Danio rerio

0 known processes

lmo3

LIM domain only 3

(Aliases: zgc:110149,MGC110149)

lmo3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
forebrain development GO:0030900 96 0.918
Zebrafish
sensory organ development GO:0007423 393 0.714
Zebrafish Fly
brain development GO:0007420 293 0.695
Zebrafish
central nervous system development GO:0007417 387 0.660
Zebrafish
generation of neurons GO:0048699 385 0.591
cell proliferation in forebrain GO:0021846 3 0.553
neuron differentiation GO:0030182 353 0.525
camera type eye development GO:0043010 222 0.480
Zebrafish
eye development GO:0001654 277 0.468
Zebrafish
neuron projection development GO:0031175 180 0.423
forebrain regionalization GO:0021871 4 0.365
axon development GO:0061564 166 0.335
nucleobase containing compound biosynthetic process GO:0034654 205 0.331
Fly
limbic system development GO:0021761 16 0.295
neuron development GO:0048666 262 0.283
camera type eye morphogenesis GO:0048593 108 0.245
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.235
Fly
gabaergic neuron differentiation GO:0097154 2 0.220
hindbrain development GO:0030902 91 0.215
nitrogen compound metabolic process GO:0006807 319 0.197
Fly
response to stress GO:0006950 263 0.191
central nervous system neuron differentiation GO:0021953 74 0.181
regulation of nitrogen compound metabolic process GO:0051171 251 0.173
Fly
regulation of neuron projection development GO:0010975 40 0.171
neuron fate commitment GO:0048663 26 0.167
cellular nitrogen compound metabolic process GO:0034641 290 0.158
Fly
embryonic organ development GO:0048568 381 0.157
Zebrafish
sensory organ morphogenesis GO:0090596 200 0.151
regulation of macromolecule metabolic process GO:0060255 317 0.148
Fly
cellular aromatic compound metabolic process GO:0006725 295 0.146
Fly
negative regulation of biological process GO:0048519 304 0.143
Human
cellular component movement GO:0006928 335 0.134
diencephalon development GO:0021536 58 0.134
glial cell differentiation GO:0010001 42 0.133
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.133
cell projection organization GO:0030030 284 0.133
positive regulation of gtp catabolic process GO:0033126 1 0.131
neuron projection morphogenesis GO:0048812 161 0.128
stem cell proliferation GO:0072089 4 0.124
cell projection morphogenesis GO:0048858 244 0.122
cell fate commitment GO:0045165 99 0.121
cell proliferation in hindbrain GO:0021534 4 0.118
ventricular system development GO:0021591 12 0.118
embryonic camera type eye development GO:0031076 29 0.113
Zebrafish
regulation of neuron differentiation GO:0045664 56 0.113
cell proliferation in midbrain GO:0033278 4 0.113
organic substance biosynthetic process GO:1901576 289 0.111
Fly
forebrain neuron fate commitment GO:0021877 1 0.111
gtp metabolic process GO:0046039 4 0.110
cell morphogenesis GO:0000902 289 0.108
peripheral nervous system development GO:0007422 55 0.103
gene expression GO:0010467 252 0.102
Fly
nucleobase containing compound metabolic process GO:0006139 274 0.102
Fly
endocrine pancreas development GO:0031018 27 0.101
regulation of stem cell proliferation GO:0072091 2 0.099
guanosine containing compound catabolic process GO:1901069 2 0.097
regionalization GO:0003002 274 0.097
Fly
ear development GO:0043583 127 0.095
larval development GO:0002164 2 0.095
guanosine containing compound metabolic process GO:1901068 4 0.094
cell morphogenesis involved in differentiation GO:0000904 195 0.094
embryonic viscerocranium morphogenesis GO:0048703 52 0.093
cellular monovalent inorganic cation homeostasis GO:0030004 2 0.092
embryonic skeletal system development GO:0048706 97 0.091
positive regulation of gene expression GO:0010628 71 0.091
Fly
regulation of macromolecule biosynthetic process GO:0010556 225 0.089
Fly
purine nucleotide metabolic process GO:0006163 27 0.086
axonogenesis GO:0007409 152 0.086
embryonic cranial skeleton morphogenesis GO:0048701 90 0.086
organic cyclic compound biosynthetic process GO:1901362 223 0.084
Fly
localization of cell GO:0051674 244 0.084
regulation of glial cell differentiation GO:0045685 4 0.082
olfactory placode development GO:0071698 12 0.082
immune system process GO:0002376 241 0.082
pancreatic d cell differentiation GO:0003311 2 0.081
gtp catabolic process GO:0006184 2 0.081
nucleic acid metabolic process GO:0090304 244 0.079
Fly
regulation of biosynthetic process GO:0009889 250 0.079
Fly
forebrain cell migration GO:0021885 1 0.075
rna metabolic process GO:0016070 219 0.074
Fly
regulation of multicellular organismal process GO:0051239 277 0.072
regulation of oligodendrocyte differentiation GO:0048713 1 0.072
cellular macromolecule biosynthetic process GO:0034645 224 0.071
Fly
regulation of developmental process GO:0050793 247 0.071
Human
abducens nucleus development GO:0021742 2 0.067
locomotory behavior GO:0007626 34 0.067
Fly
axon regeneration GO:0031103 14 0.066
mechanoreceptor differentiation GO:0042490 37 0.066
determination of left right symmetry GO:0007368 179 0.065
fourth ventricle development GO:0021592 8 0.065
heterocycle biosynthetic process GO:0018130 215 0.063
Fly
positive regulation of rna metabolic process GO:0051254 59 0.062
Fly
embryonic organ morphogenesis GO:0048562 274 0.061
morphogenesis of an epithelium GO:0002009 333 0.061
head development GO:0060322 303 0.061
Zebrafish
cellular component morphogenesis GO:0032989 336 0.060
eye morphogenesis GO:0048592 144 0.059
optomotor response GO:0071632 1 0.059
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.057
Fly
embryonic retina morphogenesis in camera type eye GO:0060059 22 0.056
female sex differentiation GO:0046660 4 0.056
regulation of primary metabolic process GO:0080090 311 0.056
Fly
sensory system development GO:0048880 76 0.056
regulation of rna biosynthetic process GO:2001141 213 0.056
Fly
regulation of multicellular organismal development GO:2000026 223 0.054
cellular macromolecule metabolic process GO:0044260 391 0.053
Fly
compound eye development GO:0048749 2 0.053
stem cell differentiation GO:0048863 117 0.053
regulation of gene expression GO:0010468 265 0.053
Fly
regulation of metabolic process GO:0019222 359 0.053
Human Fly
neuron projection regeneration GO:0031102 16 0.053
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.052
Fly
specification of symmetry GO:0009799 204 0.051
ectodermal placode development GO:0071696 37 0.051
positive regulation of rna biosynthetic process GO:1902680 57 0.049
Fly
regeneration GO:0031099 91 0.049
maintenance of location GO:0051235 4 0.048
enzyme linked receptor protein signaling pathway GO:0007167 106 0.047
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.047
dopaminergic neuron differentiation GO:0071542 14 0.046
regulation of dendrite development GO:0050773 3 0.046
transcription from rna polymerase ii promoter GO:0006366 80 0.046
neuroblast proliferation GO:0007405 2 0.045
organic cyclic compound metabolic process GO:1901360 301 0.045
Fly
regulation of biological quality GO:0065008 263 0.045
cell part morphogenesis GO:0032990 246 0.044
endocrine system development GO:0035270 65 0.043
ectodermal placode morphogenesis GO:0071697 32 0.043
regulation of endothelial cell proliferation GO:0001936 1 0.042
biosynthetic process GO:0009058 294 0.042
Fly
digestive system development GO:0055123 289 0.042
embryonic skeletal system morphogenesis GO:0048704 93 0.042
chordate embryonic development GO:0043009 271 0.042
regulation of gtp catabolic process GO:0033124 2 0.042
telencephalon development GO:0021537 14 0.042
cell surface receptor signaling pathway GO:0007166 325 0.042
nucleic acid templated transcription GO:0097659 181 0.041
Fly
system process GO:0003008 185 0.041
dna templated transcription initiation GO:0006352 1 0.041
regulation of rna metabolic process GO:0051252 224 0.041
Fly
cellular response to chemical stimulus GO:0070887 157 0.040
neural tube development GO:0021915 62 0.039
inner ear development GO:0048839 126 0.039
organonitrogen compound metabolic process GO:1901564 74 0.039
keratinocyte differentiation GO:0030216 0 0.039
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.038
Fly
positive regulation of macromolecule metabolic process GO:0010604 93 0.038
Fly
cell fate specification GO:0001708 68 0.037
negative regulation of cellular metabolic process GO:0031324 77 0.037
Human
astrocyte differentiation GO:0048708 1 0.036
transmission of nerve impulse GO:0019226 19 0.036
regulation of multicellular organism growth GO:0040014 4 0.035
action potential GO:0001508 19 0.034
posterior lateral line neuromast mantle cell differentiation GO:0048924 1 0.034
regulation of neurogenesis GO:0050767 87 0.034
regulation of cellular biosynthetic process GO:0031326 245 0.033
Fly
midbrain development GO:0030901 28 0.033
oligodendrocyte cell fate specification GO:0021778 4 0.033
cell motility GO:0048870 244 0.033
cellular biosynthetic process GO:0044249 286 0.033
Fly
aromatic compound biosynthetic process GO:0019438 217 0.033
Fly
pancreas development GO:0031016 84 0.032
heterocycle metabolic process GO:0046483 290 0.032
Fly
regulation of nervous system development GO:0051960 90 0.032
negative regulation of cellular process GO:0048523 283 0.032
Human
response to external stimulus GO:0009605 264 0.032
behavior GO:0007610 74 0.032
Fly
lymphatic endothelial cell fate commitment GO:0060838 1 0.031
heart looping GO:0001947 94 0.030
cellular nitrogen compound biosynthetic process GO:0044271 218 0.030
Fly
ear morphogenesis GO:0042471 64 0.030
positive regulation of nervous system development GO:0051962 25 0.030
primary neural tube formation GO:0014020 1 0.029
neuromast development GO:0048884 46 0.029
tube morphogenesis GO:0035239 349 0.029
determination of bilateral symmetry GO:0009855 204 0.029
otolith development GO:0048840 32 0.028
negative regulation of gene expression GO:0010629 65 0.028
lateral inhibition GO:0046331 1 0.028
embryonic camera type eye morphogenesis GO:0048596 19 0.028
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.028
Fly
cranial nerve development GO:0021545 42 0.028
morphogenesis of an epithelial sheet GO:0002011 49 0.027
multicellular organismal signaling GO:0035637 22 0.027
inner ear receptor cell fate commitment GO:0060120 4 0.027
embryonic heart tube development GO:0035050 133 0.027
adult behavior GO:0030534 2 0.027
axon ensheathment in central nervous system GO:0032291 2 0.027
axon guidance GO:0007411 86 0.026
defense response to fungus GO:0050832 2 0.026
regulation of response to stimulus GO:0048583 269 0.026
Human
positive regulation of cellular metabolic process GO:0031325 94 0.026
Fly
lipid storage GO:0019915 1 0.026
response to chemical GO:0042221 320 0.026
Fly
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.026
positive regulation of nucleoside metabolic process GO:0045979 1 0.026
olfactory placode morphogenesis GO:0071699 7 0.026
wound healing GO:0042060 90 0.025
phosphate containing compound metabolic process GO:0006796 108 0.025
Human
epithelial cell differentiation GO:0030855 116 0.025
digestive tract development GO:0048565 265 0.025
positive regulation of biological process GO:0048518 253 0.025
Human Fly
locomotion GO:0040011 313 0.024
neuron projection guidance GO:0097485 86 0.024
positive regulation of metabolic process GO:0009893 108 0.024
Fly
neuronal action potential GO:0019228 18 0.024
negative regulation of transcription from rna polymerase ii promoter GO:0000122 16 0.024
epidermal cell fate specification GO:0009957 4 0.024
water homeostasis GO:0030104 4 0.024
brain morphogenesis GO:0048854 18 0.024
inner ear morphogenesis GO:0042472 63 0.023
regulation of dendrite morphogenesis GO:0048814 3 0.023
retina morphogenesis in camera type eye GO:0060042 79 0.023
response to external biotic stimulus GO:0043207 97 0.023
ventral spinal cord interneuron differentiation GO:0021514 12 0.023
forebrain anterior posterior pattern specification GO:0021797 3 0.023
cell migration GO:0016477 237 0.022
oligodendrocyte differentiation GO:0048709 23 0.022
transport GO:0006810 220 0.022
Fly
glial cell migration GO:0008347 3 0.022
taxis GO:0042330 109 0.022
phagocytosis GO:0006909 3 0.022
Fly
posterior lateral line development GO:0048916 38 0.022
nucleotide metabolic process GO:0009117 28 0.022
positive regulation of cellular catabolic process GO:0031331 3 0.022
central nervous system neuron development GO:0021954 29 0.022
cell cycle g1 s phase transition GO:0044843 1 0.022
gastrulation GO:0007369 208 0.022
positive regulation of transcription from rna polymerase ii promoter GO:0045944 22 0.021
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.021
dorsal ventral pattern formation GO:0009953 125 0.021
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.021
regulation of gtpase activity GO:0043087 2 0.021
neural tube formation GO:0001841 16 0.021
regulation of nucleotide catabolic process GO:0030811 2 0.021
angioblast cell migration GO:0035476 9 0.020
regulation of nucleic acid templated transcription GO:1903506 213 0.020
Fly
posterior lateral line system development GO:0048915 46 0.020
antimicrobial humoral response GO:0019730 2 0.020
regulation of cellular metabolic process GO:0031323 320 0.020
Human Fly
renal system development GO:0072001 94 0.020
pectoral fin morphogenesis GO:0035138 29 0.020
hair cell differentiation GO:0035315 32 0.020
long chain fatty acid metabolic process GO:0001676 1 0.020
mesenchymal cell differentiation GO:0048762 87 0.020
regulation of cell development GO:0060284 100 0.020
regulation of cell motility GO:2000145 46 0.019
neurological system process GO:0050877 62 0.019
homeostatic process GO:0042592 142 0.019
positive regulation of cellular biosynthetic process GO:0031328 68 0.019
Fly
nucleoside phosphate metabolic process GO:0006753 28 0.019
metencephalon development GO:0022037 27 0.019
macromolecule biosynthetic process GO:0009059 227 0.019
Fly
positive regulation of transport GO:0051050 2 0.019
posterior lateral line neuromast development GO:0048919 20 0.019
forebrain neuron differentiation GO:0021879 14 0.019
myelination GO:0042552 18 0.019
regulation of fibroblast growth factor receptor signaling pathway GO:0040036 20 0.019
regulation of purine nucleotide catabolic process GO:0033121 2 0.018
thalamus development GO:0021794 6 0.018
muscle structure development GO:0061061 196 0.018
regulation of nucleoside metabolic process GO:0009118 2 0.018
negative regulation of cellular catabolic process GO:0031330 3 0.018
tissue regeneration GO:0042246 74 0.018
forebrain generation of neurons GO:0021872 14 0.018
regulation of wnt signaling pathway GO:0030111 53 0.018
regulation of cell migration GO:0030334 40 0.018
embryonic pattern specification GO:0009880 44 0.017
development of primary female sexual characteristics GO:0046545 4 0.017
organophosphate metabolic process GO:0019637 37 0.017
retinal cell programmed cell death GO:0046666 2 0.017
extracellular structure organization GO:0043062 27 0.017
positive regulation of cell cycle GO:0045787 3 0.017
visual behavior GO:0007632 10 0.017
pancreatic d cell development GO:0003324 1 0.017
positive regulation of gtpase activity GO:0043547 1 0.017
blood vessel morphogenesis GO:0048514 216 0.016
positive regulation of neural precursor cell proliferation GO:2000179 1 0.016
cranial nerve morphogenesis GO:0021602 15 0.016
connective tissue development GO:0061448 99 0.016
regulation of transcription involved in cell fate commitment GO:0060850 1 0.016
nose development GO:0043584 3 0.016
positive regulation of epithelial cell differentiation GO:0030858 2 0.016
central nervous system myelination GO:0022010 2 0.016
forebrain morphogenesis GO:0048853 6 0.016
circulatory system process GO:0003013 87 0.016
nucleoside monophosphate catabolic process GO:0009125 4 0.016
response to organic substance GO:0010033 153 0.015
Fly
rhythmic process GO:0048511 21 0.015
Fly
negative regulation of synapse assembly GO:0051964 2 0.015
lateral line system development GO:0048925 76 0.015
exocrine pancreas development GO:0031017 28 0.015
skeletal system morphogenesis GO:0048705 102 0.015
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.015
developmental growth involved in morphogenesis GO:0060560 86 0.014
g1 s transition of mitotic cell cycle GO:0000082 1 0.014
multicellular organism growth GO:0035264 4 0.014
multicellular organismal response to stress GO:0033555 2 0.014
regulation of localization GO:0032879 104 0.014
regulation of binding GO:0051098 3 0.014
regulation of cell communication GO:0010646 232 0.014
Human
nerve development GO:0021675 45 0.014
semicircular canal development GO:0060872 24 0.014
mesenchymal cell development GO:0014031 78 0.014
regulation of cell proliferation GO:0042127 37 0.014
negative regulation of rna metabolic process GO:0051253 48 0.014
chemotaxis GO:0006935 104 0.014
regulation of anatomical structure morphogenesis GO:0022603 130 0.014
embryonic heart tube morphogenesis GO:0003143 108 0.014
positive regulation of nucleic acid templated transcription GO:1903508 57 0.014
Fly
positive regulation of biosynthetic process GO:0009891 68 0.013
Fly
spinal cord development GO:0021510 46 0.013
negative regulation of biosynthetic process GO:0009890 55 0.013
sensory epithelium regeneration GO:0070654 14 0.013
neural nucleus development GO:0048857 15 0.013
lateral line development GO:0048882 66 0.013
heart morphogenesis GO:0003007 156 0.013
neuron fate specification GO:0048665 20 0.013
regulation of cell migration involved in sprouting angiogenesis GO:0090049 3 0.013
skeletal system development GO:0001501 181 0.013
signal transduction GO:0007165 455 0.013
Human
neural precursor cell proliferation GO:0061351 20 0.013
response to biotic stimulus GO:0009607 97 0.013
embryonic eye morphogenesis GO:0048048 30 0.013
positive regulation of cell differentiation GO:0045597 30 0.013
Human
peripheral nervous system neuron differentiation GO:0048934 28 0.013
anterior posterior axis specification GO:0009948 20 0.013
cell cell signaling GO:0007267 52 0.013
pancreatic a cell development GO:0003322 2 0.013
epithelial cell development GO:0002064 42 0.013
interspecies interaction between organisms GO:0044419 4 0.013
positive regulation of catabolic process GO:0009896 4 0.013
regulation of cell projection organization GO:0031344 44 0.013
synaptic target recognition GO:0008039 1 0.013
retina development in camera type eye GO:0060041 146 0.013
regulation of cellular component size GO:0032535 30 0.012
neuroblast differentiation GO:0014016 1 0.012
neural crest formation GO:0014029 14 0.012
sympathetic nervous system development GO:0048485 3 0.012
positive regulation of secretion GO:0051047 1 0.012
neuromast mantle cell differentiation GO:0048888 1 0.012
facial nucleus development GO:0021754 7 0.012
skin development GO:0043588 54 0.012
nephron tubule morphogenesis GO:0072078 1 0.012
cellular sodium ion homeostasis GO:0006883 1 0.012
neural crest cell fate specification GO:0014036 5 0.012
cardiocyte differentiation GO:0035051 44 0.012
vasculature development GO:0001944 278 0.012
cranial nerve formation GO:0021603 13 0.012
extracellular matrix organization GO:0030198 27 0.012
pigment granule organization GO:0048753 4 0.012
response to light stimulus GO:0009416 46 0.012
mammillary body development GO:0021767 4 0.012
neural crest cell differentiation GO:0014033 72 0.011
heart process GO:0003015 71 0.011
tyrosine phosphorylation of stat protein GO:0007260 1 0.011
negative regulation of gliogenesis GO:0014014 1 0.011
cellular response to organic substance GO:0071310 105 0.011
positive regulation of cell development GO:0010720 25 0.011
nucleobase containing small molecule metabolic process GO:0055086 32 0.011
regulation of inner ear receptor cell differentiation GO:2000980 1 0.011
response to axon injury GO:0048678 14 0.011
small molecule metabolic process GO:0044281 77 0.011
positive regulation of cellular process GO:0048522 201 0.011
Human Fly
sensory perception of chemical stimulus GO:0007606 3 0.011
cell differentiation in spinal cord GO:0021515 40 0.011
anterior commissure morphogenesis GO:0021960 3 0.011
wnt signaling pathway GO:0016055 80 0.011
heart development GO:0007507 313 0.011
regulation of biomineral tissue development GO:0070167 2 0.011
medulla oblongata development GO:0021550 4 0.011
regulation of signal transduction GO:0009966 225 0.011
Human
regulation of cellular response to growth factor stimulus GO:0090287 35 0.011
response to wounding GO:0009611 116 0.011
startle response GO:0001964 4 0.011
neuroblast fate determination GO:0007400 1 0.011
forebrain neuron development GO:0021884 7 0.011
neuroblast fate commitment GO:0014017 1 0.011
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.011
axis specification GO:0009798 43 0.011
purine ribonucleotide metabolic process GO:0009150 27 0.010
cardioblast migration GO:0003260 7 0.010
positive regulation of stem cell proliferation GO:2000648 1 0.010
photoreceptor cell fate commitment GO:0046552 1 0.010
dendrite development GO:0016358 9 0.010
regulation of heart contraction GO:0008016 32 0.010
ventral spinal cord interneuron fate commitment GO:0060579 3 0.010
atp catabolic process GO:0006200 4 0.010
morphogenesis of embryonic epithelium GO:0016331 30 0.010
fibroblast growth factor receptor signaling pathway GO:0008543 22 0.010
dendrite morphogenesis GO:0048813 5 0.010
chemosensory behavior GO:0007635 1 0.010
cellular component assembly involved in morphogenesis GO:0010927 107 0.010
positive regulation of developmental process GO:0051094 50 0.010
Human
cell cycle arrest GO:0007050 1 0.010
determination of heart left right asymmetry GO:0061371 117 0.010
regulation of catalytic activity GO:0050790 55 0.010

lmo3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org