Danio rerio

15 known processes

rps4x

ribosomal protein S4, X-linked

(Aliases: wu:fa91h09,zgc:92076)

rps4x biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
centrosome duplication GO:0051298 1 0.895
Fly
centrosome cycle GO:0007098 1 0.534
Fly
larval development GO:0002164 2 0.413
rrna processing GO:0006364 7 0.393
microtubule organizing center organization GO:0031023 1 0.335
Fly
ribosome assembly GO:0042255 1 0.301
cellular biosynthetic process GO:0044249 286 0.278
Human
centrosome organization GO:0051297 1 0.260
Fly
programmed cell death GO:0012501 119 0.256
nucleic acid metabolic process GO:0090304 244 0.249
cellular macromolecule metabolic process GO:0044260 391 0.214
Human
organelle organization GO:0006996 227 0.209
Fly
mitotic cell cycle GO:0000278 64 0.209
Fly
multicellular organism growth GO:0035264 4 0.201
nucleobase containing compound metabolic process GO:0006139 274 0.201
ribosome biogenesis GO:0042254 9 0.194
pole plasm assembly GO:0007315 4 0.193
aging GO:0007568 2 0.187
rna metabolic process GO:0016070 219 0.181
oocyte anterior posterior axis specification GO:0007314 4 0.181
ribosomal small subunit biogenesis GO:0042274 2 0.176
single fertilization GO:0007338 3 0.173
organic cyclic compound metabolic process GO:1901360 301 0.159
cellular aromatic compound metabolic process GO:0006725 295 0.153
single organism organelle organization GO:1902589 199 0.140
Fly
death GO:0016265 121 0.140
regulation of biosynthetic process GO:0009889 250 0.140
Human
cellular component biogenesis GO:0044085 178 0.134
maturation of ssu rrna GO:0030490 1 0.130
microtubule based process GO:0007017 60 0.126
Fly
heterocycle metabolic process GO:0046483 290 0.126
regulation of gene expression GO:0010468 265 0.125
Human
cell cycle process GO:0022402 53 0.119
Fly
nitrogen compound metabolic process GO:0006807 319 0.112
regulation of cellular biosynthetic process GO:0031326 245 0.101
Human
nuclear transport GO:0051169 4 0.094
nuclear export GO:0051168 1 0.091
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.091
gene expression GO:0010467 252 0.090
Human
cellular nitrogen compound metabolic process GO:0034641 290 0.090
cellular component assembly GO:0022607 170 0.088
sexual reproduction GO:0019953 36 0.086
cell death GO:0008219 121 0.086
regulation of macromolecule metabolic process GO:0060255 317 0.083
Human
rna localization GO:0006403 4 0.070
nuclear migration GO:0007097 3 0.070
regulation of multicellular organism growth GO:0040014 4 0.067
rrna metabolic process GO:0016072 8 0.067
homeostasis of number of cells GO:0048872 62 0.067
organelle assembly GO:0070925 110 0.067
cytoskeleton organization GO:0007010 96 0.065
Fly
regulation of macromolecule biosynthetic process GO:0010556 225 0.064
Human
translational initiation GO:0006413 3 0.058
mitotic cell cycle process GO:1903047 48 0.057
Fly
cell cycle GO:0007049 93 0.055
Fly
ncrna processing GO:0034470 8 0.052
maintenance of location GO:0051235 4 0.050
embryo development ending in birth or egg hatching GO:0009792 271 0.048
Worm
cellular macromolecule biosynthetic process GO:0034645 224 0.048
Human
nucleocytoplasmic transport GO:0006913 4 0.047
nucleic acid transport GO:0050657 2 0.044
homeostatic process GO:0042592 142 0.042
microtubule cytoskeleton organization GO:0000226 33 0.040
Fly
macromolecule biosynthetic process GO:0009059 227 0.040
Human
macromolecular complex subunit organization GO:0043933 74 0.037
Fly
pancreas development GO:0031016 84 0.037
protein complex subunit organization GO:0071822 46 0.035
Fly
regulation of establishment of protein localization GO:0070201 4 0.034
regulation of developmental process GO:0050793 247 0.032
developmental growth GO:0048589 166 0.031
protein metabolic process GO:0019538 183 0.029
Human
myeloid cell homeostasis GO:0002262 56 0.028
regulation of protein transport GO:0051223 3 0.027
female meiotic division GO:0007143 2 0.027
meiotic nuclear division GO:0007126 4 0.027
ribonucleoprotein complex biogenesis GO:0022613 13 0.027
digestive system development GO:0055123 289 0.026
cell surface receptor signaling pathway GO:0007166 325 0.026
cellular amine metabolic process GO:0044106 2 0.026
cell death in response to oxidative stress GO:0036473 2 0.026
regulation of rna metabolic process GO:0051252 224 0.025
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.025
Human
meiotic cell cycle process GO:1903046 3 0.025
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.025
rna transport GO:0050658 2 0.025
apoptotic process GO:0006915 116 0.024
cellular component morphogenesis GO:0032989 336 0.024
lipid storage GO:0019915 1 0.024
cell cycle g1 s phase transition GO:0044843 1 0.024
regulation of cytoplasmic transport GO:1903649 4 0.024
establishment of rna localization GO:0051236 3 0.024
carbohydrate homeostasis GO:0033500 1 0.023
rna biosynthetic process GO:0032774 181 0.023
myeloid cell development GO:0061515 32 0.022
erythrocyte homeostasis GO:0034101 55 0.022
gastrulation GO:0007369 208 0.021
tube morphogenesis GO:0035239 349 0.021
response to stress GO:0006950 263 0.021
muscle structure development GO:0061061 196 0.021
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.021
myofibril assembly GO:0030239 48 0.020
protein import into nucleus GO:0006606 3 0.020
regulation of metabolic process GO:0019222 359 0.020
Human
positive regulation of biological process GO:0048518 253 0.020
Human
regulation of translational initiation GO:0006446 1 0.020
regulation of cell death GO:0010941 103 0.020
regulation of growth GO:0040008 42 0.020
transcription dna templated GO:0006351 181 0.020
regulation of primary metabolic process GO:0080090 311 0.020
Human
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.020
regulation of skeletal muscle fiber development GO:0048742 2 0.020
positive regulation of striated muscle tissue development GO:0045844 1 0.019
nuclear import GO:0051170 3 0.019
negative regulation of apoptotic process GO:0043066 55 0.019
negative regulation of biological process GO:0048519 304 0.019
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.018
signal transduction GO:0007165 455 0.018
heterocycle biosynthetic process GO:0018130 215 0.018
cellular component assembly involved in morphogenesis GO:0010927 107 0.018
response to chemical GO:0042221 320 0.018
regulation of cellular amine metabolic process GO:0033238 0 0.018
rna export from nucleus GO:0006405 1 0.018
biosynthetic process GO:0009058 294 0.017
Human
fertilization GO:0009566 3 0.017
modification dependent protein catabolic process GO:0019941 3 0.017
germ cell development GO:0007281 22 0.017
adherens junction organization GO:0034332 4 0.017
establishment of protein localization to organelle GO:0072594 4 0.017
regulation of oocyte development GO:0060281 3 0.017
growth GO:0040007 174 0.017
erythrocyte differentiation GO:0030218 54 0.017
glucose homeostasis GO:0042593 1 0.017
small molecule metabolic process GO:0044281 77 0.016
cellular ketone metabolic process GO:0042180 11 0.016
immune system process GO:0002376 241 0.016
positive regulation of cellular catabolic process GO:0031331 3 0.016
maternal determination of anterior posterior axis embryo GO:0008358 4 0.016
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.016
negative regulation of dna metabolic process GO:0051053 4 0.016
positive regulation of biosynthetic process GO:0009891 68 0.016
Human
regulation of multicellular organismal process GO:0051239 277 0.015
negative regulation of macromolecule metabolic process GO:0010605 76 0.015
regulation of reproductive process GO:2000241 4 0.015
heart development GO:0007507 313 0.015
generation of neurons GO:0048699 385 0.015
regulation of purine nucleotide catabolic process GO:0033121 2 0.015
positive regulation of muscle organ development GO:0048636 1 0.015
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.015
regulation of cellular ketone metabolic process GO:0010565 7 0.015
regulation of nucleocytoplasmic transport GO:0046822 2 0.015
cell proliferation involved in heart morphogenesis GO:0061323 2 0.015
regulation of biological quality GO:0065008 263 0.015
negative regulation of metabolic process GO:0009892 86 0.014
protein localization to nucleus GO:0034504 3 0.014
negative regulation of cellular process GO:0048523 283 0.014
amine metabolic process GO:0009308 2 0.014
nucleobase containing compound biosynthetic process GO:0034654 205 0.014
alcohol biosynthetic process GO:0046165 2 0.014
mononuclear cell proliferation GO:0032943 1 0.014
positive regulation of response to stimulus GO:0048584 80 0.014
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.014
striated muscle cell differentiation GO:0051146 129 0.014
cellular response to chemical stimulus GO:0070887 157 0.014
hematopoietic or lymphoid organ development GO:0048534 191 0.014
macromolecular complex assembly GO:0065003 35 0.014
establishment of protein localization to plasma membrane GO:0090002 1 0.014
regulation of cellular response to oxidative stress GO:1900407 2 0.014
positive regulation of muscle tissue development GO:1901863 1 0.013
intracellular signal transduction GO:0035556 85 0.013
neuron development GO:0048666 262 0.013
aromatic compound biosynthetic process GO:0019438 217 0.013
adult behavior GO:0030534 2 0.013
organic cyclic compound biosynthetic process GO:1901362 223 0.013
regulation of protein targeting GO:1903533 2 0.013
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.013
ubiquitin dependent protein catabolic process GO:0006511 3 0.013
organic substance biosynthetic process GO:1901576 289 0.013
Human
regulation of apoptotic process GO:0042981 98 0.013
regulation of cellular metabolic process GO:0031323 320 0.013
Human
gtp catabolic process GO:0006184 2 0.013
i kappab kinase nf kappab signaling GO:0007249 4 0.013
digestive tract morphogenesis GO:0048546 231 0.013
positive regulation of cellular process GO:0048522 201 0.012
Human
single organism metabolic process GO:0044710 217 0.012
regulation of translation GO:0006417 3 0.012
Human
carbohydrate derivative metabolic process GO:1901135 61 0.012
regulation of cell maturation GO:1903429 1 0.012
negative regulation of cell death GO:0060548 60 0.012
regulation of skeletal muscle tissue development GO:0048641 4 0.012
protein targeting to nucleus GO:0044744 3 0.012
anterior posterior pattern specification GO:0009952 152 0.012
g1 s transition of mitotic cell cycle GO:0000082 1 0.012
cytoplasm organization GO:0007028 4 0.012
protein complex disassembly GO:0043241 1 0.012
nucleobase containing compound transport GO:0015931 2 0.012
regulation of nucleic acid templated transcription GO:1903506 213 0.012
positive regulation of gene expression GO:0010628 71 0.012
Human
nucleoside monophosphate catabolic process GO:0009125 4 0.012
erythrocyte development GO:0048821 24 0.012
proteasomal protein catabolic process GO:0010498 2 0.012
cell substrate junction assembly GO:0007044 2 0.012
atp catabolic process GO:0006200 4 0.012
single organism localization GO:1902578 225 0.012
positive regulation of metabolic process GO:0009893 108 0.012
Human
regulation of gtp catabolic process GO:0033124 2 0.012
positive regulation of developmental process GO:0051094 50 0.012
regulation of gtpase activity GO:0043087 2 0.012
intracellular mrna localization GO:0008298 1 0.012
cell part morphogenesis GO:0032990 246 0.011
positive regulation of macromolecule biosynthetic process GO:0010557 59 0.011
Human
response to hydrogen peroxide GO:0042542 3 0.011
segmentation GO:0035282 97 0.011
regulation of nucleoside metabolic process GO:0009118 2 0.011
positive regulation of gtpase activity GO:0043547 1 0.011
regulation of binding GO:0051098 3 0.011
vasculature development GO:0001944 278 0.011
guanosine containing compound metabolic process GO:1901068 4 0.011
negative regulation of gene expression GO:0010629 65 0.011
negative regulation of muscle cell differentiation GO:0051148 1 0.011
negative regulation of protein kinase activity GO:0006469 4 0.011
negative regulation of protein transport GO:0051224 3 0.011
ribonucleoprotein complex assembly GO:0022618 5 0.011
regulation of nitrogen compound metabolic process GO:0051171 251 0.011
lymphocyte homeostasis GO:0002260 1 0.011
negative regulation of cell cycle GO:0045786 14 0.011
sensory organ development GO:0007423 393 0.011
modification dependent macromolecule catabolic process GO:0043632 3 0.011
nucleic acid templated transcription GO:0097659 181 0.011
negative regulation of kinase activity GO:0033673 4 0.011
reproduction GO:0000003 40 0.011
protein targeting to membrane GO:0006612 1 0.011
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.011
negative regulation of nucleic acid templated transcription GO:1903507 45 0.011
cellular carbohydrate metabolic process GO:0044262 4 0.011
guanosine containing compound catabolic process GO:1901069 2 0.011
gamete generation GO:0007276 33 0.011
cell projection morphogenesis GO:0048858 244 0.011
embryonic skeletal system development GO:0048706 97 0.010
regulation of signal transduction GO:0009966 225 0.010
regulation of nucleotide catabolic process GO:0030811 2 0.010
localization of cell GO:0051674 244 0.010
positive regulation of apoptotic signaling pathway GO:2001235 1 0.010
protein homooligomerization GO:0051260 3 0.010
positive regulation of embryonic development GO:0040019 3 0.010
sister chromatid cohesion GO:0007062 2 0.010
multicellular organismal reproductive process GO:0048609 35 0.010
oxoacid metabolic process GO:0043436 31 0.010
striated muscle cell development GO:0055002 108 0.010

rps4x disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
immune system disease DOID:2914 0 0.621
disease of anatomical entity DOID:7 0 0.621
bone marrow disease DOID:4961 0 0.621
hematopoietic system disease DOID:74 0 0.621
anemia DOID:2355 0 0.395
congenital hypoplastic anemia DOID:1342 0 0.138
diamond blackfan anemia DOID:1339 0 0.138
aplastic anemia DOID:12449 0 0.138