Process View
The network for 'snorna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.
Name | Description | Probability | Func Analog Organism |
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Name | Description | Probability | Func Analog Organism |
---|---|---|---|
EXOSC3 | exosome component 3 | 0.574 | |
RTF1 | Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.082 | |
COIL | coilin | 0.066 | |
DIS3L | DIS3 mitotic control homolog (S. cerevisiae)-like | 0.051 | |
LEO1 | Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.048 | |
EXOSC2 | exosome component 2 | 0.043 | |
EXOSC7 | exosome component 7 | 0.041 | |
GPKOW | G patch domain and KOW motifs | 0.038 | |
HNRNPF | heterogeneous nuclear ribonucleoprotein F | 0.035 | |
NOP56 | NOP56 ribonucleoprotein homolog (yeast) | 0.033 | |
DHX38 | DEAH (Asp-Glu-Ala-His) box polypeptide 38 | 0.029 | |
SART3 | squamous cell carcinoma antigen recognized by T cells 3 | 0.025 | |
EXOSC9 | exosome component 9 | 0.025 | |
EXOSC5 | exosome component 5 | 0.024 | |
CELF1 | CUGBP, Elav-like family member 1 | 0.014 | |
PUF60 | poly-U binding splicing factor 60KDa | 0.013 | |
EXOSC10 | exosome component 10 | 0.012 | |
RBMX | RNA binding motif protein, X-linked | 0.012 | |
DIS3 | DIS3 mitotic control homolog (S. cerevisiae) | 0.012 | |
EXOSC1 | exosome component 1 | 0.012 | |
HNRNPD | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | 0.011 | |
DDX23 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 | 0.011 | |
AEBP2 | AE binding protein 2 | 0.011 | |
HNRNPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | 0.010 | |
BUD13 | BUD13 homolog (S. cerevisiae) | 0.010 | |
XAB2 | XPA binding protein 2 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
U2af1 | U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 | 0.532 | |
Stip1 | stress-induced phosphoprotein 1 | 0.199 | |
Sfpq | splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) | 0.190 | |
Cstf2t | cleavage stimulation factor, 3' pre-RNA subunit 2, tau | 0.118 | |
Ncbp2 | nuclear cap binding protein subunit 2 | 0.094 | |
Prmt1 | protein arginine N-methyltransferase 1 | 0.074 | |
2500003M10Rik | RIKEN cDNA 2500003M10 gene | 0.073 | |
Nop56 | NOP56 ribonucleoprotein homolog (yeast) | 0.071 | |
Ythdf1 | YTH domain family 1 | 0.065 | |
Nono | non-POU-domain-containing, octamer binding protein | 0.062 | |
Hsph1 | heat shock 105kDa/110kDa protein 1 | 0.058 | |
Ftsj3 | FtsJ homolog 3 (E. coli) | 0.056 | |
Nolc1 | nucleolar and coiled-body phosphoprotein 1 | 0.055 | |
Cdk9 | cyclin-dependent kinase 9 (CDC2-related kinase) | 0.055 | |
Pprc1 | peroxisome proliferative activated receptor, gamma, coactivator-related 1 | 0.043 | |
Impdh2 | inosine 5'-phosphate dehydrogenase 2 | 0.042 | |
Ctcf | CCCTC-binding factor | 0.041 | |
Ilf2 | interleukin enhancer binding factor 2 | 0.041 | |
Wdr77 | WD repeat domain 77 | 0.039 | |
Elp2 | elongation protein 2 homolog (S. cerevisiae) | 0.038 | |
Ddx18 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 | 0.036 | |
Rrp1b | ribosomal RNA processing 1 homolog B (S. cerevisiae) | 0.036 | |
Gar1 | GAR1 ribonucleoprotein homolog (yeast) | 0.035 | |
Ncl | nucleolin | 0.032 | |
Rpl7l1 | ribosomal protein L7-like 1 | 0.029 | |
Hnrnpab | heterogeneous nuclear ribonucleoprotein A/B | 0.026 | |
Ilf3 | interleukin enhancer binding factor 3 | 0.025 | |
Ppan | peter pan homolog (Drosophila) | 0.024 | |
Cand1 | cullin associated and neddylation disassociated 1 | 0.024 | |
Ptges3 | prostaglandin E synthase 3 (cytosolic) | 0.023 | |
Rbm8a | RNA binding motif protein 8a | 0.023 | |
Usp10 | ubiquitin specific peptidase 10 | 0.021 | |
Sae1 | SUMO1 activating enzyme subunit 1 | 0.021 | |
Pafah1b2 | platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 | 0.020 | |
D19Bwg1357e | DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed | 0.020 | |
Srsf1 | serine/arginine-rich splicing factor 1 | 0.020 | |
Tada1 | transcriptional adaptor 1 | 0.019 | |
Bms1 | BMS1 homolog, ribosome assembly protein (yeast) | 0.018 | |
Prpf3 | PRP3 pre-mRNA processing factor 3 homolog (yeast) | 0.018 | |
Surf6 | surfeit gene 6 | 0.018 | |
D10Wsu52e | DNA segment, Chr 10, Wayne State University 52, expressed | 0.017 | |
Zc3h18 | zinc finger CCCH-type containing 18 | 0.017 | |
Dhx9 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 | 0.016 | |
Rrp1 | ribosomal RNA processing 1 homolog (S. cerevisiae) | 0.016 | |
Mybbp1a | MYB binding protein (P160) 1a | 0.015 | |
Hnrnpf | heterogeneous nuclear ribonucleoprotein F | 0.015 | |
Srsf9 | serine/arginine-rich splicing factor 9 | 0.015 | |
Prmt5 | protein arginine N-methyltransferase 5 | 0.015 | |
Ruvbl1 | RuvB-like protein 1 | 0.014 | |
Sf3a3 | splicing factor 3a, subunit 3 | 0.014 | |
Rcc2 | regulator of chromosome condensation 2 | 0.014 | |
Rbm10 | RNA binding motif protein 10 | 0.014 | |
Paf1 | Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) | 0.014 | |
Nsun2 | NOL1/NOP2/Sun domain family member 2 | 0.013 | |
Ddx21 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 | 0.013 | |
Hsp90ab1 | heat shock protein 90 alpha (cytosolic), class B member 1 | 0.013 | |
Rpusd4 | RNA pseudouridylate synthase domain containing 4 | 0.013 | |
Cct3 | chaperonin containing Tcp1, subunit 3 (gamma) | 0.013 | |
Ttc27 | tetratricopeptide repeat domain 27 | 0.013 | |
Pitpnb | phosphatidylinositol transfer protein, beta | 0.013 | |
Rsl24d1 | ribosomal L24 domain containing 1 | 0.013 | |
D10Wsu102e | DNA segment, Chr 10, Wayne State University 102, expressed | 0.012 | |
Thumpd1 | THUMP domain containing 1 | 0.012 | |
Mettl3 | methyltransferase like 3 | 0.012 | |
Dkc1 | dyskeratosis congenita 1, dyskerin homolog (human) | 0.012 | |
Wdr5 | WD repeat domain 5 | 0.012 | |
Tubgcp3 | tubulin, gamma complex associated protein 3 | 0.012 | |
Cse1l | chromosome segregation 1-like (S. cerevisiae) | 0.012 | |
Prpsap2 | phosphoribosyl pyrophosphate synthetase-associated protein 2 | 0.012 | |
Plrg1 | pleiotropic regulator 1, PRL1 homolog (Arabidopsis) | 0.012 | |
Prmt3 | protein arginine N-methyltransferase 3 | 0.011 | |
Ywhae | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide | 0.011 | |
Hspa8 | heat shock protein 8 | 0.011 | |
Exosc10 | exosome component 10 | 0.011 | |
Aqr | aquarius | 0.011 | |
Exosc7 | exosome component 7 | 0.010 | |
Rbmxrt | RNA binding motif protein, X chromosome retrogene | 0.010 | |
Hnrnpm | heterogeneous nuclear ribonucleoprotein M | 0.010 | |
Wdr43 | WD repeat domain 43 | 0.010 | |
2400003C14Rik | RIKEN cDNA 2400003C14 gene | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
POP1 | Pop1p | 0.979 | |
POP4 | Pop4p | 0.960 | |
PAP2 | Pap2p | 0.913 | |
LEO1 | Leo1p | 0.887 | |
NRD1 | Nrd1p | 0.872 | |
POP6 | Pop6p | 0.792 | |
SEN1 | Sen1p | 0.784 | |
RPP1 | Rpp1p | 0.755 | |
POP7 | Pop7p | 0.654 | |
AIR2 | Air2p | 0.607 | |
NAB3 | Nab3p | 0.588 | |
SNM1 | Snm1p | 0.588 | |
POP3 | Pop3p | 0.568 | |
RIO1 | Rio1p | 0.559 | |
MTR4 | Mtr4p | 0.505 | |
RRP6 | Rrp6p | 0.440 | |
RPO21 | Rpo21p | 0.423 | |
RRP45 | Rrp45p | 0.416 | |
RMP1 | Rmp1p | 0.407 | |
SET1 | Set1p | 0.374 | |
PTI1 | Pti1p | 0.361 | |
SPT5 | Spt5p | 0.289 | |
CSL4 | Csl4p | 0.247 | |
PTA1 | Pta1p | 0.245 | |
DED1 | Ded1p | 0.226 | |
MPP6 | Mpp6p | 0.225 | |
SSU72 | Ssu72p | 0.202 | |
RRP40 | Rrp40p | 0.195 | |
RRN7 | Rrn7p | 0.174 | |
CFT2 | Cft2p | 0.154 | |
PRP43 | Prp43p | 0.148 | |
POP5 | Pop5p | 0.138 | |
TRL1 | Trl1p | 0.132 | |
SKI7 | Ski7p | 0.128 | |
UTP25 | Utp25p | 0.124 | |
NOP10 | Nop10p | 0.118 | |
RPR2 | Rpr2p | 0.116 | |
NPL3 | Npl3p | 0.112 | |
AIR1 | Air1p | 0.105 | |
RRP46 | Rrp46p | 0.102 | |
RAT1 | Rat1p | 0.100 | |
JJJ1 | Jjj1p | 0.093 | |
SYC1 | Syc1p | 0.090 | |
THP2 | Thp2p | 0.088 | |
POL2 | Pol2p | 0.081 | |
MTR3 | Mtr3p | 0.080 | |
PRP31 | Prp31p | 0.073 | |
NOP56 | Nop56p | 0.073 | |
EBS1 | Ebs1p | 0.072 | |
RRP4 | Rrp4p | 0.070 | |
URB2 | Urb2p | 0.070 | |
CTR9 | Ctr9p | 0.067 | |
YGL101W | hypothetical protein | 0.066 | |
YGR093W | hypothetical protein | 0.065 | |
LCP5 | Lcp5p | 0.061 | |
FHL1 | Fhl1p | 0.060 | |
FAF1 | Faf1p | 0.059 | |
BUD23 | Bud23p | 0.059 | |
FCP1 | Fcp1p | 0.059 | |
NAF1 | Naf1p | 0.058 | |
MPE1 | Mpe1p | 0.057 | |
YGR251W | hypothetical protein | 0.057 | |
LRP1 | Lrp1p | 0.055 | |
PUB1 | Pub1p | 0.053 | |
REF2 | Ref2p | 0.052 | |
YLR264C-A | hypothetical protein | 0.050 | |
FIP1 | Fip1p | 0.050 | |
ARG8 | Arg8p | 0.050 | |
URA3 | Ura3p | 0.050 | |
SRD1 | Srd1p | 0.050 | |
YOR390W | hypothetical protein | 0.049 | |
POP8 | Pop8p | 0.047 | |
RPC31 | Rpc31p | 0.047 | |
SUB1 | Sub1p | 0.046 | |
THG1 | Thg1p | 0.046 | |
CUP1-1 | Cup1-1p | 0.045 | |
RNH70 | Rnh70p | 0.045 | |
KEM1 | Kem1p | 0.045 | |
ARP10 | Arp10p | 0.043 | |
URM1 | Urm1p | 0.043 | |
LEU2 | Leu2p | 0.042 | |
UTP8 | Utp8p | 0.041 | |
VAC17 | Vac17p | 0.041 | |
RRP14 | Rrp14p | 0.041 | |
MER1 | Mer1p | 0.040 | |
YOL038C-A | hypothetical protein | 0.039 | |
HIT1 | Hit1p | 0.039 | |
YER137C | hypothetical protein | 0.037 | |
YLR162W | hypothetical protein | 0.037 | |
UTP9 | Utp9p | 0.035 | |
APT2 | Apt2p | 0.035 | |
CUE2 | Cue2p | 0.034 | |
HO | Hop | 0.034 | |
YPR157W | hypothetical protein | 0.034 | |
BSC1 | Bsc1p | 0.034 | |
YLR042C | hypothetical protein | 0.034 | |
SKI2 | Ski2p | 0.033 | |
DCD1 | Dcd1p | 0.033 | |
ATP6 | Atp6p | 0.033 | |
YAR068W | hypothetical protein | 0.033 |