Process View
The network for 'positive regulation of gastrulation' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
Any process that activates or increases the frequency, rate or extent of gastrulation.
Name | Description | Probability | Func Analog Organism |
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Name | Description | Probability | Func Analog Organism |
---|---|---|---|
osr1 | odd-skipped related 1 (Drosophila) | 0.913 | |
tbx5a | T-box 5a | 0.831 | |
foxa3 | forkhead box A3 | 0.212 | |
efnb2a | ephrin B2a | 0.205 | |
foxj1a | forkhead box J1a | 0.203 | |
shhb | sonic hedgehog b | 0.198 | |
osr2 | odd-skipped related 2 (Drosophila) | 0.188 | |
foxn4 | forkhead box N4 | 0.182 | |
jag1b | jagged 1b | 0.180 | |
sox2 | SRY-box containing gene 2 | 0.178 | |
foxa1 | forkhead box A1 | 0.176 | |
cdh2 | cadherin 2, neuronal | 0.172 | |
hnf1ba | HNF1 homeobox Ba | 0.171 | |
etv2 | ets variant gene 2 | 0.155 | |
bmp4 | bone morphogenetic protein 4 | 0.153 | |
lmx1b.1 | LIM homeobox transcription factor 1, beta 1 | 0.147 | |
wt1b | wilms tumor 1b | 0.139 | |
notch3 | notch homolog 3 | 0.135 | |
notch1a | notch homolog 1a | 0.130 | |
pcdh18b | protocadherin 18b | 0.130 | |
nkx2.2a | NK2 transcription factor related 2a | 0.128 | |
lhx5 | LIM homeobox 5 | 0.119 | |
dlx3b | distal-less homeobox gene 3b | 0.118 | |
raraa | retinoic acid receptor, alpha a | 0.114 | |
rfx2 | regulatory factor X, 2 (influences HLA class II expression) | 0.107 | |
tcf7 | transcription factor 7 (T-cell specific, HMG-box) | 0.100 | |
jag2 | jagged 2 | 0.095 | |
twist2 | twist2 | 0.091 | |
nkd1 | naked cuticle homolog 1 (Drosophila) | 0.089 | |
lmx1b.2 | LIM homeobox transcription factor 1, beta 2 | 0.087 | |
foxb1.2 | forkhead box B1.2 | 0.085 | |
gsc | goosecoid | 0.082 | |
fli1a | friend leukemia integration 1a | 0.081 | |
scube2 | signal peptide, CUB domain, EGF-like 2 | 0.080 | |
wnt1 | wingless-type MMTV integration site family, member 1 | 0.078 | |
hnf1bb | HNF1 homeobox Bb | 0.077 | |
mecom | MDS1 and EVI1 complex locus | 0.074 | |
wnt9a | wingless-type MMTV integration site family, member 9A | 0.073 | |
dld | deltaD | 0.069 | |
foxj1b | forkhead box J1b | 0.067 | |
gata6 | GATA-binding protein 6 | 0.066 | |
nkx6.1 | NK6 transcription factor related, locus 1 (Drosophila) | 0.063 | |
foxc1a | forkhead box C1a | 0.062 | |
dact2 | dapper homolog 2, antagonist of beta-catenin (xenopus) | 0.060 | |
col2a1a | collagen type II, alpha-1a | 0.059 | |
ascl1a | achaete-scute complex-like 1a (Drosophila) | 0.058 | |
dcc | deleted in colorectal carcinoma | 0.058 | |
shha | sonic hedgehog a | 0.058 | |
hhex | hematopoietically expressed homeobox | 0.057 | |
meis3 | myeloid ecotropic viral integration site 3 | 0.056 | |
neurod4 | neurogenic differentiation 4 | 0.055 | |
gh1 | growth hormone 1 | 0.054 | |
bmper | BMP binding endothelial regulator | 0.054 | |
barhl2 | BarH-like 2 | 0.051 | |
gyltl1b | glycosyltransferase-like 1b | 0.050 | |
th | tyrosine hydroxylase | 0.048 | |
dlc | deltaC | 0.047 | |
kdrl | kinase insert domain receptor like | 0.046 | |
irx1b | iroquois homeobox protein 1, b | 0.045 | |
dla | deltaA | 0.044 | |
gata2a | GATA-binding protein 2a | 0.044 | |
pitx2 | paired-like homeodomain transcription factor 2 | 0.043 | |
elavl3 | ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) | 0.043 | |
myod1 | myogenic differentiation 1 | 0.042 | |
eya1 | eyes absent homolog 1 | 0.042 | |
hey2 | hairy/enhancer-of-split related with YRPW motif 2 | 0.042 | |
tshb | thyroid stimulating hormone, beta subunit | 0.041 | |
epha4a | eph receptor A4a | 0.041 | |
emx1 | empty spiracles homeobox 1 | 0.040 | |
wnt2bb | wingless-type MMTV integration site family, member 2Bb | 0.039 | |
twist1a | twist1a | 0.039 | |
aldh1a2 | aldehyde dehydrogenase 1 family, member A2 | 0.039 | |
wif1 | wnt inhibitory factor 1 | 0.039 | |
dbx1a | developing brain homeobox 1a | 0.038 | |
foxd3 | forkhead box D3 | 0.037 | |
pea3 | ETS-domain transcription factor pea3 | 0.037 | |
lhx2b | LIM homeobox 2b | 0.037 | |
hoxc4a | homeo box C4a | 0.037 | |
dlx2a | distal-less homeobox gene 2a | 0.036 | |
neo1 | neogenin 1 | 0.035 | |
six4b | sine oculis homeobox homolog 4b | 0.035 | |
tcf7l2 | transcription factor 7-like 2 (T-cell specific, HMG-box) | 0.034 | |
ascl1b | achaete-scute complex-like 1b (Drosophila) | 0.033 | |
hoxb1a | homeo box B1a | 0.033 | |
olig2 | oligodendrocyte lineage transcription factor 2 | 0.033 | |
sim1a | single-minded homolog 1a (Drosophila) | 0.032 | |
pkd2 | polycystic kidney disease 2 | 0.032 | |
her9 | hairy-related 9 | 0.032 | |
pbx4 | pre-B-cell leukemia transcription factor 4 | 0.032 | |
hoxd3a | homeo box D3a | 0.031 | |
nkx2.3 | NK2 transcription factor related 3 | 0.030 | |
ptch1 | patched 1 | 0.030 | |
gbx2 | gastrulation brain homeo box 2 | 0.028 | |
pcdh18a | protocadherin 18a | 0.028 | |
gata1a | GATA binding protein 1a | 0.028 | |
cyp26c1 | cytochrome P450, family 26, subfamily C, polypeptide 1 | 0.027 | |
foxp2 | forkhead box P2 | 0.027 | |
ptgs1 | prostaglandin-endoperoxide synthase 1 | 0.027 | |
dkk1b | dickkopf 1b | 0.027 | |
fgf3 | fibroblast growth factor 3 | 0.027 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
NOTCH3 | notch 3 | 0.455 | |
JAG1 | jagged 1 | 0.199 | |
RBPJ | recombination signal binding protein for immunoglobulin kappa J region | 0.117 | |
EIF3L | eukaryotic translation initiation factor 3, subunit L | 0.103 | |
EEF2 | eukaryotic translation elongation factor 2 | 0.063 | |
FZD1 | frizzled homolog 1 (Drosophila) | 0.058 | |
MAML1 | mastermind-like 1 (Drosophila) | 0.056 | |
EIF3D | eukaryotic translation initiation factor 3, subunit D | 0.051 | |
SLC25A6 | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 | 0.049 | |
PRPF6 | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) | 0.030 | |
EIF3F | eukaryotic translation initiation factor 3, subunit F | 0.028 | |
RPL3 | ribosomal protein L3 | 0.028 | |
RPL8 | ribosomal protein L8 | 0.020 | |
VHL | von Hippel-Lindau tumor suppressor | 0.019 | |
SPEN | spen homolog, transcriptional regulator (Drosophila) | 0.016 | |
WDR83 | WD repeat domain 83 | 0.015 | |
DYNLL1 | dynein, light chain, LC8-type 1 | 0.015 | |
DGCR14 | DiGeorge syndrome critical region gene 14 | 0.013 | |
IFNAR2 | interferon (alpha, beta and omega) receptor 2 | 0.013 | |
RPL27A | ribosomal protein L27a | 0.012 | |
XIAP | X-linked inhibitor of apoptosis | 0.012 | |
NOTCH2 | notch 2 | 0.011 | |
EIF3H | eukaryotic translation initiation factor 3, subunit H | 0.011 | |
QARS | glutaminyl-tRNA synthetase | 0.010 | |
EEF1D | eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Otx2 | orthodenticle homolog 2 (Drosophila) | 0.986 | |
Pax6 | paired box gene 6 | 0.928 | |
Shh | sonic hedgehog | 0.890 | |
Pax2 | paired box gene 2 | 0.830 | |
Pax3 | paired box gene 3 | 0.641 | |
Foxc1 | forkhead box C1 | 0.586 | |
Lhx1 | LIM homeobox protein 1 | 0.490 | |
Ascl1 | achaete-scute complex homolog 1 (Drosophila) | 0.413 | |
Neurod1 | neurogenic differentiation 1 | 0.362 | |
Isl1 | ISL1 transcription factor, LIM/homeodomain | 0.324 | |
Gli3 | GLI-Kruppel family member GLI3 | 0.309 | |
Foxg1 | forkhead box G1 | 0.274 | |
En1 | engrailed 1 | 0.262 | |
Pitx2 | paired-like homeodomain transcription factor 2 | 0.228 | |
Mycn | v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) | 0.201 | |
Foxa2 | forkhead box A2 | 0.201 | |
Neurog2 | neurogenin 2 | 0.187 | |
Ptf1a | pancreas specific transcription factor, 1a | 0.178 | |
Pou4f2 | POU domain, class 4, transcription factor 2 | 0.173 | |
Emx2 | empty spiracles homolog 2 (Drosophila) | 0.170 | |
Emx1 | empty spiracles homolog 1 (Drosophila) | 0.170 | |
Hand2 | heart and neural crest derivatives expressed transcript 2 | 0.159 | |
Lhx9 | LIM homeobox protein 9 | 0.159 | |
Fgf8 | fibroblast growth factor 8 | 0.134 | |
Hoxa1 | homeobox A1 | 0.106 | |
Hoxd11 | homeobox D11 | 0.101 | |
Tbx1 | T-box 1 | 0.101 | |
Gbx2 | gastrulation brain homeobox 2 | 0.097 | |
Hoxd13 | homeobox D13 | 0.082 | |
Tcfap2a | transcription factor AP-2, alpha | 0.068 | |
Msx1 | homeobox, msh-like 1 | 0.067 | |
Foxc2 | forkhead box C2 | 0.061 | |
Hoxd3 | homeobox D3 | 0.052 | |
Insm1 | insulinoma-associated 1 | 0.048 | |
Pax8 | paired box gene 8 | 0.046 | |
Gsc | goosecoid homeobox | 0.042 | |
Wt1 | Wilms tumor 1 homolog | 0.041 | |
Gdnf | glial cell line derived neurotrophic factor | 0.039 | |
Hmx1 | H6 homeobox 1 | 0.038 | |
Onecut1 | one cut domain, family member 1 | 0.038 | |
Fgfr2 | fibroblast growth factor receptor 2 | 0.037 | |
Dlx2 | distal-less homeobox 2 | 0.037 | |
Pax9 | paired box gene 9 | 0.037 | |
Dlx1 | distal-less homeobox 1 | 0.036 | |
Pdx1 | pancreatic and duodenal homeobox 1 | 0.035 | |
Hes5 | hairy and enhancer of split 5 (Drosophila) | 0.035 | |
Lmx1b | LIM homeobox transcription factor 1 beta | 0.035 | |
Six1 | sine oculis-related homeobox 1 homolog (Drosophila) | 0.033 | |
Chd7 | chromodomain helicase DNA binding protein 7 | 0.030 | |
Pitx1 | paired-like homeodomain transcription factor 1 | 0.029 | |
Sox2 | SRY-box containing gene 2 | 0.029 | |
Sox11 | SRY-box containing gene 11 | 0.029 | |
Nkx2-1 | NK2 homeobox 1 | 0.028 | |
Six3 | sine oculis-related homeobox 3 homolog (Drosophila) | 0.028 | |
T | brachyury | 0.028 | |
Hmx3 | H6 homeobox 3 | 0.027 | |
Prrx2 | paired related homeobox 2 | 0.027 | |
Gata4 | GATA binding protein 4 | 0.027 | |
Eya1 | eyes absent 1 homolog (Drosophila) | 0.027 | |
Lmx1a | LIM homeobox transcription factor 1 alpha | 0.026 | |
Dlx5 | distal-less homeobox 5 | 0.025 | |
Lhx3 | LIM homeobox protein 3 | 0.024 | |
Col22a1 | collagen, type XXII, alpha 1 | 0.024 | |
Igdcc3 | immunoglobulin superfamily, DCC subclass, member 3 | 0.023 | |
Six6 | sine oculis-related homeobox 6 homolog (Drosophila) | 0.022 | |
Lhx5 | LIM homeobox protein 5 | 0.021 | |
Zic2 | zinc finger protein of the cerebellum 2 | 0.021 | |
Hand1 | heart and neural crest derivatives expressed transcript 1 | 0.021 | |
Hoxb1 | homeobox B1 | 0.020 | |
Nr2e1 | nuclear receptor subfamily 2, group E, member 1 | 0.019 | |
Tlx3 | T-cell leukemia, homeobox 3 | 0.019 | |
Evx1 | even skipped homeotic gene 1 homolog | 0.019 | |
Pou4f3 | POU domain, class 4, transcription factor 3 | 0.019 | |
Dab1 | disabled homolog 1 (Drosophila) | 0.018 | |
Mecom | MDS1 and EVI1 complex locus | 0.018 | |
Nkx1-2 | NK1 transcription factor related, locus 2 (Drosophila) | 0.017 | |
Hoxa2 | homeobox A2 | 0.017 | |
Foxb1 | forkhead box B1 | 0.017 | |
Neurog3 | neurogenin 3 | 0.017 | |
Emid2 | EMI domain containing 2 | 0.017 | |
Gli2 | GLI-Kruppel family member GLI2 | 0.017 | |
Tcfap2b | transcription factor AP-2 beta | 0.017 | |
Ror2 | receptor tyrosine kinase-like orphan receptor 2 | 0.016 | |
Hoxa11 | homeobox A11 | 0.016 | |
Nkx6-1 | NK6 homeobox 1 | 0.016 | |
Arx | aristaless related homeobox | 0.016 | |
Bnc1 | basonuclin 1 | 0.016 | |
Foxa1 | forkhead box A1 | 0.015 | |
Phox2b | paired-like homeobox 2b | 0.015 | |
Tcf21 | transcription factor 21 | 0.015 | |
Nkx3-2 | NK3 homeobox 2 | 0.014 | |
Zic1 | zinc finger protein of the cerebellum 1 | 0.014 | |
Hoxd1 | homeobox D1 | 0.014 | |
Prph2 | peripherin 2 | 0.014 | |
Atoh1 | atonal homolog 1 (Drosophila) | 0.013 | |
Otx1 | orthodenticle homolog 1 (Drosophila) | 0.013 | |
Uncx | UNC homeobox | 0.013 | |
Nr5a1 | nuclear receptor subfamily 5, group A, member 1 | 0.013 | |
Nkx2-5 | NK2 transcription factor related, locus 5 (Drosophila) | 0.013 | |
Pou3f3 | POU domain, class 3, transcription factor 3 | 0.013 |