Danio rerio

0 known processes

rif1

RAP1 interacting factor homolog (yeast)

(Aliases: wu:fc38c03,si:dkey-89p3.2,fc38c03)

rif1 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
positive regulation of histone modification GO:0031058 1 0.310
positive regulation of chromatin modification GO:1903310 1 0.246
cellular biosynthetic process GO:0044249 286 0.179
regulation of histone h3 k9 methylation GO:0051570 2 0.165
positive regulation of cellular component biogenesis GO:0044089 3 0.163
cellular aromatic compound metabolic process GO:0006725 295 0.141
nucleobase containing compound metabolic process GO:0006139 274 0.139
cellular nitrogen compound metabolic process GO:0034641 290 0.120
amine metabolic process GO:0009308 2 0.107
histone h4 k20 methylation GO:0034770 2 0.107
cognition GO:0050890 1 0.104
methylation GO:0032259 22 0.103
peptidyl lysine trimethylation GO:0018023 1 0.096
nucleic acid metabolic process GO:0090304 244 0.094
regulation of histone methylation GO:0031060 3 0.092
histone h3 k36 methylation GO:0010452 2 0.091
positive regulation of lymphocyte mediated immunity GO:0002708 1 0.091
histone h3 k4 methylation GO:0051568 2 0.088
protein acetylation GO:0006473 2 0.087
skeletal system development GO:0001501 181 0.086
peptidyl lysine acetylation GO:0018394 2 0.086
organic substance biosynthetic process GO:1901576 289 0.085
regulation of metabolic process GO:0019222 359 0.085
cellular amine metabolic process GO:0044106 2 0.083
regulation of macromolecule metabolic process GO:0060255 317 0.083
negative regulation of ras protein signal transduction GO:0046580 1 0.081
histone methylation GO:0016571 13 0.080
cellular ketone metabolic process GO:0042180 11 0.080
internal protein amino acid acetylation GO:0006475 2 0.075
protein methylation GO:0006479 13 0.075
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.074
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.074
regulation of cell activation GO:0050865 1 0.074
regulation of chromatin modification GO:1903308 5 0.069
larval development GO:0002164 2 0.067
histone h3 k9 methylation GO:0051567 5 0.067
cell cycle GO:0007049 93 0.067
regulation of nucleic acid templated transcription GO:1903506 213 0.066
positive regulation of cellular amine metabolic process GO:0033240 0 0.066
positive regulation of chromosome organization GO:2001252 1 0.065
g1 s transition of mitotic cell cycle GO:0000082 1 0.065
cellular macromolecule biosynthetic process GO:0034645 224 0.061
nitrogen compound metabolic process GO:0006807 319 0.061
heterocycle metabolic process GO:0046483 290 0.060
aging GO:0007568 2 0.060
multicellular organism growth GO:0035264 4 0.060
histone h3 k9 modification GO:0061647 5 0.059
organic cyclic compound metabolic process GO:1901360 301 0.057
macromolecule biosynthetic process GO:0009059 227 0.056
organelle organization GO:0006996 227 0.056
regulation of multicellular organism growth GO:0040014 4 0.055
regulation of protein complex assembly GO:0043254 3 0.055
regulation of nitrogen compound metabolic process GO:0051171 251 0.055
biosynthetic process GO:0009058 294 0.055
aromatic compound biosynthetic process GO:0019438 217 0.055
regulation of establishment of protein localization GO:0070201 4 0.054
organic acid metabolic process GO:0006082 31 0.054
cellular macromolecule metabolic process GO:0044260 391 0.053
b cell activation GO:0042113 2 0.052
translational initiation GO:0006413 3 0.052
regulation of gene expression GO:0010468 265 0.049
internal peptidyl lysine acetylation GO:0018393 2 0.048
regulation of cellular ketone metabolic process GO:0010565 7 0.048
regulation of cellular metabolic process GO:0031323 320 0.048
regulation of developmental process GO:0050793 247 0.046
Mouse
centrosome organization GO:0051297 1 0.045
mitotic cell cycle process GO:1903047 48 0.045
immunoglobulin mediated immune response GO:0016064 3 0.044
non recombinational repair GO:0000726 2 0.044
positive regulation of protein complex assembly GO:0031334 2 0.043
dna alkylation GO:0006305 8 0.043
dna modification GO:0006304 8 0.042
digestive system development GO:0055123 289 0.041
positive regulation of immune effector process GO:0002699 3 0.041
organic cyclic compound biosynthetic process GO:1901362 223 0.040
histone lysine methylation GO:0034968 12 0.040
g2 dna damage checkpoint GO:0031572 3 0.040
embryo development ending in birth or egg hatching GO:0009792 271 0.039
covalent chromatin modification GO:0016569 20 0.039
macromolecule methylation GO:0043414 19 0.039
gene expression GO:0010467 252 0.039
mitotic dna integrity checkpoint GO:0044774 4 0.039
growth GO:0040007 174 0.038
immune system process GO:0002376 241 0.037
establishment of localization GO:0051234 244 0.037
oxoacid metabolic process GO:0043436 31 0.037
regulation of gene expression epigenetic GO:0040029 11 0.037
positive regulation of cell activation GO:0050867 1 0.036
nucleobase containing compound biosynthetic process GO:0034654 205 0.034
negative regulation of biological process GO:0048519 304 0.034
Mouse
microtubule organizing center organization GO:0031023 1 0.034
meiotic chromosome segregation GO:0045132 3 0.034
single organism metabolic process GO:0044710 217 0.034
small molecule metabolic process GO:0044281 77 0.033
digestive tract development GO:0048565 265 0.033
single organism organelle organization GO:1902589 199 0.033
cellular nitrogen compound biosynthetic process GO:0044271 218 0.033
positive regulation of cellular process GO:0048522 201 0.033
protein acylation GO:0043543 3 0.033
mitotic dna damage checkpoint GO:0044773 4 0.032
macromolecular complex subunit organization GO:0043933 74 0.032
macromolecule modification GO:0043412 111 0.032
homeostatic process GO:0042592 142 0.032
regulation of macromolecule biosynthetic process GO:0010556 225 0.031
regulation of dna recombination GO:0000018 2 0.031
lymphocyte mediated immunity GO:0002449 5 0.031
chromatin modification GO:0016568 21 0.031
positive regulation of cell cycle GO:0045787 3 0.030
rna metabolic process GO:0016070 219 0.030
positive regulation of transport GO:0051050 2 0.030
response to chemical GO:0042221 320 0.030
cytokinesis GO:0000910 3 0.030
regulation of cellular amine metabolic process GO:0033238 0 0.029
cell morphogenesis GO:0000902 289 0.029
protein alkylation GO:0008213 13 0.029
b cell mediated immunity GO:0019724 3 0.029
response to light stimulus GO:0009416 46 0.028
meiotic cell cycle process GO:1903046 3 0.028
signal transduction GO:0007165 455 0.027
cellular component biogenesis GO:0044085 178 0.027
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.027
regulation of microtubule cytoskeleton organization GO:0070507 3 0.027
chromosome organization GO:0051276 31 0.027
locomotion GO:0040011 313 0.027
rna biosynthetic process GO:0032774 181 0.027
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.026
regulation of protein targeting GO:1903533 2 0.026
positive regulation of dna metabolic process GO:0051054 1 0.026
regulation of protein metabolic process GO:0051246 56 0.026
transcription dna templated GO:0006351 181 0.026
multi organism process GO:0051704 134 0.025
cell cycle g1 s phase transition GO:0044843 1 0.025
response to amino acid GO:0043200 2 0.025
apoptotic process GO:0006915 116 0.025
immune system development GO:0002520 191 0.025
macromolecular complex disassembly GO:0032984 1 0.024
peptidyl lysine methylation GO:0018022 3 0.024
regulation of response to stimulus GO:0048583 269 0.024
sister chromatid cohesion GO:0007062 2 0.024
mitotic g2 m transition checkpoint GO:0044818 3 0.024
regulation of biosynthetic process GO:0009889 250 0.024
cell cycle process GO:0022402 53 0.024
negative regulation of dna metabolic process GO:0051053 4 0.023
regionalization GO:0003002 274 0.023
negative regulation of transcription dna templated GO:0045892 45 0.023
negative regulation of cellular process GO:0048523 283 0.023
Mouse
response to abiotic stimulus GO:0009628 122 0.023
negative regulation of gene expression GO:0010629 65 0.023
reciprocal dna recombination GO:0035825 1 0.023
g2 m transition of mitotic cell cycle GO:0000086 4 0.022
cellular amino acid metabolic process GO:0006520 7 0.022
positive regulation of biological process GO:0048518 253 0.022
transcription from rna polymerase ii promoter GO:0006366 80 0.022
cellular component disassembly GO:0022411 1 0.022
segmentation GO:0035282 97 0.022
localization of cell GO:0051674 244 0.021
regulation of production of molecular mediator of immune response GO:0002700 1 0.021
mitotic cell cycle embryonic GO:0045448 2 0.021
programmed cell death GO:0012501 119 0.021
rna catabolic process GO:0006401 7 0.021
response to drug GO:0042493 3 0.021
cell migration GO:0016477 237 0.021
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.021
heterocycle biosynthetic process GO:0018130 215 0.021
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.021
regulation of cellular amino acid metabolic process GO:0006521 0 0.020
cellular component movement GO:0006928 335 0.020
regulation of cellular biosynthetic process GO:0031326 245 0.020
response to radiation GO:0009314 51 0.020
modification dependent protein catabolic process GO:0019941 3 0.020
chemosensory behavior GO:0007635 1 0.020
rna localization GO:0006403 4 0.020
regulation of chromatin organization GO:1902275 5 0.020
nuclear pore organization GO:0006999 2 0.020
neurological system process GO:0050877 62 0.020
carboxylic acid metabolic process GO:0019752 22 0.020
regulation of biological quality GO:0065008 263 0.020
regulation of histone modification GO:0031056 5 0.020
maintenance of location GO:0051235 4 0.020
regulation of protein transport GO:0051223 3 0.019
somatic cell dna recombination GO:0016444 1 0.019
regulation of dna replication GO:0006275 3 0.019
cellular component assembly GO:0022607 170 0.019
protein complex localization GO:0031503 1 0.019
response to organic substance GO:0010033 153 0.019
negative regulation of chromatin modification GO:1903309 1 0.018
protein metabolic process GO:0019538 183 0.018
regulation of mitotic cell cycle GO:0007346 25 0.018
regulation of primary metabolic process GO:0080090 311 0.018
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.017
negative regulation of macromolecule metabolic process GO:0010605 76 0.017
system process GO:0003008 185 0.017
tube morphogenesis GO:0035239 349 0.017
regulation of dna metabolic process GO:0051052 11 0.017
positive regulation of protein metabolic process GO:0051247 23 0.017
response to endogenous stimulus GO:0009719 83 0.017
macromolecular complex assembly GO:0065003 35 0.016
regulation of programmed cell death GO:0043067 101 0.016
autophagy GO:0006914 4 0.016
developmental growth GO:0048589 166 0.016
mitotic g2 dna damage checkpoint GO:0007095 3 0.016
regulation of protein import into nucleus GO:0042306 2 0.016
peptidyl threonine phosphorylation GO:0018107 1 0.016
reciprocal meiotic recombination GO:0007131 1 0.016
synaptic growth at neuromuscular junction GO:0051124 2 0.016
spindle assembly GO:0051225 2 0.016
regulation of glucose transport GO:0010827 1 0.016
peptidyl lysine dimethylation GO:0018027 1 0.015
protein complex disassembly GO:0043241 1 0.015
regulation of multicellular organismal process GO:0051239 277 0.015
hemopoiesis GO:0030097 183 0.015
regulation of leukocyte mediated immunity GO:0002703 1 0.015
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.015
cell substrate adhesion GO:0031589 4 0.015
dna methylation GO:0006306 8 0.015
small gtpase mediated signal transduction GO:0007264 8 0.015
rna stabilization GO:0043489 4 0.015
cellular protein metabolic process GO:0044267 129 0.015
cellular response to external stimulus GO:0071496 2 0.015
double strand break repair GO:0006302 3 0.015
regulation of synapse assembly GO:0051963 3 0.015
phagocytosis GO:0006909 3 0.014
regulation of signaling GO:0023051 235 0.014
regulation of rna biosynthetic process GO:2001141 213 0.014
anterior posterior pattern specification GO:0009952 152 0.014
chromatin organization GO:0006325 22 0.014
cellular response to dna damage stimulus GO:0006974 24 0.014
production of molecular mediator of immune response GO:0002440 2 0.014
cell death GO:0008219 121 0.014
cellular localization GO:0051641 97 0.014
cellular response to chemical stimulus GO:0070887 157 0.014
positive regulation of metabolic process GO:0009893 108 0.014
cilium morphogenesis GO:0060271 85 0.013
response to corticosteroid GO:0031960 1 0.013
response to monosaccharide GO:0034284 3 0.013
nucleic acid templated transcription GO:0097659 181 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
rna polyadenylation GO:0043631 2 0.013
cellular component morphogenesis GO:0032989 336 0.013
nuclear transport GO:0051169 4 0.013
dorsal ventral pattern formation GO:0009953 125 0.013
response to carbohydrate GO:0009743 3 0.013
regulation of cellular protein metabolic process GO:0032268 52 0.013
cellular response to endogenous stimulus GO:0071495 68 0.013
regulation of gene silencing GO:0060968 1 0.013
mrna metabolic process GO:0016071 20 0.013
nuclear migration GO:0007097 3 0.013
cell cycle g2 m phase transition GO:0044839 4 0.013
regulation of protein ubiquitination GO:0031396 3 0.013
centrosome cycle GO:0007098 1 0.013
cell cycle phase transition GO:0044770 9 0.013
cell motility GO:0048870 244 0.012
cellular response to extracellular stimulus GO:0031668 2 0.012
dna metabolic process GO:0006259 27 0.012
regulation of protein localization to nucleus GO:1900180 2 0.012
regulation of dna methylation GO:0044030 5 0.012
leukocyte proliferation GO:0070661 1 0.012
chordate embryonic development GO:0043009 271 0.012
cytoskeleton organization GO:0007010 96 0.012
regulation of rna metabolic process GO:0051252 224 0.012
cellular response to oxygen levels GO:0071453 1 0.012
gene silencing GO:0016458 4 0.012
meiotic nuclear division GO:0007126 4 0.012
positive regulation of leukocyte mediated immunity GO:0002705 1 0.012
protein targeting to nucleus GO:0044744 3 0.012
ovulation cycle process GO:0022602 2 0.012
negative regulation of signal transduction GO:0009968 94 0.012
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.012
mrna 3 end processing GO:0031124 2 0.012
transport GO:0006810 220 0.012
myeloid cell differentiation GO:0030099 86 0.012
regulation of cell cycle GO:0051726 52 0.012
response to nutrient GO:0007584 3 0.011
lipid storage GO:0019915 1 0.011
cellular response to starvation GO:0009267 1 0.011
establishment of rna localization GO:0051236 3 0.011
cell cycle arrest GO:0007050 1 0.011
primary neural tube formation GO:0014020 1 0.011
regulation of meiotic cell cycle GO:0051445 1 0.011
response to nitrogen compound GO:1901698 19 0.011
negative regulation of dna replication GO:0008156 2 0.011
negative regulation of histone modification GO:0031057 1 0.011
regulation of carbohydrate metabolic process GO:0006109 4 0.011
regulation of synapse organization GO:0050807 3 0.011
response to glucocorticoid GO:0051384 1 0.011
death GO:0016265 121 0.011
positive regulation of carbohydrate metabolic process GO:0045913 1 0.011
regulation of cell death GO:0010941 103 0.011
centrosome duplication GO:0051298 1 0.011
leukocyte mediated cytotoxicity GO:0001909 1 0.011
immunoglobulin production GO:0002377 1 0.011
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.011
regulation of stem cell proliferation GO:0072091 2 0.011
erythrocyte differentiation GO:0030218 54 0.011
multi organism reproductive process GO:0044703 36 0.010
single organism localization GO:1902578 225 0.010
digestive tract morphogenesis GO:0048546 231 0.010
positive regulation of cellular protein metabolic process GO:0032270 22 0.010
cellular carbohydrate metabolic process GO:0044262 4 0.010
retina development in camera type eye GO:0060041 146 0.010
cellular component assembly involved in morphogenesis GO:0010927 107 0.010
hematopoietic stem cell migration GO:0035701 4 0.010
regulation of dna templated transcription in response to stress GO:0043620 0 0.010
reproductive process GO:0022414 40 0.010
homeostasis of number of cells within a tissue GO:0048873 4 0.010

rif1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.076
nervous system disease DOID:863 0 0.051
disease of metabolism DOID:0014667 0 0.012