Danio rerio

0 known processes

id:ibd2573

id:ibd2573

id:ibd2573 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
embryonic organ morphogenesis GO:0048562 274 0.408
embryonic organ development GO:0048568 381 0.229
ameboidal type cell migration GO:0001667 143 0.179
inner ear development GO:0048839 126 0.174
organic cyclic compound biosynthetic process GO:1901362 223 0.154
Mouse Fly
positive regulation of biological process GO:0048518 253 0.149
Mouse Fly
biosynthetic process GO:0009058 294 0.139
Mouse Fly
cellular nitrogen compound metabolic process GO:0034641 290 0.138
Mouse Fly
determination of bilateral symmetry GO:0009855 204 0.118
negative regulation of cellular process GO:0048523 283 0.113
heterocycle biosynthetic process GO:0018130 215 0.108
Mouse Fly
cartilage development GO:0051216 96 0.108
organic cyclic compound metabolic process GO:1901360 301 0.103
Mouse Fly
nitrogen compound metabolic process GO:0006807 319 0.100
Mouse Fly
regulation of signaling GO:0023051 235 0.096
larval development GO:0002164 2 0.095
Fly
cellular component morphogenesis GO:0032989 336 0.093
central nervous system development GO:0007417 387 0.092
notochord development GO:0030903 54 0.090
regulation of rna metabolic process GO:0051252 224 0.089
Mouse Fly
regulation of signal transduction GO:0009966 225 0.085
brain development GO:0007420 293 0.079
enzyme linked receptor protein signaling pathway GO:0007167 106 0.075
locomotion GO:0040011 313 0.073
regionalization GO:0003002 274 0.072
Fly
gene expression GO:0010467 252 0.069
Mouse Fly
regulation of cell communication GO:0010646 232 0.068
cell motility GO:0048870 244 0.068
heart development GO:0007507 313 0.067
cellular macromolecule biosynthetic process GO:0034645 224 0.066
Mouse Fly
regulation of biosynthetic process GO:0009889 250 0.066
Mouse Fly
positive regulation of cellular process GO:0048522 201 0.065
Mouse Fly
regulation of multicellular organismal process GO:0051239 277 0.064
Mouse
specification of symmetry GO:0009799 204 0.063
aromatic compound biosynthetic process GO:0019438 217 0.061
Mouse Fly
cellular component movement GO:0006928 335 0.059
connective tissue development GO:0061448 99 0.059
chordate embryonic development GO:0043009 271 0.058
myotube differentiation GO:0014902 45 0.056
embryonic pattern specification GO:0009880 44 0.055
maintenance of location GO:0051235 4 0.054
cell surface receptor signaling pathway GO:0007166 325 0.054
vasculature development GO:0001944 278 0.053
regulation of macromolecule metabolic process GO:0060255 317 0.052
Mouse Fly
response to external stimulus GO:0009605 264 0.052
regulation of response to stimulus GO:0048583 269 0.051
protein metabolic process GO:0019538 183 0.051
protein localization to nucleus GO:0034504 3 0.051
regulation of cellular metabolic process GO:0031323 320 0.050
Mouse Fly
regulation of multicellular organismal development GO:2000026 223 0.049
Mouse
cellular biosynthetic process GO:0044249 286 0.049
Mouse Fly
cell morphogenesis involved in differentiation GO:0000904 195 0.049
wnt signaling pathway GO:0016055 80 0.049
cellular nitrogen compound biosynthetic process GO:0044271 218 0.049
Mouse Fly
cell morphogenesis GO:0000902 289 0.049
positive regulation of epithelial cell differentiation GO:0030858 2 0.048
heterocycle metabolic process GO:0046483 290 0.047
Mouse Fly
regulation of nucleic acid templated transcription GO:1903506 213 0.047
Mouse Fly
hard palate development GO:0060022 4 0.045
digestive tract morphogenesis GO:0048546 231 0.045
nucleic acid templated transcription GO:0097659 181 0.044
Mouse Fly
macromolecule biosynthetic process GO:0009059 227 0.044
Mouse Fly
regulation of metabolic process GO:0019222 359 0.044
Mouse Fly
cell projection organization GO:0030030 284 0.042
signal transduction GO:0007165 455 0.042
sensory organ development GO:0007423 393 0.041
negative regulation of cell communication GO:0010648 96 0.041
collagen metabolic process GO:0032963 2 0.041
skeletal system development GO:0001501 181 0.040
rna metabolic process GO:0016070 219 0.040
Mouse Fly
response to chemical GO:0042221 320 0.040
neuron projection morphogenesis GO:0048812 161 0.039
cell projection morphogenesis GO:0048858 244 0.039
regulation of rna biosynthetic process GO:2001141 213 0.039
Mouse Fly
tube morphogenesis GO:0035239 349 0.039
regulation of binding GO:0051098 3 0.038
transport GO:0006810 220 0.038
head development GO:0060322 303 0.038
cellular response to growth factor stimulus GO:0071363 39 0.038
lateral inhibition GO:0046331 1 0.038
axon development GO:0061564 166 0.038
regulation of developmental process GO:0050793 247 0.037
Mouse
determination of left right symmetry GO:0007368 179 0.037
regulation of cell differentiation GO:0045595 142 0.037
germ line stem cell maintenance GO:0030718 2 0.037
regulation of cellular response to growth factor stimulus GO:0090287 35 0.036
embryonic heart tube development GO:0035050 133 0.036
stem cell maintenance GO:0019827 4 0.035
cellular aromatic compound metabolic process GO:0006725 295 0.034
Mouse Fly
appendage morphogenesis GO:0035107 56 0.034
cell fate commitment GO:0045165 99 0.034
cell migration involved in gastrulation GO:0042074 79 0.034
sensory organ morphogenesis GO:0090596 200 0.033
appendage development GO:0048736 80 0.033
neuron differentiation GO:0030182 353 0.033
response to fluid shear stress GO:0034405 2 0.033
nucleobase containing compound metabolic process GO:0006139 274 0.032
Mouse Fly
regulation of nitrogen compound metabolic process GO:0051171 251 0.032
Mouse Fly
gastrulation GO:0007369 208 0.031
cell part morphogenesis GO:0032990 246 0.031
cell migration GO:0016477 237 0.031
negative regulation of response to stimulus GO:0048585 104 0.031
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.031
organic substance biosynthetic process GO:1901576 289 0.031
Mouse Fly
regulation of reproductive process GO:2000241 4 0.031
cilium morphogenesis GO:0060271 85 0.030
multicellular organismal macromolecule metabolic process GO:0044259 2 0.030
cellular protein metabolic process GO:0044267 129 0.030
skeletal system morphogenesis GO:0048705 102 0.030
regulation of multicellular organism growth GO:0040014 4 0.030
nucleic acid metabolic process GO:0090304 244 0.029
Mouse Fly
single organism localization GO:1902578 225 0.029
mononuclear cell proliferation GO:0032943 1 0.029
regulation of protein localization to nucleus GO:1900180 2 0.029
gland development GO:0048732 143 0.029
Fly
skeletal muscle tissue development GO:0007519 67 0.028
embryonic heart tube morphogenesis GO:0003143 108 0.028
eye development GO:0001654 277 0.028
organelle organization GO:0006996 227 0.028
regulation of cellular biosynthetic process GO:0031326 245 0.028
Mouse Fly
chemosensory behavior GO:0007635 1 0.028
embryo development ending in birth or egg hatching GO:0009792 271 0.027
regulation of protein catabolic process GO:0042176 1 0.027
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.027
Mouse Fly
eye morphogenesis GO:0048592 144 0.027
muscle structure development GO:0061061 196 0.027
regulation of cell development GO:0060284 100 0.027
rna biosynthetic process GO:0032774 181 0.027
Mouse Fly
transcription dna templated GO:0006351 181 0.027
Mouse Fly
establishment of protein localization to organelle GO:0072594 4 0.026
adherens junction organization GO:0034332 4 0.026
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.026
regulation of myotube differentiation GO:0010830 2 0.026
lens development in camera type eye GO:0002088 22 0.026
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.025
Mouse Fly
nucleobase containing compound biosynthetic process GO:0034654 205 0.025
Mouse Fly
dorsal ventral pattern formation GO:0009953 125 0.025
Fly
cellular component assembly involved in morphogenesis GO:0010927 107 0.025
transcription from rna polymerase ii promoter GO:0006366 80 0.025
Mouse Fly
negative regulation of signaling GO:0023057 96 0.025
cellular protein catabolic process GO:0044257 4 0.025
localization of cell GO:0051674 244 0.024
skeletal muscle fiber development GO:0048741 35 0.024
protein modification process GO:0036211 100 0.024
response to stress GO:0006950 263 0.024
embryonic skeletal joint development GO:0072498 3 0.024
positive regulation of transport GO:0051050 2 0.024
immune system process GO:0002376 241 0.024
renal system development GO:0072001 94 0.023
aging GO:0007568 2 0.023
protein import into nucleus GO:0006606 3 0.023
morphogenesis of an epithelium GO:0002009 333 0.023
forebrain development GO:0030900 96 0.023
fin development GO:0033333 77 0.023
heart jogging GO:0003146 40 0.023
digestive tract development GO:0048565 265 0.022
generation of neurons GO:0048699 385 0.022
neural crest cell differentiation GO:0014033 72 0.022
collagen biosynthetic process GO:0032964 2 0.022
urogenital system development GO:0001655 97 0.022
single organism metabolic process GO:0044710 217 0.022
response to growth factor GO:0070848 39 0.022
muscle organ development GO:0007517 101 0.022
phosphatidylinositol 3 kinase signaling GO:0014065 2 0.022
regulation of skeletal muscle fiber development GO:0048742 2 0.022
cellular macromolecule metabolic process GO:0044260 391 0.022
Mouse Fly
epithelium migration GO:0090132 25 0.022
positive regulation of cellular catabolic process GO:0031331 3 0.021
ear development GO:0043583 127 0.021
muscle cell development GO:0055001 115 0.021
response to corticosteroid GO:0031960 1 0.021
determination of heart left right asymmetry GO:0061371 117 0.021
carbohydrate derivative biosynthetic process GO:1901137 43 0.021
protein import GO:0017038 3 0.021
negative regulation of signal transduction GO:0009968 94 0.021
regulation of protein import into nucleus GO:0042306 2 0.020
nucleocytoplasmic transport GO:0006913 4 0.020
heart morphogenesis GO:0003007 156 0.020
regulation of transcription dna templated GO:0006355 213 0.020
Mouse Fly
response to vitamin GO:0033273 3 0.020
intracellular signal transduction GO:0035556 85 0.020
regulation of establishment of protein localization GO:0070201 4 0.020
regulation of synapse assembly GO:0051963 3 0.020
fin morphogenesis GO:0033334 53 0.020
negative regulation of muscle cell differentiation GO:0051148 1 0.020
positive regulation of cell adhesion GO:0045785 1 0.020
epithelial cell differentiation GO:0030855 116 0.019
regulation of bmp signaling pathway GO:0030510 39 0.019
muscle tissue development GO:0060537 110 0.019
nuclear import GO:0051170 3 0.019
cellular response to organic substance GO:0071310 105 0.019
regulation of gene expression GO:0010468 265 0.019
Mouse Fly
ubiquitin dependent protein catabolic process GO:0006511 3 0.019
digestive system development GO:0055123 289 0.019
neuron development GO:0048666 262 0.019
camera type eye development GO:0043010 222 0.018
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.018
Mouse Fly
cilium assembly GO:0042384 58 0.018
regulation of cellular amine metabolic process GO:0033238 0 0.018
bmp signaling pathway GO:0030509 52 0.018
positive regulation of catabolic process GO:0009896 4 0.018
lymphocyte proliferation GO:0046651 1 0.018
regulation of synapse organization GO:0050807 3 0.018
negative regulation of bmp signaling pathway GO:0030514 13 0.018
kidney development GO:0001822 92 0.018
tube closure GO:0060606 1 0.018
regulation of stem cell proliferation GO:0072091 2 0.017
convergent extension GO:0060026 118 0.017
cellular response to extracellular stimulus GO:0031668 2 0.017
lipid storage GO:0019915 1 0.017
canonical wnt signaling pathway GO:0060070 48 0.017
phagocytosis GO:0006909 3 0.017
regulation of protein binding GO:0043393 3 0.017
regulation of cellular amino acid metabolic process GO:0006521 0 0.017
regulation of cell activation GO:0050865 1 0.017
negative regulation of protein phosphorylation GO:0001933 4 0.017
stem cell differentiation GO:0048863 117 0.017
endoderm development GO:0007492 49 0.017
regulation of protein transport GO:0051223 3 0.017
regulation of chondrocyte differentiation GO:0032330 1 0.017
single organism organelle organization GO:1902589 199 0.017
camera type eye morphogenesis GO:0048593 108 0.016
hormone secretion GO:0046879 2 0.016
stem cell proliferation GO:0072089 4 0.016
regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090092 50 0.016
regulation of blood vessel size GO:0050880 2 0.016
cellular response to external stimulus GO:0071496 2 0.016
cellular response to chemical stimulus GO:0070887 157 0.016
axonogenesis GO:0007409 152 0.016
regulation of anatomical structure morphogenesis GO:0022603 130 0.016
regulation of cytokine production GO:0001817 3 0.016
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.016
hemopoiesis GO:0030097 183 0.016
mesenchyme development GO:0060485 127 0.016
nuclear transport GO:0051169 4 0.015
positive regulation of macromolecule metabolic process GO:0010604 93 0.015
Mouse Fly
cellular response to fibroblast growth factor stimulus GO:0044344 22 0.015
protein targeting to nucleus GO:0044744 3 0.015
phosphate containing compound metabolic process GO:0006796 108 0.015
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.015
homeostatic process GO:0042592 142 0.015
autophagy GO:0006914 4 0.015
blood vessel development GO:0001568 246 0.015
production of molecular mediator of immune response GO:0002440 2 0.015
regulation of organ growth GO:0046620 3 0.015
somite development GO:0061053 96 0.015
anterior posterior pattern specification GO:0009952 152 0.015
cilium organization GO:0044782 71 0.015
mesenchymal cell differentiation GO:0048762 87 0.015
mesoderm morphogenesis GO:0048332 51 0.014
multicellular organism growth GO:0035264 4 0.014
regulation of production of molecular mediator of immune response GO:0002700 1 0.014
response to glucocorticoid GO:0051384 1 0.014
regulation of organ morphogenesis GO:2000027 35 0.014
regulation of primary metabolic process GO:0080090 311 0.014
Mouse Fly
organelle localization GO:0051640 49 0.014
establishment of localization GO:0051234 244 0.014
hepaticobiliary system development GO:0061008 98 0.014
regulation of cartilage development GO:0061035 7 0.014
positive regulation of reproductive process GO:2000243 2 0.014
response to organic substance GO:0010033 153 0.014
modification dependent protein catabolic process GO:0019941 3 0.014
compound eye development GO:0048749 2 0.014
mesenchymal cell development GO:0014031 78 0.014
regulation of bone mineralization GO:0030500 2 0.013
Mouse
regulation of epithelial cell proliferation GO:0050678 3 0.013
embryonic skeletal system morphogenesis GO:0048704 93 0.013
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 2 0.013
gtp metabolic process GO:0046039 4 0.013
modification dependent macromolecule catabolic process GO:0043632 3 0.013
golgi vesicle transport GO:0048193 3 0.013
stem cell development GO:0048864 82 0.013
negative regulation of sequestering of calcium ion GO:0051283 4 0.013
regulation of cell death GO:0010941 103 0.013
regulation of biological quality GO:0065008 263 0.013
regulation of tube size GO:0035150 2 0.013
response to monosaccharide GO:0034284 3 0.013
regulation of epithelial to mesenchymal transition GO:0010717 3 0.013
developmental growth GO:0048589 166 0.013
central nervous system neuron differentiation GO:0021953 74 0.013
cellular protein modification process GO:0006464 100 0.013
regulation of carbohydrate metabolic process GO:0006109 4 0.013
small molecule metabolic process GO:0044281 77 0.013
epithelial cell migration GO:0010631 25 0.013
positive regulation of cell cycle GO:0045787 3 0.013
extrinsic apoptotic signaling pathway GO:0097191 3 0.013
regulation of macromolecule biosynthetic process GO:0010556 225 0.013
Mouse Fly
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
single organism nuclear import GO:1902593 3 0.013
sequestering of metal ion GO:0051238 3 0.012
optic placode formation GO:0001743 4 0.012
cellular amine metabolic process GO:0044106 2 0.012
tissue migration GO:0090130 37 0.012
taxis GO:0042330 109 0.012
phagocytosis engulfment GO:0006911 1 0.012
cell fate commitment involved in formation of primary germ layer GO:0060795 26 0.012
blood vessel morphogenesis GO:0048514 216 0.012
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.012
positive regulation of cellular component biogenesis GO:0044089 3 0.012
negative regulation of kinase activity GO:0033673 4 0.012
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.012
cellular amino acid metabolic process GO:0006520 7 0.012
membrane invagination GO:0010324 1 0.012
positive regulation of cytoskeleton organization GO:0051495 3 0.012
protein secretion GO:0009306 1 0.012
macromolecule modification GO:0043412 111 0.012
cytosolic calcium ion transport GO:0060401 3 0.012
growth GO:0040007 174 0.012
cell cell recognition GO:0009988 1 0.012
regulation of autophagy GO:0010506 3 0.012
stem cell division GO:0017145 1 0.012
phosphorylation GO:0016310 69 0.011
response to other organism GO:0051707 97 0.011
carboxylic acid metabolic process GO:0019752 22 0.011
negative regulation of biological process GO:0048519 304 0.011
odontogenesis of dentin containing tooth GO:0042475 1 0.011
hatching GO:0035188 4 0.011
positive regulation of synapse assembly GO:0051965 1 0.011
negative regulation of epithelial cell proliferation GO:0050680 1 0.011
cellular response to starvation GO:0009267 1 0.011
response to wounding GO:0009611 116 0.011
protein localization to plasma membrane GO:0072659 1 0.011
regulation of metal ion transport GO:0010959 4 0.011
hypothalamus cell differentiation GO:0021979 4 0.011
leukocyte proliferation GO:0070661 1 0.011
positive regulation of multi organism process GO:0043902 3 0.011
immunoglobulin mediated immune response GO:0016064 3 0.011
epidermal cell differentiation GO:0009913 36 0.011
establishment of organelle localization GO:0051656 45 0.011
positive regulation of cellular metabolic process GO:0031325 94 0.011
Mouse Fly
regulation of protein targeting GO:1903533 2 0.011
regulation of intracellular protein transport GO:0033157 3 0.011
negative regulation of intracellular transport GO:0032387 3 0.011
hatching gland development GO:0048785 3 0.011
cellular ketone metabolic process GO:0042180 11 0.011
superoxide metabolic process GO:0006801 2 0.011
epithelial cell development GO:0002064 42 0.011
regulation of skeletal muscle tissue development GO:0048641 4 0.011
embryonic skeletal system development GO:0048706 97 0.011
cranial nerve development GO:0021545 42 0.011
mesoderm development GO:0007498 88 0.011
wound healing GO:0042060 90 0.011
heart looping GO:0001947 94 0.011
epidermal cell fate specification GO:0009957 4 0.011
regulation of oocyte development GO:0060281 3 0.011
regulation of erk1 and erk2 cascade GO:0070372 4 0.010
regulation of dna replication GO:0006275 3 0.010
pigmentation GO:0043473 85 0.010
sensory perception of chemical stimulus GO:0007606 3 0.010
negative regulation of dna metabolic process GO:0051053 4 0.010
regulation of wnt signaling pathway GO:0030111 53 0.010
cartilage condensation GO:0001502 3 0.010
positive regulation of immune effector process GO:0002699 3 0.010
release of sequestered calcium ion into cytosol GO:0051209 3 0.010
regulation of histone deacetylation GO:0031063 2 0.010
response to nutrient GO:0007584 3 0.010
peptidyl serine modification GO:0018209 2 0.010
negative regulation of axon extension involved in axon guidance GO:0048843 1 0.010
negative regulation of catabolic process GO:0009895 3 0.010
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090101 22 0.010
positive regulation of gtpase activity GO:0043547 1 0.010

id:ibd2573 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
connective tissue disease DOID:65 0 0.023
musculoskeletal system disease DOID:17 0 0.023
disease of anatomical entity DOID:7 0 0.023
bone disease DOID:0080001 0 0.023
bone development disease DOID:0080006 0 0.013
disease of cellular proliferation DOID:14566 0 0.013
cancer DOID:162 0 0.012
nervous system disease DOID:863 0 0.010