Danio rerio

0 known processes

srrm2

serine/arginine repetitive matrix 2

(Aliases: MGC110023,zgc:110023)

srrm2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
establishment of localization GO:0051234 244 0.222
nucleocytoplasmic transport GO:0006913 4 0.209
transport GO:0006810 220 0.161
establishment of protein localization to organelle GO:0072594 4 0.142
aging GO:0007568 2 0.105
protein localization to nucleus GO:0034504 3 0.100
embryo development ending in birth or egg hatching GO:0009792 271 0.092
protein import into nucleus GO:0006606 3 0.090
regulation of response to stimulus GO:0048583 269 0.089
nuclear import GO:0051170 3 0.089
single organism localization GO:1902578 225 0.088
protein import GO:0017038 3 0.087
protein targeting to nucleus GO:0044744 3 0.086
nuclear transport GO:0051169 4 0.078
positive regulation of transport GO:0051050 2 0.078
single organism nuclear import GO:1902593 3 0.078
regulation of metabolic process GO:0019222 359 0.073
cellular macromolecule metabolic process GO:0044260 391 0.071
positive regulation of cell cycle GO:0045787 3 0.071
regulation of protein localization to nucleus GO:1900180 2 0.068
embryonic organ development GO:0048568 381 0.067
gene expression GO:0010467 252 0.063
multicellular organism growth GO:0035264 4 0.057
organic cyclic compound biosynthetic process GO:1901362 223 0.054
phagocytosis GO:0006909 3 0.051
regulation of cytoplasmic transport GO:1903649 4 0.050
internal protein amino acid acetylation GO:0006475 2 0.049
cellular response to extracellular stimulus GO:0031668 2 0.049
digestive tract development GO:0048565 265 0.048
cellular protein catabolic process GO:0044257 4 0.048
locomotion GO:0040011 313 0.047
positive regulation of cellular component biogenesis GO:0044089 3 0.046
digestive system development GO:0055123 289 0.045
multi organism process GO:0051704 134 0.045
mitotic cell cycle process GO:1903047 48 0.044
regulation of establishment of protein localization GO:0070201 4 0.044
mesenchymal cell differentiation GO:0048762 87 0.044
embryonic skeletal system morphogenesis GO:0048704 93 0.043
regulation of erk1 and erk2 cascade GO:0070372 4 0.043
signal transduction GO:0007165 455 0.043
cellular biosynthetic process GO:0044249 286 0.043
larval development GO:0002164 2 0.042
oocyte anterior posterior axis specification GO:0007314 4 0.042
regulation of multicellular organism growth GO:0040014 4 0.042
regulation of cell communication GO:0010646 232 0.041
regulation of protein import into nucleus GO:0042306 2 0.041
organic substance transport GO:0071702 58 0.041
erythrocyte differentiation GO:0030218 54 0.041
regulation of autophagy GO:0010506 3 0.041
stem cell proliferation GO:0072089 4 0.041
single organism transport GO:0044765 206 0.040
regulation of cell cycle GO:0051726 52 0.040
mesenchyme development GO:0060485 127 0.040
regulation of intracellular protein transport GO:0033157 3 0.040
regulation of protein targeting GO:1903533 2 0.039
cytokinesis GO:0000910 3 0.039
cell cycle g1 s phase transition GO:0044843 1 0.038
rna localization GO:0006403 4 0.038
mesenchymal cell development GO:0014031 78 0.038
chemosensory behavior GO:0007635 1 0.037
protein acylation GO:0043543 3 0.036
maintenance of location GO:0051235 4 0.035
sexual reproduction GO:0019953 36 0.035
nitrogen compound metabolic process GO:0006807 319 0.035
regulation of protein transport GO:0051223 3 0.035
erk1 and erk2 cascade GO:0070371 4 0.035
tube morphogenesis GO:0035239 349 0.035
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.035
regulation of biological quality GO:0065008 263 0.034
regulation of meiotic cell cycle GO:0051445 1 0.034
regulation of signaling GO:0023051 235 0.034
synaptic growth at neuromuscular junction GO:0051124 2 0.034
cellular nitrogen compound biosynthetic process GO:0044271 218 0.033
spindle assembly GO:0051225 2 0.033
nucleic acid transport GO:0050657 2 0.033
negative regulation of dna replication GO:0008156 2 0.033
regulation of mrna splicing via spliceosome GO:0048024 3 0.033
embryonic organ morphogenesis GO:0048562 274 0.032
negative regulation of cytoplasmic transport GO:1903650 2 0.031
cell migration GO:0016477 237 0.031
regulation of stem cell proliferation GO:0072091 2 0.031
oocyte differentiation GO:0009994 14 0.031
nucleobase containing compound transport GO:0015931 2 0.030
meiotic nuclear division GO:0007126 4 0.030
homeostasis of number of cells GO:0048872 62 0.030
regulation of signal transduction GO:0009966 225 0.030
erythrocyte homeostasis GO:0034101 55 0.030
regulation of multicellular organismal process GO:0051239 277 0.030
phosphorus metabolic process GO:0006793 109 0.029
cellular component assembly GO:0022607 170 0.029
regulation of protein catabolic process GO:0042176 1 0.029
modification dependent protein catabolic process GO:0019941 3 0.029
regulation of protein complex assembly GO:0043254 3 0.028
heterocycle biosynthetic process GO:0018130 215 0.028
cellular component movement GO:0006928 335 0.028
cell surface receptor signaling pathway GO:0007166 325 0.028
positive regulation of biological process GO:0048518 253 0.027
neural crest cell differentiation GO:0014033 72 0.027
nucleobase containing compound metabolic process GO:0006139 274 0.027
cognition GO:0050890 1 0.027
regulation of macromolecule metabolic process GO:0060255 317 0.026
embryonic cranial skeleton morphogenesis GO:0048701 90 0.026
embryonic skeletal system development GO:0048706 97 0.026
positive regulation of cellular process GO:0048522 201 0.026
organic cyclic compound metabolic process GO:1901360 301 0.026
cellular localization GO:0051641 97 0.026
regulation of dna replication GO:0006275 3 0.026
sensory organ development GO:0007423 393 0.026
cellular nitrogen compound metabolic process GO:0034641 290 0.025
cellular response to external stimulus GO:0071496 2 0.025
modification dependent macromolecule catabolic process GO:0043632 3 0.025
negative regulation of dna metabolic process GO:0051053 4 0.025
amine metabolic process GO:0009308 2 0.025
developmental growth GO:0048589 166 0.025
positive regulation of notch signaling pathway GO:0045747 3 0.025
localization of cell GO:0051674 244 0.025
regulation of nitrogen compound metabolic process GO:0051171 251 0.025
regulation of response to nutrient levels GO:0032107 1 0.025
gastrulation GO:0007369 208 0.024
immune system development GO:0002520 191 0.024
ubiquitin dependent protein catabolic process GO:0006511 3 0.024
internal peptidyl lysine acetylation GO:0018393 2 0.024
anterior posterior pattern specification GO:0009952 152 0.024
adult behavior GO:0030534 2 0.024
microtubule based process GO:0007017 60 0.023
g1 s transition of mitotic cell cycle GO:0000082 1 0.023
hemopoiesis GO:0030097 183 0.023
blood vessel morphogenesis GO:0048514 216 0.023
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.023
cellular amine metabolic process GO:0044106 2 0.023
stem cell division GO:0017145 1 0.023
myeloid cell differentiation GO:0030099 86 0.023
carboxylic acid metabolic process GO:0019752 22 0.023
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.023
histone h3 k4 methylation GO:0051568 2 0.023
regulation of chromosome segregation GO:0051983 1 0.022
macromolecule localization GO:0033036 54 0.022
peptidyl lysine methylation GO:0018022 3 0.022
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.022
purine nucleoside monophosphate catabolic process GO:0009128 4 0.022
single organism organelle organization GO:1902589 199 0.022
cellular aromatic compound metabolic process GO:0006725 295 0.022
homeostatic process GO:0042592 142 0.022
epithelial cell differentiation GO:0030855 116 0.022
extrinsic apoptotic signaling pathway GO:0097191 3 0.022
negative regulation of nuclear division GO:0051784 3 0.022
response to abiotic stimulus GO:0009628 122 0.022
compound eye development GO:0048749 2 0.021
chordate embryonic development GO:0043009 271 0.021
multicellular organismal reproductive process GO:0048609 35 0.021
mitotic cell cycle GO:0000278 64 0.021
skeletal system development GO:0001501 181 0.021
alternative mrna splicing via spliceosome GO:0000380 1 0.021
regulation of cellular amine metabolic process GO:0033238 0 0.021
atp catabolic process GO:0006200 4 0.021
oxoacid metabolic process GO:0043436 31 0.021
immune system process GO:0002376 241 0.021
protein acetylation GO:0006473 2 0.021
response to endogenous stimulus GO:0009719 83 0.020
regulation of organelle assembly GO:1902115 4 0.020
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.020
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.020
somatic muscle development GO:0007525 4 0.020
negative regulation of biological process GO:0048519 304 0.019
rna metabolic process GO:0016070 219 0.019
cell division GO:0051301 20 0.019
myeloid cell homeostasis GO:0002262 56 0.019
regulation of mrna processing GO:0050684 3 0.019
aromatic compound biosynthetic process GO:0019438 217 0.019
stem cell maintenance GO:0019827 4 0.019
regulation of cell activation GO:0050865 1 0.019
regulation of synapse assembly GO:0051963 3 0.019
rna transport GO:0050658 2 0.019
ovulation cycle process GO:0022602 2 0.019
negative regulation of synapse assembly GO:0051964 2 0.019
nuclear export GO:0051168 1 0.019
organic substance biosynthetic process GO:1901576 289 0.019
primary neural tube formation GO:0014020 1 0.019
multicellular organismal metabolic process GO:0044236 2 0.019
response to hydrogen peroxide GO:0042542 3 0.019
response to nutrient GO:0007584 3 0.019
b cell activation GO:0042113 2 0.018
regulation of primary metabolic process GO:0080090 311 0.018
cellular response to starvation GO:0009267 1 0.018
cell motility GO:0048870 244 0.018
intracellular signal transduction GO:0035556 85 0.018
regulation of gene expression GO:0010468 265 0.018
response to organic substance GO:0010033 153 0.018
positive regulation of catabolic process GO:0009896 4 0.018
nucleic acid metabolic process GO:0090304 244 0.018
regulation of cell development GO:0060284 100 0.018
rna biosynthetic process GO:0032774 181 0.018
regulation of synapse organization GO:0050807 3 0.018
cellular component morphogenesis GO:0032989 336 0.018
cell morphogenesis GO:0000902 289 0.018
regulation of skeletal muscle tissue development GO:0048641 4 0.018
programmed cell death GO:0012501 119 0.018
heterocycle metabolic process GO:0046483 290 0.018
ras protein signal transduction GO:0007265 7 0.017
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.017
proteasomal protein catabolic process GO:0010498 2 0.017
cellular response to nutrient levels GO:0031669 2 0.017
rna export from nucleus GO:0006405 1 0.017
heart development GO:0007507 313 0.017
organonitrogen compound metabolic process GO:1901564 74 0.017
regulation of cellular protein catabolic process GO:1903362 1 0.017
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.017
ovarian follicle development GO:0001541 2 0.017
dna templated transcription elongation GO:0006354 3 0.017
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.017
stem cell development GO:0048864 82 0.017
macromolecule modification GO:0043412 111 0.017
angiogenesis GO:0001525 158 0.017
regulation of cellular ketone metabolic process GO:0010565 7 0.017
cellular amino acid metabolic process GO:0006520 7 0.017
transcription dna templated GO:0006351 181 0.017
maternal determination of anterior posterior axis embryo GO:0008358 4 0.017
epithelial tube morphogenesis GO:0060562 148 0.016
stem cell differentiation GO:0048863 117 0.016
regulation of nucleocytoplasmic transport GO:0046822 2 0.016
cell death GO:0008219 121 0.016
lipid storage GO:0019915 1 0.016
negative regulation of mitosis GO:0045839 3 0.016
regulation of dna templated transcription elongation GO:0032784 3 0.016
meiosis i GO:0007127 1 0.016
hematopoietic or lymphoid organ development GO:0048534 191 0.016
single organism metabolic process GO:0044710 217 0.016
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.016
ovulation cycle GO:0042698 2 0.016
sequestering of metal ion GO:0051238 3 0.016
regulation of cellular amino acid metabolic process GO:0006521 0 0.016
regulation of cell proliferation GO:0042127 37 0.016
blood vessel development GO:0001568 246 0.016
neuroblast proliferation GO:0007405 2 0.016
negative regulation of small gtpase mediated signal transduction GO:0051058 1 0.016
macromolecule biosynthetic process GO:0009059 227 0.016
eye development GO:0001654 277 0.016
regulation of multicellular organismal development GO:2000026 223 0.015
cell projection organization GO:0030030 284 0.015
response to carbohydrate GO:0009743 3 0.015
sequestering of calcium ion GO:0051208 3 0.015
negative regulation of catabolic process GO:0009895 3 0.015
response to stress GO:0006950 263 0.015
regulation of developmental process GO:0050793 247 0.015
female sex differentiation GO:0046660 4 0.015
negative regulation of ras protein signal transduction GO:0046580 1 0.015
regulation of transcription from rna polymerase iii promoter GO:0006359 1 0.015
multi organism cellular process GO:0044764 2 0.015
peptidyl lysine acetylation GO:0018394 2 0.015
neuron differentiation GO:0030182 353 0.015
somite development GO:0061053 96 0.015
regulation of cell death GO:0010941 103 0.015
regulation of cellular component organization GO:0051128 86 0.015
regulation of response to extracellular stimulus GO:0032104 1 0.015
retina development in camera type eye GO:0060041 146 0.015
camera type eye development GO:0043010 222 0.015
negative regulation of cellular process GO:0048523 283 0.015
negative regulation of metabolic process GO:0009892 86 0.014
lateral inhibition GO:0046331 1 0.014
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
regulation of cellular metabolic process GO:0031323 320 0.014
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.014
intracellular transport GO:0046907 32 0.014
positive regulation of cell activation GO:0050867 1 0.014
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.014
positive regulation of chromosome organization GO:2001252 1 0.014
spermatid development GO:0007286 2 0.014
response to amino acid GO:0043200 2 0.014
growth GO:0040007 174 0.014
axon development GO:0061564 166 0.014
skeletal system morphogenesis GO:0048705 102 0.014
reproduction GO:0000003 40 0.014
response to glucose GO:0009749 3 0.014
small gtpase mediated signal transduction GO:0007264 8 0.014
release of sequestered calcium ion into cytosol GO:0051209 3 0.014
response to corticosteroid GO:0031960 1 0.014
calcium ion transport into cytosol GO:0060402 3 0.014
peptide transport GO:0015833 1 0.014
establishment of rna localization GO:0051236 3 0.014
microtubule cytoskeleton organization GO:0000226 33 0.014
mrna processing GO:0006397 14 0.014
regulation of cellular biosynthetic process GO:0031326 245 0.014
monocyte differentiation GO:0030224 2 0.014
skin development GO:0043588 54 0.014
response to chemical GO:0042221 320 0.014
meiotic cell cycle process GO:1903046 3 0.014
regulation of cytokine production GO:0001817 3 0.013
nucleoside monophosphate catabolic process GO:0009125 4 0.013
biosynthetic process GO:0009058 294 0.013
positive regulation of myeloid cell differentiation GO:0045639 2 0.013
cellular protein modification process GO:0006464 100 0.013
mitotic metaphase plate congression GO:0007080 1 0.013
regulation of mitotic cell cycle GO:0007346 25 0.013
positive regulation of response to stimulus GO:0048584 80 0.013
cellular component disassembly GO:0022411 1 0.013
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.013
regulation of neural precursor cell proliferation GO:2000177 3 0.013
positive regulation of cellular catabolic process GO:0031331 3 0.013
cell morphogenesis involved in differentiation GO:0000904 195 0.013
mitotic dna integrity checkpoint GO:0044774 4 0.013
cellular response to chemical stimulus GO:0070887 157 0.013
production of molecular mediator of immune response GO:0002440 2 0.013
positive regulation of ras protein signal transduction GO:0046579 1 0.013
protein modification process GO:0036211 100 0.013
tissue remodeling GO:0048771 4 0.013
nucleobase containing compound biosynthetic process GO:0034654 205 0.013
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.013
lymphocyte proliferation GO:0046651 1 0.013
intracellular mrna localization GO:0008298 1 0.013
generation of neurons GO:0048699 385 0.013
neuron projection guidance GO:0097485 86 0.013
cell cycle process GO:0022402 53 0.012
regulation of dendrite morphogenesis GO:0048814 3 0.012
neuronal stem cell maintenance GO:0097150 2 0.012
segment polarity determination GO:0007367 1 0.012
cellular response to stress GO:0033554 62 0.012
vesicle mediated transport GO:0016192 22 0.012
sex determination GO:0007530 1 0.012
peptidyl lysine trimethylation GO:0018023 1 0.012
gtp catabolic process GO:0006184 2 0.012
single organism cellular localization GO:1902580 46 0.012
pole plasm assembly GO:0007315 4 0.012
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 3 0.012
protein metabolic process GO:0019538 183 0.012
tube closure GO:0060606 1 0.012
cell proliferation GO:0008283 80 0.012
positive regulation of stem cell proliferation GO:2000648 1 0.012
regulation of reproductive process GO:2000241 4 0.012
negative regulation of defense response GO:0031348 2 0.012
mononuclear cell proliferation GO:0032943 1 0.012
regulation of translational initiation GO:0006446 1 0.012
regulation of localization GO:0032879 104 0.012
phosphate containing compound metabolic process GO:0006796 108 0.012
neural crest cell development GO:0014032 62 0.011
negative regulation of kinase activity GO:0033673 4 0.011
oocyte construction GO:0007308 5 0.011
cellular ketone metabolic process GO:0042180 11 0.011
viral process GO:0016032 1 0.011
negative regulation of secretion GO:0051048 2 0.011
mrna metabolic process GO:0016071 20 0.011
positive regulation of dna metabolic process GO:0051054 1 0.011
protein heterooligomerization GO:0051291 1 0.011
entrainment of circadian clock by photoperiod GO:0043153 1 0.011
apoptotic process GO:0006915 116 0.011
regulation of rna metabolic process GO:0051252 224 0.011
phosphorylation GO:0016310 69 0.011
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.011
leukocyte proliferation GO:0070661 1 0.011
regulation of cell cycle process GO:0010564 20 0.011
negative regulation of mrna processing GO:0050686 1 0.011
regulation of rho protein signal transduction GO:0035023 2 0.011
establishment of localization in cell GO:0051649 77 0.011
autophagy GO:0006914 4 0.011
centrosome cycle GO:0007098 1 0.011
mrna 3 end processing GO:0031124 2 0.011
negative regulation of cell communication GO:0010648 96 0.011
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.011
cell cycle GO:0007049 93 0.011
negative regulation of signal transduction GO:0009968 94 0.011
cellular macromolecule biosynthetic process GO:0034645 224 0.011
periodic partitioning GO:0007365 1 0.011
positive regulation of neural precursor cell proliferation GO:2000179 1 0.011
multicellular organismal macromolecule metabolic process GO:0044259 2 0.011
organelle organization GO:0006996 227 0.011
locomotor rhythm GO:0045475 3 0.011
neural tube development GO:0021915 62 0.010
organic acid metabolic process GO:0006082 31 0.010
cilium organization GO:0044782 71 0.010
positive regulation of cell division GO:0051781 2 0.010
protein polyubiquitination GO:0000209 4 0.010
negative regulation of multi organism process GO:0043901 3 0.010
regulation of cell shape GO:0008360 1 0.010
neurotransmitter transport GO:0006836 2 0.010
meiotic chromosome segregation GO:0045132 3 0.010
negative regulation of cytokine production GO:0001818 1 0.010
spermatid differentiation GO:0048515 2 0.010
response to monosaccharide GO:0034284 3 0.010
regulation of transport GO:0051049 45 0.010
regulation of nuclear division GO:0051783 9 0.010
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 1 0.010
response to uv GO:0009411 3 0.010
golgi vesicle transport GO:0048193 3 0.010
translational initiation GO:0006413 3 0.010
somitogenesis GO:0001756 87 0.010
regulation of epithelial cell proliferation GO:0050678 3 0.010
regulation of neurological system process GO:0031644 2 0.010
neurotransmitter secretion GO:0007269 2 0.010
cellular response to organic substance GO:0071310 105 0.010
regulation of sequestering of calcium ion GO:0051282 4 0.010
positive regulation of cellular amine metabolic process GO:0033240 0 0.010

srrm2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.067
nervous system disease DOID:863 0 0.024
myopathy DOID:423 0 0.020
muscular disease DOID:0080000 0 0.020
musculoskeletal system disease DOID:17 0 0.020
muscle tissue disease DOID:66 0 0.020
central nervous system disease DOID:331 0 0.020
neurodegenerative disease DOID:1289 0 0.020
cancer DOID:162 0 0.013
disease of cellular proliferation DOID:14566 0 0.013
organ system cancer DOID:0050686 0 0.013