Danio rerio

0 known processes

yipf3

Yip1 domain family, member 3

(Aliases: fj97f06,wu:fj97f06,zgc:55279)

yipf3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organelle fusion GO:0048284 3 0.125
larval development GO:0002164 2 0.120
signal transduction GO:0007165 455 0.102
modification dependent protein catabolic process GO:0019941 3 0.099
meiotic nuclear division GO:0007126 4 0.087
ubiquitin dependent protein catabolic process GO:0006511 3 0.084
proteasomal protein catabolic process GO:0010498 2 0.083
organelle organization GO:0006996 227 0.078
cellular response to extracellular stimulus GO:0031668 2 0.076
lipid catabolic process GO:0016042 4 0.075
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.064
meiotic cell cycle process GO:1903046 3 0.061
sensory organ development GO:0007423 393 0.060
establishment of localization GO:0051234 244 0.059
regulation of biological quality GO:0065008 263 0.059
maintenance of location GO:0051235 4 0.055
regulation of binding GO:0051098 3 0.052
cellular transition metal ion homeostasis GO:0046916 3 0.051
amine metabolic process GO:0009308 2 0.049
modification dependent macromolecule catabolic process GO:0043632 3 0.048
response to chemical GO:0042221 320 0.048
regulation of protein complex assembly GO:0043254 3 0.047
regulation of protein catabolic process GO:0042176 1 0.047
cellular response to nutrient levels GO:0031669 2 0.045
apoptotic process GO:0006915 116 0.045
cytoskeleton dependent cytokinesis GO:0061640 3 0.044
aging GO:0007568 2 0.044
regulation of reproductive process GO:2000241 4 0.044
regulation of meiotic cell cycle GO:0051445 1 0.043
cellular protein catabolic process GO:0044257 4 0.043
cell morphogenesis GO:0000902 289 0.042
cytokinesis GO:0000910 3 0.042
cellular response to external stimulus GO:0071496 2 0.042
response to other organism GO:0051707 97 0.040
stem cell division GO:0017145 1 0.040
small molecule metabolic process GO:0044281 77 0.040
death GO:0016265 121 0.040
organic acid metabolic process GO:0006082 31 0.039
response to topologically incorrect protein GO:0035966 2 0.038
endosomal transport GO:0016197 2 0.038
golgi vesicle transport GO:0048193 3 0.037
single organism metabolic process GO:0044710 217 0.036
negative regulation of biological process GO:0048519 304 0.036
cellular response to starvation GO:0009267 1 0.036
regulation of oocyte development GO:0060281 3 0.036
positive regulation of transport GO:0051050 2 0.036
exocytosis GO:0006887 1 0.035
regionalization GO:0003002 274 0.035
cellular amide metabolic process GO:0043603 4 0.035
er to golgi vesicle mediated transport GO:0006888 1 0.035
blood vessel development GO:0001568 246 0.035
cell projection organization GO:0030030 284 0.035
regulation of cellular ketone metabolic process GO:0010565 7 0.034
transport GO:0006810 220 0.034
eye development GO:0001654 277 0.034
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.033
regulation of tube size GO:0035150 2 0.033
cellular ketone metabolic process GO:0042180 11 0.032
regulation of receptor mediated endocytosis GO:0048259 4 0.032
negative regulation of protein complex assembly GO:0031333 1 0.032
positive regulation of cellular process GO:0048522 201 0.031
endoplasmic reticulum unfolded protein response GO:0030968 2 0.031
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.031
cellular amine metabolic process GO:0044106 2 0.031
negative regulation of cellular process GO:0048523 283 0.031
response to external stimulus GO:0009605 264 0.031
positive regulation of cell cycle GO:0045787 3 0.030
locomotion GO:0040011 313 0.029
regulation of multicellular organismal process GO:0051239 277 0.029
response to biotic stimulus GO:0009607 97 0.028
phagocytosis GO:0006909 3 0.028
negative regulation of defense response GO:0031348 2 0.028
oxoacid metabolic process GO:0043436 31 0.027
negative regulation of protein phosphorylation GO:0001933 4 0.027
regulation of synapse organization GO:0050807 3 0.027
positive regulation of map kinase activity GO:0043406 3 0.027
single organism localization GO:1902578 225 0.027
regulation of multicellular organismal development GO:2000026 223 0.026
cellular amino acid metabolic process GO:0006520 7 0.026
multicellular organismal signaling GO:0035637 22 0.026
regulation of metabolic process GO:0019222 359 0.026
segmentation GO:0035282 97 0.026
regulation of cell shape GO:0008360 1 0.026
compound eye development GO:0048749 2 0.026
cellular monovalent inorganic cation homeostasis GO:0030004 2 0.026
regulation of cellular amine metabolic process GO:0033238 0 0.025
lipid storage GO:0019915 1 0.025
homeostatic process GO:0042592 142 0.025
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.024
carboxylic acid metabolic process GO:0019752 22 0.024
establishment of protein localization to organelle GO:0072594 4 0.024
pole plasm assembly GO:0007315 4 0.024
cellular nitrogen compound metabolic process GO:0034641 290 0.023
response to organic substance GO:0010033 153 0.023
positive regulation of catabolic process GO:0009896 4 0.023
positive regulation of cellular component biogenesis GO:0044089 3 0.023
carbohydrate biosynthetic process GO:0016051 1 0.023
macroautophagy GO:0016236 1 0.023
protein secretion GO:0009306 1 0.022
cell death GO:0008219 121 0.022
programmed cell death GO:0012501 119 0.022
response to external biotic stimulus GO:0043207 97 0.022
autophagy GO:0006914 4 0.022
response to unfolded protein GO:0006986 2 0.022
regulation of multicellular organism growth GO:0040014 4 0.022
regulation of cell maturation GO:1903429 1 0.022
organonitrogen compound metabolic process GO:1901564 74 0.022
multicellular organism growth GO:0035264 4 0.021
intracellular signal transduction GO:0035556 85 0.021
antimicrobial humoral response GO:0019730 2 0.021
digestive system development GO:0055123 289 0.021
regulation of cytokine production GO:0001817 3 0.021
regulation of apoptotic process GO:0042981 98 0.021
synaptic growth at neuromuscular junction GO:0051124 2 0.021
brain development GO:0007420 293 0.020
rna localization GO:0006403 4 0.020
cellular component morphogenesis GO:0032989 336 0.020
sensory perception of chemical stimulus GO:0007606 3 0.020
regulation of cellular amino acid metabolic process GO:0006521 0 0.020
digestive tract development GO:0048565 265 0.020
regulation of ph GO:0006885 3 0.020
multi organism process GO:0051704 134 0.020
regulation of synaptic plasticity GO:0048167 1 0.019
small molecule catabolic process GO:0044282 3 0.019
regulation of cellular protein catabolic process GO:1903362 1 0.019
mitotic cytokinesis GO:0000281 3 0.019
nucleic acid templated transcription GO:0097659 181 0.019
oocyte anterior posterior axis specification GO:0007314 4 0.019
neuronal action potential GO:0019228 18 0.019
cellular component biogenesis GO:0044085 178 0.019
gtp metabolic process GO:0046039 4 0.019
regulation of response to stimulus GO:0048583 269 0.019
microtubule organizing center organization GO:0031023 1 0.019
heterocycle biosynthetic process GO:0018130 215 0.019
cell substrate adhesion GO:0031589 4 0.018
cellular response to topologically incorrect protein GO:0035967 2 0.018
lateral inhibition GO:0046331 1 0.018
central nervous system development GO:0007417 387 0.018
organic substance biosynthetic process GO:1901576 289 0.018
positive regulation of cytoskeleton organization GO:0051495 3 0.018
germ line stem cell division GO:0042078 1 0.018
protein metabolic process GO:0019538 183 0.018
cellular response to organic substance GO:0071310 105 0.018
guanosine containing compound catabolic process GO:1901069 2 0.018
er nucleus signaling pathway GO:0006984 2 0.017
regulation of synapse assembly GO:0051963 3 0.017
single organism organelle organization GO:1902589 199 0.017
cellular macromolecule metabolic process GO:0044260 391 0.017
cell surface receptor signaling pathway GO:0007166 325 0.017
oocyte maturation GO:0001556 4 0.017
organic cyclic compound metabolic process GO:1901360 301 0.017
regulation of cell death GO:0010941 103 0.017
protein polyubiquitination GO:0000209 4 0.017
multicellular organismal reproductive process GO:0048609 35 0.017
cell part morphogenesis GO:0032990 246 0.017
chemical homeostasis GO:0048878 49 0.017
response to drug GO:0042493 3 0.017
regulation of reactive oxygen species metabolic process GO:2000377 2 0.017
regulation of protein ubiquitination GO:0031396 3 0.017
regulation of cell communication GO:0010646 232 0.016
oxidation reduction process GO:0055114 41 0.016
organic acid catabolic process GO:0016054 3 0.016
negative regulation of synapse assembly GO:0051964 2 0.016
anterior posterior pattern specification GO:0009952 152 0.016
positive regulation of reproductive process GO:2000243 2 0.016
gene expression GO:0010467 252 0.016
golgi organization GO:0007030 1 0.016
regulation of chromosome segregation GO:0051983 1 0.016
activation of mapk activity GO:0000187 3 0.016
macromolecule biosynthetic process GO:0009059 227 0.016
regulation of cytoplasmic transport GO:1903649 4 0.016
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.015
defense response GO:0006952 47 0.015
regulation of intracellular ph GO:0051453 1 0.015
guanosine containing compound metabolic process GO:1901068 4 0.015
cell projection morphogenesis GO:0048858 244 0.015
cellular response to chemical stimulus GO:0070887 157 0.015
regulation of cellular component organization GO:0051128 86 0.015
positive regulation of cell division GO:0051781 2 0.015
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.015
nucleobase containing compound metabolic process GO:0006139 274 0.015
cellular biosynthetic process GO:0044249 286 0.015
immune response GO:0006955 28 0.015
regulation of metal ion transport GO:0010959 4 0.015
regulation of calcium ion transport GO:0051924 2 0.015
negative regulation of kinase activity GO:0033673 4 0.014
positive regulation of i kappab kinase nf kappab signaling GO:0043123 3 0.014
positive regulation of protein complex assembly GO:0031334 2 0.014
signal transduction in absence of ligand GO:0038034 1 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
enzyme linked receptor protein signaling pathway GO:0007167 106 0.014
regulation of response to biotic stimulus GO:0002831 2 0.014
positive regulation of cellular catabolic process GO:0031331 3 0.014
regulation of cell differentiation GO:0045595 142 0.014
adult behavior GO:0030534 2 0.014
cell morphogenesis involved in differentiation GO:0000904 195 0.014
regulation of programmed cell death GO:0043067 101 0.014
regulation of jun kinase activity GO:0043506 3 0.014
regulation of localization GO:0032879 104 0.014
protein import GO:0017038 3 0.014
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.014
negative regulation of protein kinase activity GO:0006469 4 0.014
cellular protein modification process GO:0006464 100 0.014
single organism transport GO:0044765 206 0.014
regulation of microtubule cytoskeleton organization GO:0070507 3 0.014
regulation of nitrogen compound metabolic process GO:0051171 251 0.014
growth GO:0040007 174 0.014
cellular response to endogenous stimulus GO:0071495 68 0.013
stem cell maintenance GO:0019827 4 0.013
centrosome organization GO:0051297 1 0.013
regulation of blood vessel size GO:0050880 2 0.013
cell fate commitment GO:0045165 99 0.013
transmembrane transport GO:0055085 120 0.013
positive regulation of multi organism process GO:0043902 3 0.013
cognition GO:0050890 1 0.013
macromolecule deacylation GO:0098732 3 0.013
neuroblast proliferation GO:0007405 2 0.013
regulation of protein transport GO:0051223 3 0.013
ion homeostasis GO:0050801 41 0.013
cellular respiration GO:0045333 3 0.013
double strand break repair GO:0006302 3 0.013
single organism membrane fusion GO:0044801 2 0.013
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.013
cation homeostasis GO:0055080 33 0.013
interspecies interaction between organisms GO:0044419 4 0.013
positive regulation of secretion by cell GO:1903532 1 0.013
peptidyl threonine modification GO:0018210 1 0.013
cellular response to radiation GO:0071478 4 0.013
alternative mrna splicing via spliceosome GO:0000380 1 0.013
macromolecule localization GO:0033036 54 0.013
i kappab kinase nf kappab signaling GO:0007249 4 0.013
positive regulation of signaling GO:0023056 56 0.013
proepicardium development GO:0003342 4 0.013
cytoplasm organization GO:0007028 4 0.013
female gonad development GO:0008585 4 0.012
digestive tract morphogenesis GO:0048546 231 0.012
protein localization GO:0008104 40 0.012
spermatid differentiation GO:0048515 2 0.012
regulation of establishment of protein localization GO:0070201 4 0.012
neuron differentiation GO:0030182 353 0.012
centrosome cycle GO:0007098 1 0.012
head development GO:0060322 303 0.012
cellular component assembly involved in morphogenesis GO:0010927 107 0.012
tissue remodeling GO:0048771 4 0.012
gtp catabolic process GO:0006184 2 0.012
negative regulation of catabolic process GO:0009895 3 0.012
stem cell development GO:0048864 82 0.012
regulation of epithelial cell proliferation GO:0050678 3 0.012
transmission of nerve impulse GO:0019226 19 0.012
cellular carbohydrate metabolic process GO:0044262 4 0.012
negative regulation of blood circulation GO:1903523 2 0.012
intracellular mrna localization GO:0008298 1 0.012
regulation of cell activation GO:0050865 1 0.012
regulation of signal transduction GO:0009966 225 0.012
regulation of cell development GO:0060284 100 0.012
extrinsic apoptotic signaling pathway GO:0097191 3 0.012
regulation of anatomical structure morphogenesis GO:0022603 130 0.012
organic substance transport GO:0071702 58 0.012
metal ion homeostasis GO:0055065 26 0.012
cellular response to unfolded protein GO:0034620 2 0.012
phosphorus metabolic process GO:0006793 109 0.012
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.012
cellular protein metabolic process GO:0044267 129 0.012
response to stress GO:0006950 263 0.011
somitogenesis GO:0001756 87 0.011
regulation of developmental process GO:0050793 247 0.011
response to nutrient GO:0007584 3 0.011
response to corticosteroid GO:0031960 1 0.011
morphogenesis of an epithelium GO:0002009 333 0.011
circulatory system process GO:0003013 87 0.011
primary neural tube formation GO:0014020 1 0.011
regulation of carbohydrate metabolic process GO:0006109 4 0.011
regulation of inflammatory response GO:0050727 2 0.011
nitrogen compound metabolic process GO:0006807 319 0.011
positive regulation of cell death GO:0010942 29 0.011
peptidyl threonine phosphorylation GO:0018107 1 0.011
peptide metabolic process GO:0006518 1 0.011
cartilage development GO:0051216 96 0.011
spermatid development GO:0007286 2 0.011
macromolecular complex subunit organization GO:0043933 74 0.011
regulation of primary metabolic process GO:0080090 311 0.011
germ line stem cell maintenance GO:0030718 2 0.011
regulation of growth rate GO:0040009 1 0.011
positive regulation of chromatin modification GO:1903310 1 0.011
hormone biosynthetic process GO:0042446 3 0.011
phagocytosis engulfment GO:0006911 1 0.011
hormone transport GO:0009914 2 0.011
microtubule based process GO:0007017 60 0.011
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.011
glycoprotein metabolic process GO:0009100 23 0.011
regulation of fatty acid metabolic process GO:0019217 1 0.011
immune system process GO:0002376 241 0.011
gastrulation GO:0007369 208 0.011
axon development GO:0061564 166 0.011
nephron epithelium morphogenesis GO:0072088 1 0.011
cellular response to stress GO:0033554 62 0.011
aromatic compound biosynthetic process GO:0019438 217 0.011
negative regulation of epithelial cell proliferation GO:0050680 1 0.011
neuron projection morphogenesis GO:0048812 161 0.011
positive regulation of ras protein signal transduction GO:0046579 1 0.011
heterocycle metabolic process GO:0046483 290 0.011
production of molecular mediator of immune response GO:0002440 2 0.010
sequestering of metal ion GO:0051238 3 0.010
chromosome organization involved in meiosis GO:0070192 1 0.010
positive regulation of stem cell proliferation GO:2000648 1 0.010
vasculature development GO:0001944 278 0.010
macromolecule modification GO:0043412 111 0.010
single organism nuclear import GO:1902593 3 0.010
erk1 and erk2 cascade GO:0070371 4 0.010
positive regulation of signal transduction GO:0009967 56 0.010
negative regulation of macromolecule metabolic process GO:0010605 76 0.010
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.010
regulation of histone methylation GO:0031060 3 0.010
glial cell migration GO:0008347 3 0.010
gamete generation GO:0007276 33 0.010
neurological system process GO:0050877 62 0.010
negative regulation of multi organism process GO:0043901 3 0.010
membrane invagination GO:0010324 1 0.010
cellular component movement GO:0006928 335 0.010
regulation of membrane potential GO:0042391 23 0.010
inositol lipid mediated signaling GO:0048017 2 0.010
positive regulation of oocyte development GO:0060282 1 0.010
outflow tract morphogenesis GO:0003151 1 0.010
peptide transport GO:0015833 1 0.010
recombinational repair GO:0000725 1 0.010

yipf3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of metabolism DOID:0014667 0 0.059
inherited metabolic disorder DOID:655 0 0.049
disease of anatomical entity DOID:7 0 0.039
nervous system disease DOID:863 0 0.021
lipid storage disease DOID:9455 0 0.016
lysosomal storage disease DOID:3211 0 0.016
musculoskeletal system disease DOID:17 0 0.015
disease of cellular proliferation DOID:14566 0 0.011
cancer DOID:162 0 0.010