation of protein complex assembly GO:0043254 3 0.022
regulation of erk1 and erk2 cascade GO:0070372 4 0.022
gene silencing by mirna GO:0035195 3 0.022
positive regulation of cell activation GO:0050867 1 0.021
intracellular signal transduction GO:0035556 85 0.021
locomotion GO:0040011 313 0.021
hemopoiesis GO:0030097 183 0.021
development of primary female sexual characteristics GO:0046545 4 0.021
multicellular organismal reproductive process GO:0048609 35 0.021
regulation of protein metabolic process GO:0051246 56 0.021
hematopoietic or lymphoid organ development GO:0048534 191 0.021
protein acylation GO:0043543 3 0.021
anterior posterior pattern specification GO:0009952 152 0.021
single organism metabolic process GO:0044710 217 0.020
regulation of cellular amino acid metabolic process GO:0006521 0 0.020
intracellular steroid hormone receptor signaling pathway GO:0030518 5 0.020
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.020
regulation of cellular amine metabolic process GO:0033238 0 0.020
modification of morphology or physiology of other organism involved in symbiotic interaction GO:0051817 4 0.020
spermatid differentiation GO:0048515 2 0.019
nuclear transport GO:0051169 4 0.019
germ line stem cell maintenance GO:0030718 2 0.019
regulation of gene expression epigenetic GO:0040029 11 0.019
dna templated transcription elongation GO:0006354 3 0.019
negative regulation of dna replication GO:0008156 2 0.019
response to chemical GO:0042221 320 0.019
erk1 and erk2 cascade GO:0070371 4 0.019
regulation of signaling GO:0023051 235 0.019
regulation of cell activation GO:0050865 1 0.018
cytokinesis GO:0000910 3 0.018
histone deacetylation GO:0016575 2 0.018
eye development GO:0001654 277 0.018
cell death in response to oxidative stress GO:0036473 2 0.018
response to drug GO:0042493 3 0.018
cellular biogenic amine metabolic process GO:0006576 2 0.018
germ cell development GO:0007281 22 0.018
positive regulation of dna templated transcription elongation GO:0032786 1 0.018
single organism nuclear import GO:1902593 3 0.018
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.018
rna export from nucleus GO:0006405 1 0.018
protein localization to nucleus GO:0034504 3 0.018
transcription from rna polymerase ii promoter GO:0006366 80 0.018
mrna stabilization GO:0048255 4 0.018
response to wounding GO:0009611 116 0.017
regulation of hematopoietic progenitor cell differentiation GO:1901532 1 0.017
peptidyl serine modification GO:0018209 2 0.017
protein targeting to nucleus GO:0044744 3 0.017
central nervous system development GO:0007417 387 0.017
positive regulation of muscle cell differentiation GO:0051149 1 0.017
regulation of mrna catabolic process GO:0061013 3 0.017
neuroblast proliferation GO:0007405 2 0.017
3 utr mediated mrna stabilization GO:0070935 3 0.017
posttranscriptional regulation of gene expression GO:0010608 14 0.017
modification of morphology or physiology of other organism GO:0035821 4 0.017
angiogenesis GO:0001525 158 0.017
regulation of cell cycle GO:0051726 52 0.017
mitotic cell cycle process GO:1903047 48 0.017
cellular response to dsrna GO:0071359 1 0.017
regulation of cell differentiation GO:0045595 142 0.017
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.016
segmentation GO:0035282 97 0.016
cytoskeleton organization GO:0007010 96 0.016
regulation of dna replication GO:0006275 3 0.016
cell part morphogenesis GO:0032990 246 0.016
intracellular mrna localization GO:0008298 1 0.016
larval locomotory behavior GO:0008345 5 0.016
locomotory behavior GO:0007626 34 0.016
negative regulation of catabolic process GO:0009895 3 0.016
neural crest cell differentiation GO:0014033 72 0.016
regulation of cytokine production GO:0001817 3 0.016
negative regulation of rna metabolic process GO:0051253 48 0.016
dorsal ventral pattern formation GO:0009953 125 0.016
regulation of signal transduction GO:0009966 225 0.015
interspecies interaction between organisms GO:0044419 4 0.015
ras protein signal transduction GO:0007265 7 0.015
rna localization GO:0006403 4 0.015
cell cycle GO:0007049 93 0.015
protein import GO:0017038 3 0.015
cellular amine metabolic process GO:0044106 2 0.015
positive regulation of histone modification GO:0031058 1 0.015
positive regulation of mrna processing GO:0050685 1 0.015
positive regulation of stem cell proliferation GO:2000648 1 0.015
regulation of dna templated transcription elongation GO:0032784 3 0.015
negative regulation of synapse assembly GO:0051964 2 0.015
circadian regulation of gene expression GO:0032922 8 0.015
regulation of cellular protein catabolic process GO:1903362 1 0.015
wound healing GO:0042060 90 0.015
epidermis development GO:0008544 48 0.015
homeostasis of number of cells GO:0048872 62 0.015
regulation of oxidative stress induced cell death GO:1903201 2 0.014
chromatin modification GO:0016568 21 0.014
multi organism process GO:0051704 134 0.014
single organism localization GO:1902578 225 0.014
small gtpase mediated signal transduction GO:0007264 8 0.014
regulation of cellular component organization GO:0051128 86 0.014
retina morphogenesis in camera type eye GO:0060042 79 0.014
oxoacid metabolic process GO:0043436 31 0.014
regulation of circadian rhythm GO:0042752 4 0.014
female gonad development GO:0008585 4 0.014
carboxylic acid metabolic process GO:0019752 22 0.014
blood vessel morphogenesis GO:0048514 216 0.014
somitogenesis GO:0001756 87 0.014
positive regulation of cellular amine metabolic process GO:0033240 0 0.014
transport GO:0006810 220 0.014
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.014
embryonic pattern specification GO:0009880 44 0.014
neuromuscular synaptic transmission GO:0007274 2 0.014
female sex differentiation GO:0046660 4 0.014
nucleic acid transport GO:0050657 2 0.014
somite development GO:0061053 96 0.014
compound eye development GO:0048749 2 0.014
peptidyl lysine acetylation GO:0018394 2 0.014
regulation of cell cycle process GO:0010564 20 0.014
protein import into nucleus GO:0006606 3 0.014
positive regulation of myeloid cell differentiation GO:0045639 2 0.014
hemidesmosome assembly GO:0031581 1 0.014
regulation of multicellular organismal development GO:2000026 223 0.014
regulation of developmental process GO:0050793 247 0.013
spermatid development GO:0007286 2 0.013
cellular ketone metabolic process GO:0042180 11 0.013
rna 3 end processing GO:0031123 2 0.013
macromolecule localization GO:0033036 54 0.013
positive regulation of cellular catabolic process GO:0031331 3 0.013
posttranscriptional gene silencing GO:0016441 3 0.013
negative regulation of signal transduction GO:0009968 94 0.013
negative regulation of developmental process GO:0051093 65 0.013
protein stabilization GO:0050821 2 0.013
nuclear import GO:0051170 3 0.013
organic acid metabolic process GO:0006082 31 0.013
circulatory system process GO:0003013 87 0.013
axis specification GO:0009798 43 0.012
meiosis i GO:0007127 1 0.012
programmed cell death GO:0012501 119 0.012
nuclear export GO:0051168 1 0.012
erythrocyte homeostasis GO:0034101 55 0.012
regulation of cellular ketone metabolic process GO:0010565 7 0.012
oogenesis GO:0048477 14 0.012
cell projection morphogenesis GO:0048858 244 0.012
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.012
cellular component morphogenesis GO:0032989 336 0.012
regulation of organelle organization GO:0033043 29 0.012
intrinsic apoptotic signaling pathway in response to oxidative stress GO:0008631 2 0.012
regulation of cell division GO:0051302 12 0.012
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 0 0.012
b cell activation GO:0042113 2 0.012
macromolecule deacylation GO:0098732 3 0.012
cellular protein metabolic process GO:0044267 129 0.012
organic substance transport GO:0071702 58 0.012
negative regulation of cellular metabolic process GO:0031324 77 0.012
negative regulation of multi organism process GO:0043901 3 0.012
cell death GO:0008219 121 0.012
response to hexose GO:0009746 3 0.012
mitotic dna integrity checkpoint GO:0044774 4 0.011
heart development GO:0007507 313 0.011
rna splicing via transesterification reactions GO:0000375 10 0.011
Human
reproduction GO:0000003 40 0.011
apoptotic process GO:0006915 116 0.011
negative regulation of myeloid cell differentiation GO:0045638 1 0.011
monocyte differentiation GO:0030224 2 0.011
cellular amino acid metabolic process GO:0006520 7 0.011
regulation of immune system process GO:0002682 34 0.011
protein complex subunit organization GO:0071822 46 0.011
regulation of stem cell proliferation GO:0072091 2 0.011
primary neural tube formation GO:0014020 1 0.011
phosphorylation GO:0016310 69 0.011
tissue remodeling GO:0048771 4 0.011
regulation of developmental growth GO:0048638 38 0.011
negative regulation of mrna processing GO:0050686 1 0.011
developmental maturation GO:0021700 34 0.011
response to organic substance GO:0010033 153 0.011
central nervous system neuron differentiation GO:0021953 74 0.011
larval behavior GO:0030537 5 0.011
regulation of nucleocytoplasmic transport GO:0046822 2 0.010
single organism transport GO:0044765 206 0.010
negative regulation of defense response GO:0031348 2 0.010
skin development GO:0043588 54 0.010
small molecule metabolic process GO:0044281 77 0.010
myeloid cell homeostasis GO:0002262 56 0.010
response to inorganic substance GO:0010035 38 0.010
regulation of dna templated transcription in response to stress GO:0043620 0 0.010
mesenchyme development GO:0060485 127 0.010

hnrnpm disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.119
motor neuron disease DOID:231 0 0.112
nervous system disease DOID:863 0 0.112
neurodegenerative disease DOID:1289 0 0.112
amyotrophic lateral sclerosis DOID:332 0 0.112
central nervous system disease DOID:331 0 0.112
cancer DOID:162 0 0.032
disease of cellular proliferation DOID:14566 0 0.032
musculoskeletal system disease DOID:17 0 0.026
organ system cancer DOID:0050686 0 0.017
muscular disease DOID:0080000 0 0.016
muscle tissue disease DOID:66 0 0.016
myopathy DOID:423 0 0.016