Danio rerio

40 known processes

rnpc3

RNA-binding region (RNP1, RRM) containing 3

(Aliases: zgc:136847,MGC136847)

rnpc3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.480
meiotic nuclear division GO:0007126 4 0.227
tube morphogenesis GO:0035239 349 0.140
stem cell proliferation GO:0072089 4 0.136
cellular macromolecule metabolic process GO:0044260 391 0.134
digestive tract development GO:0048565 265 0.118
digestive tract morphogenesis GO:0048546 231 0.115
digestive system development GO:0055123 289 0.114
regulation of multicellular organism growth GO:0040014 4 0.107
organic cyclic compound metabolic process GO:1901360 301 0.098
protein polymerization GO:0051258 4 0.088
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.087
regulation of biological quality GO:0065008 263 0.085
generation of neurons GO:0048699 385 0.082
sensory organ development GO:0007423 393 0.079
neuron projection development GO:0031175 180 0.077
single organism nuclear import GO:1902593 3 0.073
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.071
regulation of primary metabolic process GO:0080090 311 0.071
cellular nitrogen compound metabolic process GO:0034641 290 0.070
homeostatic process GO:0042592 142 0.069
multicellular organism growth GO:0035264 4 0.065
heterocycle metabolic process GO:0046483 290 0.064
rna processing GO:0006396 25 0.063
cellular protein catabolic process GO:0044257 4 0.061
cell motility GO:0048870 244 0.060
nucleic acid metabolic process GO:0090304 244 0.058
morphogenesis of an epithelium GO:0002009 333 0.057
cellular component morphogenesis GO:0032989 336 0.057
organelle organization GO:0006996 227 0.056
stem cell division GO:0017145 1 0.054
cellular aromatic compound metabolic process GO:0006725 295 0.054
gastrulation GO:0007369 208 0.053
cell morphogenesis involved in differentiation GO:0000904 195 0.052
positive regulation of cellular catabolic process GO:0031331 3 0.052
negative regulation of chromosome organization GO:2001251 1 0.052
meiotic cell cycle process GO:1903046 3 0.051
regulation of epithelial cell proliferation GO:0050678 3 0.050
neuroblast proliferation GO:0007405 2 0.050
protein localization to nucleus GO:0034504 3 0.049
positive regulation of cellular component biogenesis GO:0044089 3 0.049
regulation of response to nutrient levels GO:0032107 1 0.049
gene expression GO:0010467 252 0.048
hormone secretion GO:0046879 2 0.048
anterior posterior pattern specification GO:0009952 152 0.048
regulation of metabolic process GO:0019222 359 0.048
rna metabolic process GO:0016070 219 0.047
oocyte anterior posterior axis specification GO:0007314 4 0.045
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.044
modification dependent macromolecule catabolic process GO:0043632 3 0.043
embryonic organ development GO:0048568 381 0.043
nuclear transport GO:0051169 4 0.041
maintenance of location GO:0051235 4 0.041
transport GO:0006810 220 0.040
microtubule based process GO:0007017 60 0.040
negative regulation of epithelial cell proliferation GO:0050680 1 0.039
positive regulation of biological process GO:0048518 253 0.039
alternative mrna splicing via spliceosome GO:0000380 1 0.038
nuclear import GO:0051170 3 0.037
response to chemical GO:0042221 320 0.037
negative regulation of cellular process GO:0048523 283 0.036
regulation of ph GO:0006885 3 0.036
gtp catabolic process GO:0006184 2 0.036
cell part morphogenesis GO:0032990 246 0.036
nucleocytoplasmic transport GO:0006913 4 0.035
neuron development GO:0048666 262 0.035
aging GO:0007568 2 0.035
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.034
lipid storage GO:0019915 1 0.034
regulation of gene expression GO:0010468 265 0.033
positive regulation of transport GO:0051050 2 0.033
head development GO:0060322 303 0.033
single organism metabolic process GO:0044710 217 0.033
ribosome assembly GO:0042255 1 0.033
guanosine containing compound metabolic process GO:1901068 4 0.032
modification dependent protein catabolic process GO:0019941 3 0.032
spindle assembly involved in mitosis GO:0090307 1 0.032
embryonic organ morphogenesis GO:0048562 274 0.031
cilium morphogenesis GO:0060271 85 0.031
regulation of nitrogen compound metabolic process GO:0051171 251 0.031
protein targeting to nucleus GO:0044744 3 0.030
peptide transport GO:0015833 1 0.030
regulation of circadian rhythm GO:0042752 4 0.030
peptidyl lysine acetylation GO:0018394 2 0.030
exocrine pancreas development GO:0031017 28 0.030
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.030
cellular protein metabolic process GO:0044267 129 0.030
regulation of response to extracellular stimulus GO:0032104 1 0.030
phagocytosis GO:0006909 3 0.030
positive regulation of rna biosynthetic process GO:1902680 57 0.029
regulation of protein polymerization GO:0032271 2 0.029
regulation of protein catabolic process GO:0042176 1 0.029
rna 3 end processing GO:0031123 2 0.028
regulation of dna templated transcription elongation GO:0032784 3 0.028
locomotion GO:0040011 313 0.028
protein import into nucleus GO:0006606 3 0.028
nitrogen compound metabolic process GO:0006807 319 0.028
embryonic limb morphogenesis GO:0030326 2 0.028
nonmotile primary cilium assembly GO:0035058 2 0.027
proteasomal protein catabolic process GO:0010498 2 0.027
single organism organelle organization GO:1902589 199 0.027
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.027
regulation of rna metabolic process GO:0051252 224 0.026
meiotic chromosome segregation GO:0045132 3 0.026
positive regulation of catabolic process GO:0009896 4 0.026
carboxylic acid metabolic process GO:0019752 22 0.026
regulation of synapse organization GO:0050807 3 0.026
signal transduction GO:0007165 455 0.026
cell projection organization GO:0030030 284 0.026
cellular amino acid metabolic process GO:0006520 7 0.025
cell morphogenesis GO:0000902 289 0.025
embryonic cranial skeleton morphogenesis GO:0048701 90 0.025
localization of cell GO:0051674 244 0.025
nucleobase containing compound biosynthetic process GO:0034654 205 0.024
embryonic viscerocranium morphogenesis GO:0048703 52 0.024
embryonic heart tube morphogenesis GO:0003143 108 0.024
response to organic substance GO:0010033 153 0.024
neuron projection morphogenesis GO:0048812 161 0.024
skeletal system development GO:0001501 181 0.023
cilium assembly GO:0042384 58 0.023
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.023
regulation of cytoplasmic transport GO:1903649 4 0.023
dna templated transcription elongation GO:0006354 3 0.023
programmed cell death GO:0012501 119 0.023
regulation of cellular amino acid metabolic process GO:0006521 0 0.023
regulation of biosynthetic process GO:0009889 250 0.023
glucose homeostasis GO:0042593 1 0.023
regulation of cellular ketone metabolic process GO:0010565 7 0.023
protein complex disassembly GO:0043241 1 0.022
regionalization GO:0003002 274 0.022
ubiquitin dependent protein catabolic process GO:0006511 3 0.022
organic acid metabolic process GO:0006082 31 0.022
mrna processing GO:0006397 14 0.022
establishment of localization GO:0051234 244 0.022
neuron differentiation GO:0030182 353 0.022
negative regulation of kinase activity GO:0033673 4 0.022
cellular component biogenesis GO:0044085 178 0.021
microtubule cytoskeleton organization GO:0000226 33 0.021
actin filament polymerization GO:0030041 2 0.021
regulation of carbohydrate metabolic process GO:0006109 4 0.021
regulation of growth rate GO:0040009 1 0.021
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.021
ameboidal type cell migration GO:0001667 143 0.021
transcription from rna polymerase ii promoter GO:0006366 80 0.021
nucleoside monophosphate catabolic process GO:0009125 4 0.021
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.021
regulation of blood vessel size GO:0050880 2 0.021
cilium organization GO:0044782 71 0.021
positive regulation of cellular process GO:0048522 201 0.021
nuclear division GO:0000280 23 0.020
regulation of macromolecule biosynthetic process GO:0010556 225 0.020
mitotic cell cycle GO:0000278 64 0.020
developmental growth GO:0048589 166 0.020
mesenchymal cell proliferation GO:0010463 1 0.020
aromatic compound biosynthetic process GO:0019438 217 0.020
gtp metabolic process GO:0046039 4 0.020
single organism transport GO:0044765 206 0.020
positive regulation of cell cycle GO:0045787 3 0.020
amine metabolic process GO:0009308 2 0.020
actin polymerization or depolymerization GO:0008154 2 0.020
establishment of protein localization to organelle GO:0072594 4 0.020
heart looping GO:0001947 94 0.020
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.020
regulation of mitotic cell cycle GO:0007346 25 0.019
oxoacid metabolic process GO:0043436 31 0.019
positive regulation of cellular metabolic process GO:0031325 94 0.019
hormone transport GO:0009914 2 0.019
cellular ketone metabolic process GO:0042180 11 0.019
internal protein amino acid acetylation GO:0006475 2 0.019
mitotic cell cycle process GO:1903047 48 0.019
guanosine containing compound catabolic process GO:1901069 2 0.019
negative regulation of macromolecule metabolic process GO:0010605 76 0.019
positive regulation of developmental process GO:0051094 50 0.018
liver development GO:0001889 96 0.018
regulation of protein complex assembly GO:0043254 3 0.018
chemotaxis GO:0006935 104 0.018
regulation of endocrine process GO:0044060 2 0.018
heart development GO:0007507 313 0.018
primary neural tube formation GO:0014020 1 0.018
regulation of cell shape GO:0008360 1 0.018
eye morphogenesis GO:0048592 144 0.018
biosynthetic process GO:0009058 294 0.018
positive regulation of protein complex assembly GO:0031334 2 0.018
nucleobase containing compound metabolic process GO:0006139 274 0.018
regulation of response to stimulus GO:0048583 269 0.018
embryonic skeletal joint development GO:0072498 3 0.018
cellular component movement GO:0006928 335 0.018
autophagy GO:0006914 4 0.018
tube closure GO:0060606 1 0.018
regulation of stem cell proliferation GO:0072091 2 0.018
renal system process involved in regulation of systemic arterial blood pressure GO:0003071 1 0.018
macromolecule localization GO:0033036 54 0.017
regulation of cellular biosynthetic process GO:0031326 245 0.017
pancreas development GO:0031016 84 0.017
spermatid development GO:0007286 2 0.017
somatic muscle development GO:0007525 4 0.017
sensory organ morphogenesis GO:0090596 200 0.017
protein import GO:0017038 3 0.017
hindbrain development GO:0030902 91 0.017
regulation of protein complex disassembly GO:0043244 1 0.017
hepaticobiliary system development GO:0061008 98 0.017
lipid oxidation GO:0034440 1 0.017
single organism reproductive process GO:0044702 40 0.016
regulation of synapse assembly GO:0051963 3 0.016
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.016
regulation of nucleic acid templated transcription GO:1903506 213 0.016
mesenchyme development GO:0060485 127 0.016
regulation of cellular component organization GO:0051128 86 0.016
regulation of multicellular organismal process GO:0051239 277 0.016
mitotic dna integrity checkpoint GO:0044774 4 0.016
protein metabolic process GO:0019538 183 0.016
rna localization GO:0006403 4 0.016
macromolecular complex disassembly GO:0032984 1 0.016
myeloid cell homeostasis GO:0002262 56 0.016
internal peptidyl lysine acetylation GO:0018393 2 0.015
regulation of cell differentiation GO:0045595 142 0.015
epithelial cell differentiation GO:0030855 116 0.015
central nervous system development GO:0007417 387 0.015
small molecule metabolic process GO:0044281 77 0.015
embryonic skeletal system development GO:0048706 97 0.015
body morphogenesis GO:0010171 16 0.015
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 4 0.015
mrna 3 end processing GO:0031124 2 0.015
regulation of microtubule cytoskeleton organization GO:0070507 3 0.015
stem cell maintenance GO:0019827 4 0.015
regulation of mrna splicing via spliceosome GO:0048024 3 0.015
negative regulation of biological process GO:0048519 304 0.015
regulation of developmental process GO:0050793 247 0.015
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.015
regulation of establishment of planar polarity GO:0090175 4 0.015
negative regulation of cellular metabolic process GO:0031324 77 0.015
rna polyadenylation GO:0043631 2 0.015
endocrine process GO:0050886 2 0.015
regulation of carbohydrate biosynthetic process GO:0043255 1 0.015
negative regulation of cellular catabolic process GO:0031330 3 0.015
embryo development ending in birth or egg hatching GO:0009792 271 0.015
positive regulation of cellular biosynthetic process GO:0031328 68 0.015
intrahepatic bile duct development GO:0035622 11 0.015
endocrine hormone secretion GO:0060986 2 0.015
wnt signaling pathway GO:0016055 80 0.015
atp catabolic process GO:0006200 4 0.014
positive regulation of gene expression GO:0010628 71 0.014
circadian sleep wake cycle sleep GO:0050802 1 0.014
cellular response to extracellular stimulus GO:0031668 2 0.014
carbohydrate homeostasis GO:0033500 1 0.014
regulation of cellular metabolic process GO:0031323 320 0.014
regulation of mrna processing GO:0050684 3 0.014
adult behavior GO:0030534 2 0.014
negative regulation of protein phosphorylation GO:0001933 4 0.014
carbon dioxide transport GO:0015670 3 0.014
positive regulation of transcription dna templated GO:0045893 57 0.014
rna splicing GO:0008380 16 0.014
regulation of macromolecule metabolic process GO:0060255 317 0.014
regulation of tube size GO:0035150 2 0.014
embryonic skeletal system morphogenesis GO:0048704 93 0.014
response to uv GO:0009411 3 0.014
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.014
cellular response to oxygen levels GO:0071453 1 0.014
cellular amine metabolic process GO:0044106 2 0.014
axonogenesis GO:0007409 152 0.014
regulation of rna biosynthetic process GO:2001141 213 0.014
liver morphogenesis GO:0072576 8 0.014
regulation of cellular protein catabolic process GO:1903362 1 0.014
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.014
ventricular cardiac muscle tissue morphogenesis GO:0055010 2 0.014
response to stress GO:0006950 263 0.013
small gtpase mediated signal transduction GO:0007264 8 0.013
protein complex localization GO:0031503 1 0.013
development of primary female sexual characteristics GO:0046545 4 0.013
mitotic g2 dna damage checkpoint GO:0007095 3 0.013
mrna splicing via spliceosome GO:0000398 10 0.013
regulation of muscle contraction GO:0006937 3 0.013
stem cell differentiation GO:0048863 117 0.013
cell migration GO:0016477 237 0.013
regulation of purine nucleotide catabolic process GO:0033121 2 0.013
metencephalon development GO:0022037 27 0.013
positive regulation of multicellular organismal process GO:0051240 52 0.013
regulation of histone methylation GO:0031060 3 0.013
regulation of apoptotic process GO:0042981 98 0.013
histone h3 k4 methylation GO:0051568 2 0.013
cell proliferation GO:0008283 80 0.013
forebrain anterior posterior pattern specification GO:0021797 3 0.013
regulation of cellular amine metabolic process GO:0033238 0 0.013
positive regulation of nucleic acid templated transcription GO:1903508 57 0.013
regulation of reproductive process GO:2000241 4 0.013
hemopoiesis GO:0030097 183 0.013
cellular biosynthetic process GO:0044249 286 0.013
taxis GO:0042330 109 0.013
regulation of nucleocytoplasmic transport GO:0046822 2 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
macromolecule biosynthetic process GO:0009059 227 0.013
eye development GO:0001654 277 0.013
cellular protein modification process GO:0006464 100 0.013
brain development GO:0007420 293 0.013
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.013
cellular response to hypoxia GO:0071456 1 0.012
regulation of nucleoside metabolic process GO:0009118 2 0.012
lipid homeostasis GO:0055088 3 0.012
convergent extension GO:0060026 118 0.012
macromolecular complex subunit organization GO:0043933 74 0.012
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.012
microtubule cytoskeleton organization involved in mitosis GO:1902850 1 0.012
cellular localization GO:0051641 97 0.012
b cell activation GO:0042113 2 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.012
regulation of binding GO:0051098 3 0.012
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.012
circulatory system process GO:0003013 87 0.012
heterocycle biosynthetic process GO:0018130 215 0.012
stem cell development GO:0048864 82 0.012
heart process GO:0003015 71 0.012
g2 dna damage checkpoint GO:0031572 3 0.012
regulation of growth GO:0040008 42 0.012
negative regulation of biosynthetic process GO:0009890 55 0.012
cellular component disassembly GO:0022411 1 0.012
macromolecular complex assembly GO:0065003 35 0.012
regulation of hormone secretion GO:0046883 2 0.012
ventricular cardiac muscle tissue development GO:0003229 3 0.012
alpha amino acid metabolic process GO:1901605 3 0.012
organelle assembly GO:0070925 110 0.012
vasculature development GO:0001944 278 0.012
forebrain neuron fate commitment GO:0021877 1 0.012
regulation of nucleotide catabolic process GO:0030811 2 0.012
growth GO:0040007 174 0.012
startle response GO:0001964 4 0.012
keratinocyte differentiation GO:0030216 0 0.012
embryonic skeletal joint morphogenesis GO:0060272 3 0.012
negative regulation of transcription from rna polymerase ii promoter GO:0000122 16 0.012
positive regulation of rna metabolic process GO:0051254 59 0.012
gland development GO:0048732 143 0.011
one carbon compound transport GO:0019755 14 0.011
microtubule polymerization or depolymerization GO:0031109 3 0.011
smooth muscle contraction GO:0006939 2 0.011
cytokinesis GO:0000910 3 0.011
regulation of protein depolymerization GO:1901879 1 0.011
cytoskeleton dependent cytokinesis GO:0061640 3 0.011
female gonad development GO:0008585 4 0.011
chromosome organization involved in meiosis GO:0070192 1 0.011
aorta development GO:0035904 4 0.011
intracellular mrna localization GO:0008298 1 0.011
response to endogenous stimulus GO:0009719 83 0.011
blood circulation GO:0008015 87 0.011
regulation of multicellular organismal development GO:2000026 223 0.011
response to carbohydrate GO:0009743 3 0.011
organic cyclic compound biosynthetic process GO:1901362 223 0.011
positive regulation of cytoskeleton organization GO:0051495 3 0.011
lipid metabolic process GO:0006629 52 0.011
regulation of mesenchymal cell proliferation GO:0010464 1 0.011
terpenoid metabolic process GO:0006721 15 0.011
cellular protein complex disassembly GO:0043624 1 0.011
positive regulation of secretion GO:0051047 1 0.011
positive regulation of protein polymerization GO:0032273 2 0.011
positive regulation of cellular amine metabolic process GO:0033240 0 0.011
phosphatidylinositol mediated signaling GO:0048015 2 0.011
negative regulation of gene expression GO:0010629 65 0.011
gamete generation GO:0007276 33 0.011
positive regulation of nucleoside metabolic process GO:0045979 1 0.011
germ cell development GO:0007281 22 0.011
cellular component assembly involved in morphogenesis GO:0010927 107 0.011
erythrocyte homeostasis GO:0034101 55 0.011
mrna polyadenylation GO:0006378 2 0.011
mitotic dna damage checkpoint GO:0044773 4 0.011
cell differentiation in hindbrain GO:0021533 5 0.010
axon development GO:0061564 166 0.010
regulation of organ growth GO:0046620 3 0.010
cell cycle g1 s phase transition GO:0044843 1 0.010
germ line stem cell division GO:0042078 1 0.010
negative regulation of transcription dna templated GO:0045892 45 0.010
regulation of oocyte development GO:0060281 3 0.010
positive regulation of metabolic process GO:0009893 108 0.010
positive regulation of epithelial cell migration GO:0010634 2 0.010
reproduction GO:0000003 40 0.010
spindle assembly GO:0051225 2 0.010
ribonucleoside monophosphate catabolic process GO:0009158 4 0.010
macroautophagy GO:0016236 1 0.010
neuron neuron synaptic transmission GO:0007270 1 0.010
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.010
establishment of localization in cell GO:0051649 77 0.010
negative regulation of multi organism process GO:0043901 3 0.010
maternal determination of anterior posterior axis embryo GO:0008358 4 0.010
regulation of signaling GO:0023051 235 0.010
circadian sleep wake cycle GO:0042745 2 0.010
cell projection morphogenesis GO:0048858 244 0.010
regulation of cell cycle GO:0051726 52 0.010
cell cycle process GO:0022402 53 0.010
regulation of cell communication GO:0010646 232 0.010

rnpc3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of metabolism DOID:0014667 0 0.034
inherited metabolic disorder DOID:655 0 0.034
disease of anatomical entity DOID:7 0 0.022
cancer DOID:162 0 0.017
disease of cellular proliferation DOID:14566 0 0.017
organ system cancer DOID:0050686 0 0.017
cardiovascular system disease DOID:1287 0 0.012
musculoskeletal system disease DOID:17 0 0.010