Danio rerio

0 known processes

srm

spermidine synthase

(Aliases: id:ibd1177,wu:fa18b03,MGC63600,zgc:63600)

srm biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.552
single organism transport GO:0044765 206 0.230
cellular component assembly GO:0022607 170 0.171
small molecule metabolic process GO:0044281 77 0.157
guanosine containing compound catabolic process GO:1901069 2 0.132
multicellular organism growth GO:0035264 4 0.130
organonitrogen compound metabolic process GO:1901564 74 0.124
Human
single organism localization GO:1902578 225 0.122
nucleobase containing compound metabolic process GO:0006139 274 0.117
phagocytosis GO:0006909 3 0.115
regulation of multicellular organism growth GO:0040014 4 0.106
transport GO:0006810 220 0.095
growth GO:0040007 174 0.094
hemopoiesis GO:0030097 183 0.093
cellular nitrogen compound metabolic process GO:0034641 290 0.092
Human
heterocycle metabolic process GO:0046483 290 0.091
dna catabolic process GO:0006308 1 0.089
nitrogen compound metabolic process GO:0006807 319 0.085
Human
cellular component biogenesis GO:0044085 178 0.085
programmed cell death GO:0012501 119 0.083
gtp metabolic process GO:0046039 4 0.081
guanosine containing compound metabolic process GO:1901068 4 0.080
gtp catabolic process GO:0006184 2 0.079
regulation of developmental process GO:0050793 247 0.077
alternative mrna splicing via spliceosome GO:0000380 1 0.076
response to drug GO:0042493 3 0.073
apoptotic process GO:0006915 116 0.073
establishment of protein localization to organelle GO:0072594 4 0.072
cellular macromolecule metabolic process GO:0044260 391 0.070
organic cyclic compound metabolic process GO:1901360 301 0.070
protein secretion GO:0009306 1 0.069
establishment of localization GO:0051234 244 0.069
aging GO:0007568 2 0.067
negative regulation of cellular process GO:0048523 283 0.067
death GO:0016265 121 0.066
germ line stem cell maintenance GO:0030718 2 0.064
positive regulation of cellular component biogenesis GO:0044089 3 0.061
neuron development GO:0048666 262 0.059
cell death GO:0008219 121 0.058
immune system process GO:0002376 241 0.058
stem cell differentiation GO:0048863 117 0.058
regulation of macromolecule metabolic process GO:0060255 317 0.057
mitochondrion organization GO:0007005 4 0.056
hematopoietic or lymphoid organ development GO:0048534 191 0.056
carbohydrate derivative biosynthetic process GO:1901137 43 0.056
gene expression GO:0010467 252 0.055
autophagy GO:0006914 4 0.054
positive regulation of dna metabolic process GO:0051054 1 0.054
ubiquitin dependent protein catabolic process GO:0006511 3 0.052
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.052
cellular response to external stimulus GO:0071496 2 0.052
response to external stimulus GO:0009605 264 0.051
embryonic organ development GO:0048568 381 0.051
localization within membrane GO:0051668 1 0.050
regulation of biological quality GO:0065008 263 0.049
positive regulation of histone modification GO:0031058 1 0.048
signal transduction GO:0007165 455 0.048
rna metabolic process GO:0016070 219 0.046
establishment of localization in cell GO:0051649 77 0.046
cellular localization GO:0051641 97 0.046
regulation of mrna processing GO:0050684 3 0.046
regulation of stem cell differentiation GO:2000736 4 0.045
single organism metabolic process GO:0044710 217 0.045
cellular response to extracellular stimulus GO:0031668 2 0.042
morphogenesis of an epithelium GO:0002009 333 0.042
regulation of metabolic process GO:0019222 359 0.041
regulation of gene expression GO:0010468 265 0.040
regulation of cellular metabolic process GO:0031323 320 0.040
regulation of multicellular organismal process GO:0051239 277 0.038
response to other organism GO:0051707 97 0.038
embryo development ending in birth or egg hatching GO:0009792 271 0.037
rna modification GO:0009451 2 0.037
golgi vesicle transport GO:0048193 3 0.036
regulation of establishment of protein localization GO:0070201 4 0.036
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.035
positive regulation of transport GO:0051050 2 0.034
positive regulation of nervous system development GO:0051962 25 0.033
cell projection organization GO:0030030 284 0.033
immune system development GO:0002520 191 0.033
somite development GO:0061053 96 0.032
protein import GO:0017038 3 0.032
positive regulation of developmental process GO:0051094 50 0.032
regulation of response to stimulus GO:0048583 269 0.032
positive regulation of biological process GO:0048518 253 0.031
nucleobase containing small molecule metabolic process GO:0055086 32 0.031
biosynthetic process GO:0009058 294 0.031
Human
organophosphate metabolic process GO:0019637 37 0.030
organic substance catabolic process GO:1901575 28 0.029
multi organism cellular process GO:0044764 2 0.029
response to chemical GO:0042221 320 0.028
embryonic organ morphogenesis GO:0048562 274 0.028
purine nucleotide metabolic process GO:0006163 27 0.028
regulation of reproductive process GO:2000241 4 0.028
single organism intracellular transport GO:1902582 25 0.027
nucleic acid metabolic process GO:0090304 244 0.027
pigmentation GO:0043473 85 0.027
organic substance biosynthetic process GO:1901576 289 0.027
Human
regulation of mrna splicing via spliceosome GO:0048024 3 0.026
neuron differentiation GO:0030182 353 0.026
protein k63 linked ubiquitination GO:0070534 2 0.026
phosphate containing compound metabolic process GO:0006796 108 0.026
cellular amine metabolic process GO:0044106 2 0.026
Human
response to carbohydrate GO:0009743 3 0.026
regulation of cellular ketone metabolic process GO:0010565 7 0.026
nuclear import GO:0051170 3 0.026
organic cyclic compound catabolic process GO:1901361 15 0.025
cellular component movement GO:0006928 335 0.025
organic acid metabolic process GO:0006082 31 0.025
translational initiation GO:0006413 3 0.025
positive regulation of cell cycle GO:0045787 3 0.025
regulation of translational initiation GO:0006446 1 0.025
cilium organization GO:0044782 71 0.025
regulation of primary metabolic process GO:0080090 311 0.025
phagocytosis engulfment GO:0006911 1 0.024
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.024
central nervous system development GO:0007417 387 0.024
brain development GO:0007420 293 0.024
meiotic cell cycle process GO:1903046 3 0.024
embryonic heart tube morphogenesis GO:0003143 108 0.024
determination of left right symmetry GO:0007368 179 0.024
carbohydrate homeostasis GO:0033500 1 0.024
regulation of cell death GO:0010941 103 0.024
epithelial tube morphogenesis GO:0060562 148 0.024
response to stress GO:0006950 263 0.023
regulation of nitrogen compound metabolic process GO:0051171 251 0.023
locomotion GO:0040011 313 0.023
nucleobase containing compound catabolic process GO:0034655 15 0.023
specification of symmetry GO:0009799 204 0.023
cellular aromatic compound metabolic process GO:0006725 295 0.023
cellular response to starvation GO:0009267 1 0.023
stem cell proliferation GO:0072089 4 0.023
cell motility GO:0048870 244 0.023
positive regulation of chromatin modification GO:1903310 1 0.023
protein metabolic process GO:0019538 183 0.022
dorsal ventral pattern formation GO:0009953 125 0.022
cellular response to nutrient levels GO:0031669 2 0.022
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.022
purine ribonucleotide metabolic process GO:0009150 27 0.022
melanosome transport GO:0032402 19 0.022
taxis GO:0042330 109 0.022
interspecies interaction between organisms GO:0044419 4 0.021
carbohydrate derivative metabolic process GO:1901135 61 0.021
regulation of cell shape GO:0008360 1 0.021
multi organism process GO:0051704 134 0.021
negative regulation of cytoplasmic transport GO:1903650 2 0.021
tube morphogenesis GO:0035239 349 0.021
regulation of biosynthetic process GO:0009889 250 0.021
nucleotide metabolic process GO:0009117 28 0.021
intracellular transport GO:0046907 32 0.021
photoreceptor cell morphogenesis GO:0008594 1 0.021
organelle assembly GO:0070925 110 0.021
cellular protein catabolic process GO:0044257 4 0.021
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.020
head development GO:0060322 303 0.020
spermatid development GO:0007286 2 0.020
negative regulation of biological process GO:0048519 304 0.020
cellular component morphogenesis GO:0032989 336 0.020
digestive system development GO:0055123 289 0.020
regulation of gtp catabolic process GO:0033124 2 0.020
amine metabolic process GO:0009308 2 0.020
Human
homeostatic process GO:0042592 142 0.020
regulation of cellular amine metabolic process GO:0033238 0 0.020
photoreceptor cell development GO:0042461 40 0.020
generation of neurons GO:0048699 385 0.020
stem cell maintenance GO:0019827 4 0.019
ribonucleoside biosynthetic process GO:0042455 2 0.019
hormone transport GO:0009914 2 0.019
cellular protein metabolic process GO:0044267 129 0.019
single organism cell adhesion GO:0098602 29 0.019
negative regulation of catabolic process GO:0009895 3 0.019
response to external biotic stimulus GO:0043207 97 0.019
viral process GO:0016032 1 0.019
regulation of cytoplasmic transport GO:1903649 4 0.019
protein import into nucleus GO:0006606 3 0.019
carboxylic acid metabolic process GO:0019752 22 0.019
cellular response to organic substance GO:0071310 105 0.018
spermatid differentiation GO:0048515 2 0.018
exocytosis GO:0006887 1 0.018
cell part morphogenesis GO:0032990 246 0.018
negative regulation of autophagy GO:0010507 1 0.018
maintenance of location GO:0051235 4 0.018
nucleic acid templated transcription GO:0097659 181 0.018
positive regulation of secretion GO:0051047 1 0.018
single organism organelle organization GO:1902589 199 0.018
regulation of programmed cell death GO:0043067 101 0.018
positive regulation of gene expression GO:0010628 71 0.018
regulation of protein complex assembly GO:0043254 3 0.018
convergent extension GO:0060026 118 0.018
positive regulation of cellular catabolic process GO:0031331 3 0.018
negative regulation of cellular catabolic process GO:0031330 3 0.018
nuclear transport GO:0051169 4 0.018
cellular amino acid metabolic process GO:0006520 7 0.018
regulation of hormone secretion GO:0046883 2 0.018
single organism nuclear import GO:1902593 3 0.018
vasculature development GO:0001944 278 0.018
regulation of purine nucleotide catabolic process GO:0033121 2 0.017
regulation of cellular amino acid metabolic process GO:0006521 0 0.017
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.017
double strand break repair GO:0006302 3 0.017
positive regulation of cell adhesion GO:0045785 1 0.017
angiogenesis GO:0001525 158 0.017
determination of heart left right asymmetry GO:0061371 117 0.017
modification dependent macromolecule catabolic process GO:0043632 3 0.017
cellular nitrogen compound catabolic process GO:0044270 15 0.017
neurotransmitter transport GO:0006836 2 0.017
somitogenesis GO:0001756 87 0.017
synaptic growth at neuromuscular junction GO:0051124 2 0.017
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.017
digestive tract development GO:0048565 265 0.016
embryonic limb morphogenesis GO:0030326 2 0.016
peptide transport GO:0015833 1 0.016
cell migration GO:0016477 237 0.016
positive regulation of cellular amine metabolic process GO:0033240 0 0.016
cellular ketone metabolic process GO:0042180 11 0.016
small gtpase mediated signal transduction GO:0007264 8 0.016
aromatic compound catabolic process GO:0019439 15 0.016
centrosome organization GO:0051297 1 0.016
heart development GO:0007507 313 0.016
golgi organization GO:0007030 1 0.016
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.015
hormone secretion GO:0046879 2 0.015
photoreceptor cell differentiation GO:0046530 55 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.015
purine ribonucleoside metabolic process GO:0046128 10 0.015
cytokinesis GO:0000910 3 0.015
catabolic process GO:0009056 32 0.015
protein targeting to nucleus GO:0044744 3 0.015
developmental growth GO:0048589 166 0.015
regulation of protein catabolic process GO:0042176 1 0.015
forebrain cell migration GO:0021885 1 0.015
ras protein signal transduction GO:0007265 7 0.015
negative regulation of catalytic activity GO:0043086 21 0.015
recombinational repair GO:0000725 1 0.015
atp catabolic process GO:0006200 4 0.015
female sex differentiation GO:0046660 4 0.015
cellular component assembly involved in morphogenesis GO:0010927 107 0.015
post golgi vesicle mediated transport GO:0006892 1 0.015
localization of cell GO:0051674 244 0.015
chemical homeostasis GO:0048878 49 0.015
cilium morphogenesis GO:0060271 85 0.015
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.014
regulation of cytokine production GO:0001817 3 0.014
actin filament polymerization GO:0030041 2 0.014
segmentation GO:0035282 97 0.014
somatic muscle development GO:0007525 4 0.014
positive regulation of synapse assembly GO:0051965 1 0.014
modification dependent protein catabolic process GO:0019941 3 0.014
positive regulation of stress activated protein kinase signaling cascade GO:0070304 3 0.014
embryonic heart tube development GO:0035050 133 0.014
membrane invagination GO:0010324 1 0.014
regulation of protein transport GO:0051223 3 0.014
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.014
proteasomal protein catabolic process GO:0010498 2 0.014
organic substance transport GO:0071702 58 0.013
macromolecule biosynthetic process GO:0009059 227 0.013
response to monosaccharide GO:0034284 3 0.013
regulation of apoptotic process GO:0042981 98 0.013
i kappab kinase nf kappab signaling GO:0007249 4 0.013
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.013
negative regulation of multicellular organismal process GO:0051241 69 0.013
regulation of protein targeting GO:1903533 2 0.013
cellular macromolecule biosynthetic process GO:0034645 224 0.013
oxoacid metabolic process GO:0043436 31 0.013
macromolecular complex assembly GO:0065003 35 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.013
response to bacterium GO:0009617 58 0.013
regulation of neurogenesis GO:0050767 87 0.013
regulation of protein polymerization GO:0032271 2 0.013
positive regulation of cytoskeleton organization GO:0051495 3 0.013
regionalization GO:0003002 274 0.013
regulation of developmental growth GO:0048638 38 0.013
blood vessel development GO:0001568 246 0.013
cilium assembly GO:0042384 58 0.013
heart looping GO:0001947 94 0.013
positive regulation of stress activated mapk cascade GO:0032874 3 0.013
ion transport GO:0006811 114 0.013
response to glucose GO:0009749 3 0.013
positive regulation of jnk cascade GO:0046330 3 0.012
nucleoside phosphate metabolic process GO:0006753 28 0.012
heterocycle catabolic process GO:0046700 15 0.012
defense response to other organism GO:0098542 33 0.012
cell projection morphogenesis GO:0048858 244 0.012
positive regulation of catabolic process GO:0009896 4 0.012
regulation of cellular biosynthetic process GO:0031326 245 0.012
chordate embryonic development GO:0043009 271 0.012
macroautophagy GO:0016236 1 0.012
response to uv GO:0009411 3 0.012
regulation of cell development GO:0060284 100 0.012
regulation of synaptic plasticity GO:0048167 1 0.012
regulation of macromolecule biosynthetic process GO:0010556 225 0.012
posttranscriptional regulation of gene expression GO:0010608 14 0.012
protein polymerization GO:0051258 4 0.012
regulation of synapse organization GO:0050807 3 0.012
adult behavior GO:0030534 2 0.012
organelle organization GO:0006996 227 0.012
macromolecule localization GO:0033036 54 0.012
regulation of multicellular organismal development GO:2000026 223 0.012
nucleoside biosynthetic process GO:0009163 2 0.012
meiotic chromosome segregation GO:0045132 3 0.011
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.011
protein localization to cell surface GO:0034394 3 0.011
cellular response to organic cyclic compound GO:0071407 38 0.011
response to oxygen containing compound GO:1901700 55 0.011
cell projection assembly GO:0030031 64 0.011
cell surface receptor signaling pathway GO:0007166 325 0.011
development of primary female sexual characteristics GO:0046545 4 0.011
intracellular signal transduction GO:0035556 85 0.011
fertilization GO:0009566 3 0.011
establishment of protein localization to plasma membrane GO:0090002 1 0.011
lipid storage GO:0019915 1 0.011
actin polymerization or depolymerization GO:0008154 2 0.011
extrinsic apoptotic signaling pathway via death domain receptors GO:0008625 1 0.011
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.011
regulation of metal ion transport GO:0010959 4 0.011
determination of bilateral symmetry GO:0009855 204 0.011
positive regulation of protein complex assembly GO:0031334 2 0.011
negative regulation of mrna metabolic process GO:1903312 3 0.011
regulation of gtpase activity GO:0043087 2 0.011
female gonad development GO:0008585 4 0.011
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.011
anterior posterior pattern specification GO:0009952 152 0.011
tube closure GO:0060606 1 0.011
response to hexose GO:0009746 3 0.011
regulation of synapse assembly GO:0051963 3 0.011
b cell activation GO:0042113 2 0.010
regulation of nucleotide catabolic process GO:0030811 2 0.010
negative regulation of apoptotic process GO:0043066 55 0.010
regulation of neuron differentiation GO:0045664 56 0.010
gastrulation with mouth forming second GO:0001702 44 0.010
skeletal system morphogenesis GO:0048705 102 0.010
skeletal system development GO:0001501 181 0.010
protein localization to plasma membrane GO:0072659 1 0.010
regulation of cell communication GO:0010646 232 0.010
urogenital system development GO:0001655 97 0.010
liver development GO:0001889 96 0.010
response to biotic stimulus GO:0009607 97 0.010
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.010
neurotransmitter secretion GO:0007269 2 0.010
axon ensheathment in central nervous system GO:0032291 2 0.010
negative regulation of intracellular transport GO:0032387 3 0.010
pigment granule localization GO:0051875 25 0.010
regulation of intracellular protein transport GO:0033157 3 0.010

srm disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.054
nervous system disease DOID:863 0 0.036
disease of metabolism DOID:0014667 0 0.014
diabetes mellitus DOID:9351 0 0.012
type 2 diabetes mellitus DOID:9352 0 0.012
carbohydrate metabolism disease DOID:0050013 0 0.012
glucose metabolism disease DOID:4194 0 0.012
acquired metabolic disease DOID:0060158 0 0.012
sensory system disease DOID:0050155 0 0.012
heart disease DOID:114 0 0.011
cardiomyopathy DOID:0050700 0 0.011
muscle tissue disease DOID:66 0 0.011
muscular disease DOID:0080000 0 0.011
musculoskeletal system disease DOID:17 0 0.011
myopathy DOID:423 0 0.011
cardiovascular system disease DOID:1287 0 0.011