Danio rerio

0 known processes

puf60b

poly-U binding splicing factor b

(Aliases: zgc:86806,si:zc12p8.2,si:ch211-12p8.2,SIAHBP1,wu:fb33e11,fe37c05,wu:fe37c05,repressor)

puf60b biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of mrna splicing via spliceosome GO:0048024 3 0.724
Fly
alternative mrna splicing via spliceosome GO:0000380 1 0.697
Fly
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.685
Fly
regulation of meiotic cell cycle GO:0051445 1 0.580
Worm
regulation of gene expression GO:0010468 265 0.553
Fly
spliceosomal complex assembly GO:0000245 1 0.530
Fly
regulation of macromolecule metabolic process GO:0060255 317 0.392
Fly
nucleic acid metabolic process GO:0090304 244 0.371
Fly
rna metabolic process GO:0016070 219 0.345
Fly
regulation of mrna processing GO:0050684 3 0.335
Fly
organic cyclic compound metabolic process GO:1901360 301 0.305
Fly
organic cyclic compound biosynthetic process GO:1901362 223 0.299
meiotic nuclear division GO:0007126 4 0.297
Worm
heterocycle biosynthetic process GO:0018130 215 0.282
biosynthetic process GO:0009058 294 0.277
organelle organization GO:0006996 227 0.274
Worm
negative regulation of cellular process GO:0048523 283 0.273
cellular macromolecule metabolic process GO:0044260 391 0.252
Fly
embryo development ending in birth or egg hatching GO:0009792 271 0.243
Worm
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.240
Fly
regulation of nitrogen compound metabolic process GO:0051171 251 0.232
Fly
regulation of cellular metabolic process GO:0031323 320 0.225
Fly
cellular aromatic compound metabolic process GO:0006725 295 0.223
Fly
negative regulation of biological process GO:0048519 304 0.204
nitrogen compound metabolic process GO:0006807 319 0.201
Fly
rna splicing via transesterification reactions GO:0000375 10 0.183
Fly
heterocycle metabolic process GO:0046483 290 0.182
Fly
regulation of primary metabolic process GO:0080090 311 0.158
Fly
mrna metabolic process GO:0016071 20 0.155
Fly
positive regulation of mrna processing GO:0050685 1 0.155
aromatic compound biosynthetic process GO:0019438 217 0.152
stem cell maintenance GO:0019827 4 0.145
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.130
Fly
single organism organelle organization GO:1902589 199 0.129
regulation of rna metabolic process GO:0051252 224 0.128
Fly
nucleobase containing compound metabolic process GO:0006139 274 0.124
Fly
hematopoietic or lymphoid organ development GO:0048534 191 0.116
macromolecule biosynthetic process GO:0009059 227 0.111
regulation of metabolic process GO:0019222 359 0.103
Fly
single organism localization GO:1902578 225 0.100
cellular component assembly GO:0022607 170 0.098
Fly
positive regulation of biological process GO:0048518 253 0.097
adult behavior GO:0030534 2 0.097
gene expression GO:0010467 252 0.093
Fly
regulation of gene expression epigenetic GO:0040029 11 0.092
establishment of localization GO:0051234 244 0.091
Worm
regulation of biosynthetic process GO:0009889 250 0.089
rna splicing GO:0008380 16 0.087
Fly
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.087
regulation of rna biosynthetic process GO:2001141 213 0.081
positive regulation of mrna metabolic process GO:1903313 2 0.081
catabolic process GO:0009056 32 0.078
protein metabolic process GO:0019538 183 0.077
regulation of developmental process GO:0050793 247 0.076
protein complex biogenesis GO:0070271 30 0.073
organic substance biosynthetic process GO:1901576 289 0.073
response to stress GO:0006950 263 0.072
single organism transport GO:0044765 206 0.070
regulation of cellular biosynthetic process GO:0031326 245 0.068
cellular biosynthetic process GO:0044249 286 0.068
regulation of signal transduction GO:0009966 225 0.067
modification dependent protein catabolic process GO:0019941 3 0.066
aging GO:0007568 2 0.064
negative regulation of ras protein signal transduction GO:0046580 1 0.063
growth GO:0040007 174 0.062
Fly
negative regulation of cellular biosynthetic process GO:0031327 55 0.062
regulation of transcription dna templated GO:0006355 213 0.061
macromolecular complex subunit organization GO:0043933 74 0.061
Fly
positive regulation of cell cycle GO:0045787 3 0.060
oxoacid metabolic process GO:0043436 31 0.059
nucleocytoplasmic transport GO:0006913 4 0.059
larval development GO:0002164 2 0.059
Worm
transcription dna templated GO:0006351 181 0.059
cellular protein catabolic process GO:0044257 4 0.056
ribonucleoprotein complex assembly GO:0022618 5 0.052
Fly
regulation of response to stimulus GO:0048583 269 0.052
regulation of nucleic acid templated transcription GO:1903506 213 0.052
signal transduction GO:0007165 455 0.052
cell proliferation GO:0008283 80 0.051
Worm
regionalization GO:0003002 274 0.051
protein acetylation GO:0006473 2 0.050
mitotic cell cycle embryonic GO:0045448 2 0.050
neuron projection development GO:0031175 180 0.049
Worm
positive regulation of metabolic process GO:0009893 108 0.048
positive regulation of mrna splicing via spliceosome GO:0048026 1 0.048
regulation of multicellular organismal development GO:2000026 223 0.048
cellular macromolecule catabolic process GO:0044265 12 0.048
nuclear transport GO:0051169 4 0.047
rna localization GO:0006403 4 0.047
cell morphogenesis GO:0000902 289 0.047
Worm
cell cycle process GO:0022402 53 0.046
Worm
nucleobase containing compound biosynthetic process GO:0034654 205 0.046
proteasomal protein catabolic process GO:0010498 2 0.046
multicellular organism growth GO:0035264 4 0.046
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.045
mrna processing GO:0006397 14 0.044
Fly
pole plasm assembly GO:0007315 4 0.044
negative regulation of macromolecule metabolic process GO:0010605 76 0.042
cytokinesis GO:0000910 3 0.042
cellular macromolecular complex assembly GO:0034622 24 0.042
Fly
hemopoiesis GO:0030097 183 0.041
protein complex subunit organization GO:0071822 46 0.041
axon development GO:0061564 166 0.041
Worm
mrna splicing via spliceosome GO:0000398 10 0.041
Fly
transport GO:0006810 220 0.041
Worm
ubiquitin dependent protein catabolic process GO:0006511 3 0.041
immune system development GO:0002520 191 0.040
rna export from nucleus GO:0006405 1 0.040
stem cell development GO:0048864 82 0.040
cell projection morphogenesis GO:0048858 244 0.039
Worm
macromolecular complex assembly GO:0065003 35 0.039
Fly
response to organic substance GO:0010033 153 0.039
mrna 3 end processing GO:0031124 2 0.039
cell motility GO:0048870 244 0.039
locomotion GO:0040011 313 0.039
Worm
carboxylic acid metabolic process GO:0019752 22 0.039
anterior posterior axis specification GO:0009948 20 0.038
methylation GO:0032259 22 0.038
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.037
cellular protein metabolic process GO:0044267 129 0.036
segmentation GO:0035282 97 0.036
regulation of symbiosis encompassing mutualism through parasitism GO:0043903 1 0.036
positive regulation of macromolecule metabolic process GO:0010604 93 0.035
maternal determination of anterior posterior axis embryo GO:0008358 4 0.034
maintenance of location GO:0051235 4 0.034
cellular amine metabolic process GO:0044106 2 0.034
organic acid metabolic process GO:0006082 31 0.034
macromolecule modification GO:0043412 111 0.034
organelle fission GO:0048285 23 0.033
Worm
regulation of cell communication GO:0010646 232 0.033
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.033
negative regulation of gene expression GO:0010629 65 0.033
response to chemical GO:0042221 320 0.032
Worm
cell cycle GO:0007049 93 0.032
Worm Fly
establishment of protein localization to organelle GO:0072594 4 0.031
positive regulation of rna splicing GO:0033120 1 0.031
regulation of synapse organization GO:0050807 3 0.031
positive regulation of developmental process GO:0051094 50 0.030
cellular component movement GO:0006928 335 0.030
Worm
chordate embryonic development GO:0043009 271 0.030
dna methylation or demethylation GO:0044728 8 0.029
protein complex assembly GO:0006461 30 0.029
regulation of cell cycle process GO:0010564 20 0.028
Worm
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.028
Worm
internal peptidyl lysine acetylation GO:0018393 2 0.028
regulation of multicellular organismal process GO:0051239 277 0.028
nucleic acid templated transcription GO:0097659 181 0.027
transcription from rna polymerase iii promoter GO:0006383 1 0.027
regulation of signaling GO:0023051 235 0.027
synaptic growth at neuromuscular junction GO:0051124 2 0.027
macromolecule methylation GO:0043414 19 0.026
cellular ketone metabolic process GO:0042180 11 0.026
cell surface receptor signaling pathway GO:0007166 325 0.026
lipid storage GO:0019915 1 0.026
regulation of protein ubiquitination GO:0031396 3 0.026
negative regulation of nuclear division GO:0051784 3 0.026
endocytosis GO:0006897 16 0.026
Worm
cellular response to dsrna GO:0071359 1 0.025
central nervous system development GO:0007417 387 0.025
modification dependent macromolecule catabolic process GO:0043632 3 0.025
regulation of cellular ketone metabolic process GO:0010565 7 0.025
oxidation reduction process GO:0055114 41 0.024
chromatin modification GO:0016568 21 0.024
developmental growth GO:0048589 166 0.023
positive regulation of biosynthetic process GO:0009891 68 0.023
negative regulation of nucleic acid templated transcription GO:1903507 45 0.023
rna 3 end processing GO:0031123 2 0.022
cellular response to chemical stimulus GO:0070887 157 0.022
striated muscle tissue development GO:0014706 110 0.022
regulation of nuclear division GO:0051783 9 0.022
Worm
3 utr mediated mrna stabilization GO:0070935 3 0.022
cellular protein modification process GO:0006464 100 0.021
reproduction GO:0000003 40 0.021
Worm Fly
nuclear envelope organization GO:0006998 2 0.021
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.021
macromolecular complex disassembly GO:0032984 1 0.021
rna biosynthetic process GO:0032774 181 0.021
cellular macromolecule biosynthetic process GO:0034645 224 0.021
regulation of cellular protein metabolic process GO:0032268 52 0.021
cellular nitrogen compound metabolic process GO:0034641 290 0.021
Fly
positive regulation of cellular metabolic process GO:0031325 94 0.021
anterior posterior pattern specification GO:0009952 152 0.021
negative regulation of metabolic process GO:0009892 86 0.021
rna processing GO:0006396 25 0.020
Fly
male meiosis GO:0007140 2 0.020
determination of bilateral symmetry GO:0009855 204 0.020
meiosis i GO:0007127 1 0.020
meiotic spindle organization GO:0000212 1 0.020
stem cell differentiation GO:0048863 117 0.020
phosphate containing compound metabolic process GO:0006796 108 0.020
cellular component disassembly GO:0022411 1 0.020
posttranscriptional gene silencing by rna GO:0035194 3 0.020
meiotic cell cycle process GO:1903046 3 0.020
positive regulation of carbohydrate metabolic process GO:0045913 1 0.020
positive regulation of protein metabolic process GO:0051247 23 0.019
protein complex disassembly GO:0043241 1 0.019
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.019
cellular respiration GO:0045333 3 0.019
regulation of macromolecule biosynthetic process GO:0010556 225 0.019
positive regulation of cellular component biogenesis GO:0044089 3 0.019
small molecule metabolic process GO:0044281 77 0.019
regulation of intracellular signal transduction GO:1902531 57 0.019
positive regulation of cellular carbohydrate metabolic process GO:0010676 1 0.018
positive regulation of transport GO:0051050 2 0.018
organelle assembly GO:0070925 110 0.018
oocyte anterior posterior axis specification GO:0007314 4 0.018
regulation of carbohydrate metabolic process GO:0006109 4 0.018
cellular carbohydrate metabolic process GO:0044262 4 0.018
intracellular mrna localization GO:0008298 1 0.017
single organism reproductive process GO:0044702 40 0.017
Worm Fly
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.017
nuclear migration GO:0007097 3 0.017
regulation of localization GO:0032879 104 0.017
positive regulation of cellular process GO:0048522 201 0.017
regulation of cellular amino acid metabolic process GO:0006521 0 0.017
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.016
positive regulation of dna metabolic process GO:0051054 1 0.016
neuron projection morphogenesis GO:0048812 161 0.016
Worm
cellular component biogenesis GO:0044085 178 0.016
Fly
regulation of stem cell differentiation GO:2000736 4 0.016
g2 m transition of mitotic cell cycle GO:0000086 4 0.016
rna transport GO:0050658 2 0.016
peptidyl lysine acetylation GO:0018394 2 0.016
embryonic organ development GO:0048568 381 0.016
cytoskeleton organization GO:0007010 96 0.016
negative regulation of biosynthetic process GO:0009890 55 0.015
regulation of reproductive process GO:2000241 4 0.015
cellular nitrogen compound biosynthetic process GO:0044271 218 0.015
proteolysis GO:0006508 38 0.015
cell fate specification GO:0001708 68 0.015
chromosome organization GO:0051276 31 0.015
camera type eye development GO:0043010 222 0.015
negative regulation of transcription dna templated GO:0045892 45 0.015
response to corticosteroid GO:0031960 1 0.015
regulation of multicellular organism growth GO:0040014 4 0.015
regulation of cellular amine metabolic process GO:0033238 0 0.015
ribonucleoprotein complex subunit organization GO:0071826 8 0.015
Fly
fertilization GO:0009566 3 0.015
amine metabolic process GO:0009308 2 0.015
negative regulation of rna metabolic process GO:0051253 48 0.015
positive regulation of gene expression GO:0010628 71 0.015
peptidyl lysine monomethylation GO:0018026 1 0.014
negative regulation of cellular metabolic process GO:0031324 77 0.014
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.014
posttranscriptional regulation of gene expression GO:0010608 14 0.014
regulation of protein metabolic process GO:0051246 56 0.014
homeostatic process GO:0042592 142 0.014
head development GO:0060322 303 0.014
establishment of rna localization GO:0051236 3 0.014
gene silencing GO:0016458 4 0.014
regulation of nucleocytoplasmic transport GO:0046822 2 0.014
protein polyubiquitination GO:0000209 4 0.014
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
germ line stem cell maintenance GO:0030718 2 0.014
positive regulation of glial cell differentiation GO:0045687 1 0.014
embryonic organ morphogenesis GO:0048562 274 0.014
regulation of cell morphogenesis involved in differentiation GO:0010769 38 0.013
positive regulation of embryonic development GO:0040019 3 0.013
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.013
single organism cellular localization GO:1902580 46 0.013
ribonucleoprotein complex biogenesis GO:0022613 13 0.013
Fly
phagocytosis GO:0006909 3 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
transcription from rna polymerase ii promoter GO:0006366 80 0.013
negative regulation of developmental process GO:0051093 65 0.013
protein modification process GO:0036211 100 0.013
protein localization to nucleus GO:0034504 3 0.012
skeletal system development GO:0001501 181 0.012
cellular component morphogenesis GO:0032989 336 0.012
Worm
regulation of synapse assembly GO:0051963 3 0.012
internal protein amino acid acetylation GO:0006475 2 0.012
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.012
mesenchymal cell differentiation GO:0048762 87 0.012
cellular amino acid metabolic process GO:0006520 7 0.012
lateral inhibition GO:0046331 1 0.012
regulation of translational initiation GO:0006446 1 0.012
muscle structure development GO:0061061 196 0.012
positive regulation of chromosome organization GO:2001252 1 0.012
negative regulation of rna splicing GO:0033119 1 0.012
chromatin organization GO:0006325 22 0.012
mitochondrial transport GO:0006839 2 0.012
response to uv GO:0009411 3 0.011
neuron development GO:0048666 262 0.011
Worm
single fertilization GO:0007338 3 0.011
regulation of organelle organization GO:0033043 29 0.011
Worm
response to external stimulus GO:0009605 264 0.011
Worm
phosphorylation GO:0016310 69 0.011
negative regulation of rna biosynthetic process GO:1902679 45 0.011
rna polyadenylation GO:0043631 2 0.011
regulation of cytoplasmic transport GO:1903649 4 0.011
positive regulation of chromatin modification GO:1903310 1 0.011
negative regulation of epithelial to mesenchymal transition GO:0010719 1 0.011
embryonic limb morphogenesis GO:0030326 2 0.011
response to temperature stimulus GO:0009266 15 0.011
nucleus organization GO:0006997 7 0.011
negative regulation of chromosome organization GO:2001251 1 0.011
regulation of cell cycle GO:0051726 52 0.011
Worm Fly
dendrite guidance GO:0070983 0 0.011
negative regulation of multi organism process GO:0043901 3 0.011
cell cycle g2 m phase transition GO:0044839 4 0.011
energy derivation by oxidation of organic compounds GO:0015980 5 0.011
heart development GO:0007507 313 0.011
regulation of cell activation GO:0050865 1 0.010
cell migration GO:0016477 237 0.010
embryonic digestive tract morphogenesis GO:0048557 3 0.010
lymphatic endothelial cell differentiation GO:0060836 1 0.010
mesenchyme development GO:0060485 127 0.010
cellular response to stress GO:0033554 62 0.010
single organism metabolic process GO:0044710 217 0.010

puf60b disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
cancer DOID:162 0 0.026
disease of cellular proliferation DOID:14566 0 0.026
organ system cancer DOID:0050686 0 0.026
disease of mental health DOID:150 0 0.010
developmental disorder of mental health DOID:0060037 0 0.010