Danio rerio

0 known processes

lrtm2

leucine-rich repeats and transmembrane domains 2

(Aliases: si:ch211-87p6.3)

lrtm2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organelle assembly GO:0070925 110 0.166
cellular component biogenesis GO:0044085 178 0.139
brain development GO:0007420 293 0.132
single organism localization GO:1902578 225 0.108
cell part morphogenesis GO:0032990 246 0.092
larval development GO:0002164 2 0.082
cell migration GO:0016477 237 0.081
cellular component morphogenesis GO:0032989 336 0.077
immune system process GO:0002376 241 0.074
central nervous system development GO:0007417 387 0.071
establishment of organelle localization GO:0051656 45 0.069
cilium organization GO:0044782 71 0.069
positive regulation of cell cycle GO:0045787 3 0.066
synaptic vesicle transport GO:0048489 1 0.065
cell morphogenesis GO:0000902 289 0.065
regulation of intracellular protein transport GO:0033157 3 0.065
nuclear migration GO:0007097 3 0.065
sensory organ development GO:0007423 393 0.064
organelle organization GO:0006996 227 0.063
positive regulation of transport GO:0051050 2 0.063
signal transduction GO:0007165 455 0.063
microtubule based process GO:0007017 60 0.062
regulation of establishment of protein localization GO:0070201 4 0.060
guanosine containing compound metabolic process GO:1901068 4 0.059
head development GO:0060322 303 0.058
single organism organelle organization GO:1902589 199 0.058
regulation of primary metabolic process GO:0080090 311 0.057
transport GO:0006810 220 0.055
neurotransmitter transport GO:0006836 2 0.054
oocyte anterior posterior axis specification GO:0007314 4 0.054
digestive tract development GO:0048565 265 0.053
aromatic compound biosynthetic process GO:0019438 217 0.053
generation of neurons GO:0048699 385 0.053
regulation of cytoplasmic transport GO:1903649 4 0.052
regulation of protein complex assembly GO:0043254 3 0.051
eye development GO:0001654 277 0.051
locomotion GO:0040011 313 0.051
establishment of synaptic vesicle localization GO:0097480 1 0.051
gtp metabolic process GO:0046039 4 0.051
negative regulation of biological process GO:0048519 304 0.050
heart development GO:0007507 313 0.050
neuron development GO:0048666 262 0.049
ameboidal type cell migration GO:0001667 143 0.049
exocytosis GO:0006887 1 0.047
ear development GO:0043583 127 0.047
single organism transport GO:0044765 206 0.047
regulation of protein transport GO:0051223 3 0.046
cellular component assembly GO:0022607 170 0.046
cell projection morphogenesis GO:0048858 244 0.044
cell motility GO:0048870 244 0.043
positive regulation of cellular component biogenesis GO:0044089 3 0.043
microtubule based movement GO:0007018 33 0.042
synaptic vesicle localization GO:0097479 1 0.041
membrane fusion GO:0061025 2 0.041
response to external stimulus GO:0009605 264 0.041
neurotransmitter secretion GO:0007269 2 0.041
regulation of biological quality GO:0065008 263 0.041
cellular component movement GO:0006928 335 0.041
cilium assembly GO:0042384 58 0.040
actin polymerization or depolymerization GO:0008154 2 0.040
chordate embryonic development GO:0043009 271 0.039
fertilization GO:0009566 3 0.039
gtp catabolic process GO:0006184 2 0.038
digestive tract morphogenesis GO:0048546 231 0.038
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.038
developmental growth GO:0048589 166 0.038
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.037
regulation of reproductive process GO:2000241 4 0.037
aging GO:0007568 2 0.036
positive regulation of cellular catabolic process GO:0031331 3 0.036
cytoplasm organization GO:0007028 4 0.036
multi organism process GO:0051704 134 0.036
vesicle localization GO:0051648 27 0.036
regulation of circadian rhythm GO:0042752 4 0.036
cellular macromolecule metabolic process GO:0044260 391 0.036
cytoskeleton organization GO:0007010 96 0.035
compound eye development GO:0048749 2 0.035
hematopoietic or lymphoid organ development GO:0048534 191 0.035
cilium morphogenesis GO:0060271 85 0.035
embryonic organ morphogenesis GO:0048562 274 0.034
guanosine containing compound catabolic process GO:1901069 2 0.034
protein polymerization GO:0051258 4 0.034
response to stress GO:0006950 263 0.034
neuron differentiation GO:0030182 353 0.034
positive regulation of nucleoside metabolic process GO:0045979 1 0.034
tube morphogenesis GO:0035239 349 0.033
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.033
synaptic growth at neuromuscular junction GO:0051124 2 0.032
microtubule cytoskeleton organization GO:0000226 33 0.032
single organism metabolic process GO:0044710 217 0.032
morphogenesis of an epithelium GO:0002009 333 0.032
cellular component assembly involved in morphogenesis GO:0010927 107 0.032
g protein coupled receptor signaling pathway GO:0007186 74 0.032
inner ear development GO:0048839 126 0.031
homeostatic process GO:0042592 142 0.031
single fertilization GO:0007338 3 0.031
digestive system development GO:0055123 289 0.030
hemopoiesis GO:0030097 183 0.030
positive regulation of catabolic process GO:0009896 4 0.029
negative regulation of cellular process GO:0048523 283 0.029
regulation of synapse organization GO:0050807 3 0.029
establishment of localization GO:0051234 244 0.029
establishment of localization in cell GO:0051649 77 0.029
hepaticobiliary system development GO:0061008 98 0.029
rna localization GO:0006403 4 0.029
protein import GO:0017038 3 0.029
nucleobase containing compound metabolic process GO:0006139 274 0.029
pole plasm assembly GO:0007315 4 0.028
regulation of signal transduction GO:0009966 225 0.028
immune system development GO:0002520 191 0.028
response to chemical GO:0042221 320 0.028
single organism membrane fusion GO:0044801 2 0.028
localization of cell GO:0051674 244 0.028
protein localization to nucleus GO:0034504 3 0.027
sensory system development GO:0048880 76 0.027
appendage development GO:0048736 80 0.027
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.027
posterior lateral line system development GO:0048915 46 0.027
protein import into nucleus GO:0006606 3 0.027
embryonic organ development GO:0048568 381 0.026
organelle localization GO:0051640 49 0.026
mitochondrion organization GO:0007005 4 0.026
organic substance biosynthetic process GO:1901576 289 0.026
phosphorus metabolic process GO:0006793 109 0.025
organic cyclic compound metabolic process GO:1901360 301 0.025
nuclear transport GO:0051169 4 0.025
cellular protein metabolic process GO:0044267 129 0.025
antimicrobial humoral response GO:0019730 2 0.025
cellular aromatic compound metabolic process GO:0006725 295 0.025
growth GO:0040007 174 0.025
liver development GO:0001889 96 0.024
rna biosynthetic process GO:0032774 181 0.024
organelle fusion GO:0048284 3 0.024
cognition GO:0050890 1 0.024
single organism nuclear import GO:1902593 3 0.024
cellular component disassembly GO:0022411 1 0.024
regulation of nucleoside metabolic process GO:0009118 2 0.024
peptide transport GO:0015833 1 0.023
regulation of protein polymerization GO:0032271 2 0.023
positive regulation of biological process GO:0048518 253 0.023
embryo development ending in birth or egg hatching GO:0009792 271 0.023
nitrogen compound metabolic process GO:0006807 319 0.023
regulation of localization GO:0032879 104 0.023
negative regulation of synapse assembly GO:0051964 2 0.023
biosynthetic process GO:0009058 294 0.023
regulation of cell communication GO:0010646 232 0.023
regulation of gtp catabolic process GO:0033124 2 0.023
establishment or maintenance of cell polarity GO:0007163 29 0.022
spermatid development GO:0007286 2 0.022
system process GO:0003008 185 0.022
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.022
protein targeting to nucleus GO:0044744 3 0.022
regulation of signaling GO:0023051 235 0.022
regulation of gtpase activity GO:0043087 2 0.021
phagocytosis GO:0006909 3 0.021
pancreas development GO:0031016 84 0.021
cytokinesis GO:0000910 3 0.021
regulation of purine nucleotide catabolic process GO:0033121 2 0.021
regulation of protein localization to nucleus GO:1900180 2 0.021
regulation of multicellular organism growth GO:0040014 4 0.021
positive regulation of secretion by cell GO:1903532 1 0.021
meiotic nuclear division GO:0007126 4 0.021
cellular localization GO:0051641 97 0.021
negative regulation of signaling GO:0023057 96 0.021
regulation of cellular metabolic process GO:0031323 320 0.021
angiogenesis GO:0001525 158 0.021
regulation of macromolecule biosynthetic process GO:0010556 225 0.020
heterocycle metabolic process GO:0046483 290 0.020
regionalization GO:0003002 274 0.020
intracellular signal transduction GO:0035556 85 0.020
regulation of metal ion transport GO:0010959 4 0.020
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.020
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.020
regulation of cellular amine metabolic process GO:0033238 0 0.020
tissue regeneration GO:0042246 74 0.020
response to alkaloid GO:0043279 2 0.020
i kappab kinase nf kappab signaling GO:0007249 4 0.020
protein metabolic process GO:0019538 183 0.020
eye morphogenesis GO:0048592 144 0.019
positive regulation of secretion GO:0051047 1 0.019
regulation of metabolic process GO:0019222 359 0.019
actin cytoskeleton organization GO:0030036 63 0.019
response to other organism GO:0051707 97 0.019
protein localization to plasma membrane GO:0072659 1 0.019
developmental programmed cell death GO:0010623 4 0.019
regulation of synaptic plasticity GO:0048167 1 0.019
autophagy GO:0006914 4 0.019
viral process GO:0016032 1 0.019
positive regulation of gtpase activity GO:0043547 1 0.019
maternal determination of anterior posterior axis embryo GO:0008358 4 0.019
regulation of tube size GO:0035150 2 0.019
hydrogen peroxide metabolic process GO:0042743 2 0.018
stem cell maintenance GO:0019827 4 0.018
cell projection organization GO:0030030 284 0.018
kupffer s vesicle development GO:0070121 50 0.018
axon development GO:0061564 166 0.018
response to wounding GO:0009611 116 0.018
developmental growth involved in morphogenesis GO:0060560 86 0.018
taxis GO:0042330 109 0.018
macromolecular complex disassembly GO:0032984 1 0.018
peptidyl serine phosphorylation GO:0018105 1 0.018
neuron projection morphogenesis GO:0048812 161 0.018
nucleocytoplasmic transport GO:0006913 4 0.018
regulation of dendrite development GO:0050773 3 0.018
maintenance of location GO:0051235 4 0.018
multicellular organism growth GO:0035264 4 0.018
cytoskeleton dependent cytokinesis GO:0061640 3 0.018
amine metabolic process GO:0009308 2 0.018
cellular response to chemical stimulus GO:0070887 157 0.018
muscle structure development GO:0061061 196 0.018
embryonic skeletal system morphogenesis GO:0048704 93 0.018
establishment of protein localization to organelle GO:0072594 4 0.017
organic cyclic compound biosynthetic process GO:1901362 223 0.017
cellular nitrogen compound metabolic process GO:0034641 290 0.017
cortical cytoskeleton organization GO:0030865 1 0.017
mesenchyme development GO:0060485 127 0.017
organic acid metabolic process GO:0006082 31 0.017
multi organism cellular process GO:0044764 2 0.017
establishment of vesicle localization GO:0051650 24 0.017
positive regulation of protein complex assembly GO:0031334 2 0.017
cell surface receptor signaling pathway GO:0007166 325 0.017
regulation of protein targeting GO:1903533 2 0.017
axon ensheathment in central nervous system GO:0032291 2 0.017
actin filament based process GO:0030029 64 0.016
regulation of nucleotide catabolic process GO:0030811 2 0.016
cell projection assembly GO:0030031 64 0.016
response to abiotic stimulus GO:0009628 122 0.016
positive regulation of cytoskeleton organization GO:0051495 3 0.016
camera type eye development GO:0043010 222 0.016
cellular protein catabolic process GO:0044257 4 0.016
intracellular mrna localization GO:0008298 1 0.016
regulation of synapse assembly GO:0051963 3 0.016
axon guidance GO:0007411 86 0.016
establishment of protein localization to plasma membrane GO:0090002 1 0.016
positive regulation of nucleotide catabolic process GO:0030813 1 0.016
nuclear import GO:0051170 3 0.016
cilium movement GO:0003341 26 0.016
actin filament polymerization GO:0030041 2 0.016
specification of symmetry GO:0009799 204 0.016
posterior lateral line development GO:0048916 38 0.016
forebrain development GO:0030900 96 0.016
post golgi vesicle mediated transport GO:0006892 1 0.016
neuron projection extension GO:1990138 45 0.016
negative regulation of cell communication GO:0010648 96 0.016
regulation of muscle contraction GO:0006937 3 0.016
positive regulation of protein polymerization GO:0032273 2 0.016
positive regulation of leukocyte mediated cytotoxicity GO:0001912 1 0.016
gastrulation GO:0007369 208 0.016
embryonic skeletal system development GO:0048706 97 0.016
nucleic acid metabolic process GO:0090304 244 0.015
regulation of inflammatory response GO:0050727 2 0.015
single organism cellular localization GO:1902580 46 0.015
cell killing GO:0001906 2 0.015
striated muscle tissue development GO:0014706 110 0.015
negative regulation of protein serine threonine kinase activity GO:0071901 2 0.015
meiotic cell cycle process GO:1903046 3 0.015
embryonic skeletal joint morphogenesis GO:0060272 3 0.015
rna metabolic process GO:0016070 219 0.015
regulation of cellular amino acid metabolic process GO:0006521 0 0.015
regulation of locomotion GO:0040012 55 0.015
regulation of blood pressure GO:0008217 1 0.015
cellular nitrogen compound biosynthetic process GO:0044271 218 0.015
cellular amine metabolic process GO:0044106 2 0.015
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.015
embryonic skeletal joint development GO:0072498 3 0.015
heart process GO:0003015 71 0.015
muscle cell development GO:0055001 115 0.015
adherens junction organization GO:0034332 4 0.015
peptidyl serine modification GO:0018209 2 0.015
response to monosaccharide GO:0034284 3 0.014
membrane organization GO:0061024 21 0.014
positive regulation of gtp catabolic process GO:0033126 1 0.014
cellular response to extracellular stimulus GO:0031668 2 0.014
blood vessel development GO:0001568 246 0.014
regulation of nitrogen compound metabolic process GO:0051171 251 0.014
regulation of macromolecule metabolic process GO:0060255 317 0.014
determination of left right symmetry GO:0007368 179 0.014
positive regulation of blood circulation GO:1903524 2 0.014
carboxylic acid metabolic process GO:0019752 22 0.014
medial fin development GO:0033338 16 0.014
regulation of cell activation GO:0050865 1 0.014
response to hexose GO:0009746 3 0.014
negative regulation of catabolic process GO:0009895 3 0.014
actin filament based movement GO:0030048 1 0.014
cellular biosynthetic process GO:0044249 286 0.014
protein modification process GO:0036211 100 0.014
organonitrogen compound metabolic process GO:1901564 74 0.014
lateral line system development GO:0048925 76 0.014
negative regulation of mapk cascade GO:0043409 4 0.014
wound healing GO:0042060 90 0.014
chemotaxis GO:0006935 104 0.014
pigmentation GO:0043473 85 0.014
regulation of rna biosynthetic process GO:2001141 213 0.014
gland development GO:0048732 143 0.014
stem cell proliferation GO:0072089 4 0.014
macromolecule biosynthetic process GO:0009059 227 0.014
cell morphogenesis involved in differentiation GO:0000904 195 0.014
regulation of carbohydrate metabolic process GO:0006109 4 0.013
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.013
regulation of calcium ion transport GO:0051924 2 0.013
developmental cell growth GO:0048588 52 0.013
stem cell division GO:0017145 1 0.013
heterocycle biosynthetic process GO:0018130 215 0.013
protein complex disassembly GO:0043241 1 0.013
cellular carbohydrate metabolic process GO:0044262 4 0.013
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.013
macromolecule modification GO:0043412 111 0.013
negative regulation of protein phosphorylation GO:0001933 4 0.013
striated muscle cell differentiation GO:0051146 129 0.013
inositol lipid mediated signaling GO:0048017 2 0.013
actomyosin structure organization GO:0031032 53 0.013
vasculature development GO:0001944 278 0.013
neuron projection guidance GO:0097485 86 0.013
regulation of response to stimulus GO:0048583 269 0.013
adult behavior GO:0030534 2 0.013
cortical actin cytoskeleton organization GO:0030866 1 0.013
fin regeneration GO:0031101 51 0.013
neuroblast proliferation GO:0007405 2 0.013
neural nucleus development GO:0048857 15 0.013
spermatid differentiation GO:0048515 2 0.013
cell growth GO:0016049 57 0.013
regulation of cellular component movement GO:0051270 55 0.013
leukocyte mediated cytotoxicity GO:0001909 1 0.013
cardiac muscle cell development GO:0055013 20 0.012
gene expression GO:0010467 252 0.012
regulation of cellular ketone metabolic process GO:0010565 7 0.012
neuron projection development GO:0031175 180 0.012
convergent extension GO:0060026 118 0.012
membrane invagination GO:0010324 1 0.012
glucose import GO:0046323 2 0.012
response to drug GO:0042493 3 0.012
heart contraction GO:0060047 71 0.012
chemosensory behavior GO:0007635 1 0.012
endosomal transport GO:0016197 2 0.012
regulation of cell motility GO:2000145 46 0.012
response to biotic stimulus GO:0009607 97 0.012
golgi vesicle transport GO:0048193 3 0.012
regulation of multicellular organismal process GO:0051239 277 0.012
mechanosensory lateral line system development GO:0048881 49 0.012
endoderm development GO:0007492 49 0.012
neuron neuron synaptic transmission GO:0007270 1 0.012
regulation of organ growth GO:0046620 3 0.012
neurological system process GO:0050877 62 0.012
retina development in camera type eye GO:0060041 146 0.012
regulation of rho protein signal transduction GO:0035023 2 0.012
cell cell signaling GO:0007267 52 0.012
morphogenesis of an epithelial fold GO:0060571 1 0.012
proteasomal protein catabolic process GO:0010498 2 0.012
cellular response to external stimulus GO:0071496 2 0.012
regulation of blood vessel size GO:0050880 2 0.012
negative regulation of protein kinase activity GO:0006469 4 0.012
response to external biotic stimulus GO:0043207 97 0.012
small molecule metabolic process GO:0044281 77 0.011
establishment of blood brain barrier GO:0060856 2 0.011
phosphate containing compound metabolic process GO:0006796 108 0.011
regulation of cell migration GO:0030334 40 0.011
regulation of dendrite morphogenesis GO:0048814 3 0.011
regulation of gene expression GO:0010468 265 0.011
regulation of protein depolymerization GO:1901879 1 0.011
regulation of developmental process GO:0050793 247 0.011
hindbrain development GO:0030902 91 0.011
regulation of protein import into nucleus GO:0042306 2 0.011
regulation of transporter activity GO:0032409 2 0.011
centrosome localization GO:0051642 1 0.011
muscle cell differentiation GO:0042692 139 0.011
cellular response to xenobiotic stimulus GO:0071466 35 0.011
negative regulation of gene expression GO:0010629 65 0.011
erythrocyte homeostasis GO:0034101 55 0.011
cell cycle g1 s phase transition GO:0044843 1 0.011
positive regulation of immune effector process GO:0002699 3 0.011
regulation of neural precursor cell proliferation GO:2000177 3 0.011
skeletal system development GO:0001501 181 0.011
hatching gland development GO:0048785 3 0.011
determination of bilateral symmetry GO:0009855 204 0.011
axonogenesis GO:0007409 152 0.011
regulation of rna metabolic process GO:0051252 224 0.011
reactive oxygen species metabolic process GO:0072593 6 0.011
positive regulation of cell activation GO:0050867 1 0.011
multicellular organismal homeostasis GO:0048871 29 0.011
regulation of growth GO:0040008 42 0.011
response to glucose GO:0009749 3 0.011
erk1 and erk2 cascade GO:0070371 4 0.011
hatching GO:0035188 4 0.011
otolith development GO:0048840 32 0.011
cellular ketone metabolic process GO:0042180 11 0.011
germ line stem cell maintenance GO:0030718 2 0.011
regulation of biosynthetic process GO:0009889 250 0.011
protein depolymerization GO:0051261 1 0.011
blood vessel morphogenesis GO:0048514 216 0.011
regulation of multicellular organismal development GO:2000026 223 0.011
camera type eye morphogenesis GO:0048593 108 0.011
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.011
cardiac cell development GO:0055006 21 0.011
embryonic hemopoiesis GO:0035162 53 0.011
purine nucleotide metabolic process GO:0006163 27 0.010
ear morphogenesis GO:0042471 64 0.010
cellular protein modification process GO:0006464 100 0.010
positive regulation of cellular metabolic process GO:0031325 94 0.010
regulation of protein localization to plasma membrane GO:1903076 1 0.010
regulation of oocyte development GO:0060281 3 0.010
fatty acid biosynthetic process GO:0006633 4 0.010
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.010
phagocytosis engulfment GO:0006911 1 0.010
photoreceptor cell development GO:0042461 40 0.010
cellular response to light stimulus GO:0071482 4 0.010

lrtm2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.044
nervous system disease DOID:863 0 0.044
immune system disease DOID:2914 0 0.021
sensory system disease DOID:0050155 0 0.012