Danio rerio

0 known processes

rcn3

reticulocalbin 3, EF-hand calcium binding domain

(Aliases: zgc:86646)

rcn3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
collagen metabolic process GO:0032963 2 0.452
aging GO:0007568 2 0.364
Worm
regulation of multicellular organismal process GO:0051239 277 0.251
response to chemical GO:0042221 320 0.233
larval development GO:0002164 2 0.181
Worm
multicellular organismal metabolic process GO:0044236 2 0.181
ameboidal type cell migration GO:0001667 143 0.168
regulation of catenin import into nucleus GO:0035412 2 0.160
regulation of epithelial cell proliferation GO:0050678 3 0.160
extracellular structure organization GO:0043062 27 0.147
multicellular organismal macromolecule metabolic process GO:0044259 2 0.121
cell migration GO:0016477 237 0.107
extrinsic apoptotic signaling pathway GO:0097191 3 0.104
negative regulation of cellular process GO:0048523 283 0.102
heart development GO:0007507 313 0.094
chondrocyte development GO:0002063 4 0.088
multicellular organism growth GO:0035264 4 0.078
phagocytosis GO:0006909 3 0.077
negative regulation of epithelial cell proliferation GO:0050680 1 0.075
regulation of chondrocyte differentiation GO:0032330 1 0.072
cellular component movement GO:0006928 335 0.070
eye field cell fate commitment involved in camera type eye formation GO:0060898 3 0.068
cartilage development GO:0051216 96 0.068
cell motility GO:0048870 244 0.067
single organism metabolic process GO:0044710 217 0.059
cartilage condensation GO:0001502 3 0.058
response to organic substance GO:0010033 153 0.055
sprouting angiogenesis GO:0002040 53 0.053
neuron projection development GO:0031175 180 0.052
response to stress GO:0006950 263 0.051
skeletal system development GO:0001501 181 0.050
chordate embryonic development GO:0043009 271 0.048
angiogenesis GO:0001525 158 0.047
response to vitamin GO:0033273 3 0.045
biosynthetic process GO:0009058 294 0.045
cell proliferation GO:0008283 80 0.044
single organism reproductive process GO:0044702 40 0.040
sensory organ development GO:0007423 393 0.040
gland development GO:0048732 143 0.039
regulation of reproductive process GO:2000241 4 0.038
cellular response to external stimulus GO:0071496 2 0.038
regulation of multicellular organism growth GO:0040014 4 0.037
negative regulation of biological process GO:0048519 304 0.037
protein localization to nucleus GO:0034504 3 0.034
ceramide biosynthetic process GO:0046513 1 0.032
lipid storage GO:0019915 1 0.032
positive regulation of translation GO:0045727 1 0.031
cellular macromolecule metabolic process GO:0044260 391 0.031
vasculature development GO:0001944 278 0.031
eye morphogenesis GO:0048592 144 0.030
carboxylic acid metabolic process GO:0019752 22 0.030
negative regulation of reproductive process GO:2000242 3 0.029
regulation of cell shape GO:0008360 1 0.029
regulation of response to stimulus GO:0048583 269 0.028
collagen fibril organization GO:0030199 1 0.027
regulation of cytokine production GO:0001817 3 0.027
specification of symmetry GO:0009799 204 0.027
regulation of signal transduction GO:0009966 225 0.027
response to organic cyclic compound GO:0014070 51 0.026
heterocycle biosynthetic process GO:0018130 215 0.026
negative regulation of signal transduction GO:0009968 94 0.026
positive regulation of developmental process GO:0051094 50 0.026
mesodermal cell migration GO:0008078 12 0.026
regulation of establishment of protein localization GO:0070201 4 0.026
organic substance biosynthetic process GO:1901576 289 0.026
direct ossification GO:0036072 3 0.026
cellular amino acid metabolic process GO:0006520 7 0.026
positive regulation of chromosome organization GO:2001252 1 0.026
primary neural tube formation GO:0014020 1 0.026
immune system process GO:0002376 241 0.026
response to wounding GO:0009611 116 0.026
extracellular matrix organization GO:0030198 27 0.025
locomotion GO:0040011 313 0.025
Worm
mesenchymal cell differentiation GO:0048762 87 0.024
regulation of binding GO:0051098 3 0.024
maintenance of location GO:0051235 4 0.024
oxoacid metabolic process GO:0043436 31 0.024
connective tissue development GO:0061448 99 0.023
muscle cell development GO:0055001 115 0.023
cellular response to vitamin GO:0071295 1 0.023
heart morphogenesis GO:0003007 156 0.023
regulation of protein transport GO:0051223 3 0.022
regeneration GO:0031099 91 0.022
outflow tract morphogenesis GO:0003151 1 0.022
germ line stem cell maintenance GO:0030718 2 0.022
response to nutrient GO:0007584 3 0.022
cellular component assembly GO:0022607 170 0.022
regulation of cytoplasmic transport GO:1903649 4 0.022
neural crest cell development GO:0014032 62 0.022
skeletal system morphogenesis GO:0048705 102 0.022
positive regulation of lipase activity GO:0060193 1 0.021
chromatin organization GO:0006325 22 0.021
regulation of cellular amine metabolic process GO:0033238 0 0.021
positive regulation of cell adhesion GO:0045785 1 0.021
embryonic organ development GO:0048568 381 0.021
regulation of cell activation GO:0050865 1 0.021
regulation of response to external stimulus GO:0032101 31 0.021
regulation of macromolecule biosynthetic process GO:0010556 225 0.020
single organism biosynthetic process GO:0044711 71 0.020
regulation of protein import into nucleus GO:0042306 2 0.020
golgi vesicle transport GO:0048193 3 0.020
cellular response to extracellular stimulus GO:0031668 2 0.020
mesenchymal cell development GO:0014031 78 0.020
cellular response to nutrient levels GO:0031669 2 0.019
cellular component morphogenesis GO:0032989 336 0.019
regulation of intracellular protein transport GO:0033157 3 0.019
blood vessel development GO:0001568 246 0.019
regulation of cellular biosynthetic process GO:0031326 245 0.019
regulation of anatomical structure morphogenesis GO:0022603 130 0.019
regulation of signaling GO:0023051 235 0.019
positive regulation of cytokine production GO:0001819 2 0.019
peptide transport GO:0015833 1 0.019
regulation of cellular amino acid metabolic process GO:0006521 0 0.019
positive regulation of chromatin modification GO:1903310 1 0.019
determination of left right symmetry GO:0007368 179 0.018
tight junction assembly GO:0070830 1 0.018
cellular component biogenesis GO:0044085 178 0.018
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.018
activation of mapk activity GO:0000187 3 0.017
bleb assembly GO:0032060 1 0.017
cell morphogenesis GO:0000902 289 0.017
nitrogen compound metabolic process GO:0006807 319 0.017
camera type eye morphogenesis GO:0048593 108 0.017
cellular response to lipid GO:0071396 39 0.017
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.017
membrane lipid biosynthetic process GO:0046467 2 0.017
regulation of protein localization to nucleus GO:1900180 2 0.017
central nervous system development GO:0007417 387 0.017
cellular ketone metabolic process GO:0042180 11 0.017
protein import GO:0017038 3 0.017
positive regulation of transport GO:0051050 2 0.017
amine metabolic process GO:0009308 2 0.017
embryo development ending in birth or egg hatching GO:0009792 271 0.016
bone mineralization GO:0030282 9 0.016
collagen biosynthetic process GO:0032964 2 0.016
urogenital system development GO:0001655 97 0.016
cellular protein metabolic process GO:0044267 129 0.016
lateral inhibition GO:0046331 1 0.016
sensory organ morphogenesis GO:0090596 200 0.016
negative chemotaxis GO:0050919 1 0.016
eye development GO:0001654 277 0.016
cellular response to lipopolysaccharide GO:0071222 3 0.016
epithelial cell migration GO:0010631 25 0.016
muscle organ development GO:0007517 101 0.016
response to metal ion GO:0010038 34 0.016
blood vessel morphogenesis GO:0048514 216 0.016
transport GO:0006810 220 0.016
stem cell proliferation GO:0072089 4 0.015
localization of cell GO:0051674 244 0.015
regulation of bone mineralization GO:0030500 2 0.015
regulation of developmental process GO:0050793 247 0.015
negative regulation of chemotaxis GO:0050922 4 0.015
regulation of biological quality GO:0065008 263 0.015
cell aging GO:0007569 2 0.015
developmental growth GO:0048589 166 0.014
wound healing GO:0042060 90 0.014
response to lipid GO:0033993 60 0.014
cellular biosynthetic process GO:0044249 286 0.014
camera type eye development GO:0043010 222 0.014
spinal cord radial glial cell differentiation GO:0021531 2 0.014
nuclear import GO:0051170 3 0.014
positive regulation of map kinase activity GO:0043406 3 0.014
notochord development GO:0030903 54 0.014
signal transduction GO:0007165 455 0.014
organonitrogen compound metabolic process GO:1901564 74 0.014
response to abiotic stimulus GO:0009628 122 0.014
cellular response to nutrient GO:0031670 1 0.014
regulation of nucleocytoplasmic transport GO:0046822 2 0.014
neuron development GO:0048666 262 0.014
cellular component disassembly GO:0022411 1 0.013
cell surface receptor signaling pathway GO:0007166 325 0.013
regulation of hormone secretion GO:0046883 2 0.013
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.013
sympathetic ganglion development GO:0061549 2 0.013
response to endogenous stimulus GO:0009719 83 0.013
somite development GO:0061053 96 0.013
stem cell development GO:0048864 82 0.013
establishment of protein localization to organelle GO:0072594 4 0.013
muscle structure development GO:0061061 196 0.013
epidermis morphogenesis GO:0048730 4 0.013
response to hormone GO:0009725 48 0.013
nucleic acid templated transcription GO:0097659 181 0.013
protein heterooligomerization GO:0051291 1 0.013
axon development GO:0061564 166 0.012
positive regulation of signaling GO:0023056 56 0.012
cellular response to unfolded protein GO:0034620 2 0.012
tube closure GO:0060606 1 0.012
cell morphogenesis involved in differentiation GO:0000904 195 0.012
regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:2001239 1 0.012
regulation of multicellular organismal development GO:2000026 223 0.012
positive regulation of multicellular organismal process GO:0051240 52 0.012
negative regulation of signal transduction in absence of ligand GO:1901099 1 0.012
positive regulation of histone modification GO:0031058 1 0.012
stem cell differentiation GO:0048863 117 0.012
biomineral tissue development GO:0031214 13 0.012
organic acid metabolic process GO:0006082 31 0.012
protein metabolic process GO:0019538 183 0.012
pericardium morphogenesis GO:0003344 1 0.012
mesenchyme development GO:0060485 127 0.012
positive regulation of apoptotic signaling pathway GO:2001235 1 0.012
negative regulation of signaling GO:0023057 96 0.012
response to estrogen GO:0043627 27 0.012
head development GO:0060322 303 0.011
rna localization GO:0006403 4 0.011
cellular modified amino acid metabolic process GO:0006575 3 0.011
response to amino acid GO:0043200 2 0.011
i kappab kinase nf kappab signaling GO:0007249 4 0.011
intramembranous ossification GO:0001957 3 0.011
canonical wnt signaling pathway GO:0060070 48 0.011
endothelial cell migration GO:0043542 19 0.011
embryonic viscerocranium morphogenesis GO:0048703 52 0.011
regulation of intracellular signal transduction GO:1902531 57 0.011
growth GO:0040007 174 0.011
regulation of cellular ketone metabolic process GO:0010565 7 0.011
regulation of protein targeting GO:1903533 2 0.011
system process GO:0003008 185 0.011
membrane invagination GO:0010324 1 0.011
regulation of cell proliferation GO:0042127 37 0.011
single organism localization GO:1902578 225 0.011
hormone secretion GO:0046879 2 0.011
cell projection morphogenesis GO:0048858 244 0.011
embryonic skeletal system development GO:0048706 97 0.011
negative regulation of metabolic process GO:0009892 86 0.011
regulation of transport GO:0051049 45 0.010
immune system development GO:0002520 191 0.010
negative regulation of dna metabolic process GO:0051053 4 0.010
cellular response to chemical stimulus GO:0070887 157 0.010
positive regulation of cell activation GO:0050867 1 0.010
cellular response to stress GO:0033554 62 0.010
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.010
regulation of synapse assembly GO:0051963 3 0.010
determination of heart left right asymmetry GO:0061371 117 0.010
alcohol biosynthetic process GO:0046165 2 0.010
cell projection assembly GO:0030031 64 0.010
regulation of biosynthetic process GO:0009889 250 0.010
regulation of blood vessel size GO:0050880 2 0.010
epithelial cell proliferation GO:0050673 17 0.010
extracellular matrix constituent secretion GO:0070278 3 0.010
cell aggregation GO:0098743 3 0.010
regulation of erk1 and erk2 cascade GO:0070372 4 0.010

rcn3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.197
musculoskeletal system disease DOID:17 0 0.138
osteochondrodysplasia DOID:2256 0 0.138
bone development disease DOID:0080006 0 0.138
bone disease DOID:0080001 0 0.138
connective tissue disease DOID:65 0 0.138
osteogenesis imperfecta DOID:12347 0 0.021
nervous system disease DOID:863 0 0.018
eye and adnexa disease DOID:1492 0 0.010
eye disease DOID:5614 0 0.010
sensory system disease DOID:0050155 0 0.010