The network for 'rna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

rna metabolic process

The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.

Caenorhabditis elegans
Name Description Probability Func Analog Organism
egl-18 Protein EGL-18 0.996
lin-35 Protein LIN-35 0.976
pha-4 Protein PHA-4 0.974
mat-3 Protein MAT-3 0.966
hlh-2 Protein HLH-2 0.963
eya-1 Protein EYA-1 0.940
elt-6 Protein ELT-6 0.904
let-418 Protein LET-418 0.900
nhr-2 Protein NHR-2 0.899
attf-2 Protein ATTF-2 0.857
ceh-20 Protein CEH-20 0.853
hcp-3 Protein HCP-3 0.845
csn-5 Protein CSN-5 0.841
cfim-2 Protein CFIM-2 0.825
fib-1 Protein FIB-1 0.805
egl-13 Protein EGL-13 0.801
his-64 Protein HIS-64 0.771
F39B2.1 Protein F39B2.1 0.733
daf-14 Protein DAF-14 0.729
nhr-49 Protein NHR-49 0.729
vab-3 Protein VAB-3 0.713
lag-1 Protein LAG-1 0.686
K07C5.4 Protein K07C5.4 0.680
B0035.1 Protein B0035.1 0.664
cam-1 Protein CAM-1 0.641
smc-3 Protein SMC-3 0.638
rsp-1 Protein RSP-1 0.637
mep-1 Protein MEP-1 0.634
egl-46 Protein EGL-46 0.630
skp-1 Protein SKP-1 0.624
nol-5 Protein NOL-5 0.617
fkh-2 Protein FKH-2 0.605
wdr-46 Protein WDR-46 0.605
nhr-67 Protein NHR-67 0.601
emb-5 Protein EMB-5 0.601
zip-7 Protein ZIP-7 0.577
R11A8.7 Protein R11A8.7 0.573
htz-1 Protein HTZ-1 0.557
CELE_F32A7.4 Protein F32A7.4 0.555
rsr-2 Protein RSR-2 0.552
CELE_F25B4.5 Protein F25B4.5 0.550
mab-5 Protein MAB-5 0.545
mdf-2 Protein MDF-2 0.539
F09D1.1 Protein F09D1.1 0.536
his-1 Protein HIS-1 0.535
lst-3 Protein LST-3 0.534
C37H5.5 Protein C37H5.5 0.532
klp-16 Protein KLP-16 0.530
CELE_F10G7.9 Protein F10G7.9 0.526
CELE_Y41E3.11 Protein Y41E3.11 0.525
R05D11.4 Protein R05D11.4 0.521
kle-2 Protein KLE-2 0.521
rpl-3 Protein RPL-3 0.519
Y71G12B.8 Protein Y71G12B.8 0.519
his-61 Protein HIS-61 0.518
iff-1 Protein IFF-1 0.517
F08B4.7 Protein F08B4.7 0.515
miro-1 Protein MIRO-1 0.514
F33H1.4 Protein F33H1.4 0.512
lsm-7 Protein LSM-7 0.512
cacn-1 Protein CACN-1 0.511
klp-19 Protein KLP-19 0.510
unc-83 Protein UNC-83 0.506
tps-1 Protein TPS-1 0.504
rad-26 Protein RAD-26 0.503
lin-11 Protein LIN-11 0.501
CELE_T26G10.1 Protein T26G10.1 0.500
dsh-2 Protein DSH-2 0.496
utx-1 Protein UTX-1 0.490
T12E12.3 Protein T12E12.3 0.489
mag-1 Protein MAG-1 0.488
hif-1 Protein HIF-1 0.487
dnc-2 Protein DNC-2 0.477
unc-53 Protein UNC-53 0.476
zyg-1 Protein ZYG-1 0.474
lsy-2 Protein LSY-2 0.471
F58B3.4 Protein F58B3.4 0.468
CELE_F19F10.9 Protein F19F10.9 0.466
rsp-5 Protein RSP-5 0.466
pmk-1 Protein PMK-1 0.465
Y48G1A.4 Protein Y48G1A.4 0.465
C53H9.2 Protein C53H9.2 0.463
pop-1 Protein POP-1 0.462
rnp-6 Protein RNP-6 0.461
eftu-2 Protein EFTU-2 0.461
rpt-5 Protein RPT-5 0.460
inx-3 Protein INX-3 0.458
pabp-2 Protein PABP-2 0.457
T10B5.3 Protein T10B5.3 0.455
capg-1 Protein CAPG-1 0.454
CELE_T04A8.6 Protein T04A8.6 0.452
C34E10.8 Protein C34E10.8 0.451
T09B4.5 Protein T09B4.5 0.448
H06I04.3 Protein H06I04.3 0.448
CELE_Y57A10A.27 Protein Y57A10A.27 0.446
T28F4.1 Protein T28F4.1 0.445
B0412.3 Protein B0412.3 0.442
npp-7 Protein NPP-7 0.439
nud-1 Protein NUD-1 0.438
K04G7.1 Protein K04G7.1 0.437
Loading network...
Danio rerio
Name Description Probability Func Analog Organism
notch1a notch homolog 1a 0.998
gli1 GLI-Kruppel family member 1 0.998
tp53 tumor protein p53 0.982
otx1b orthodenticle homolog 1b 0.970
kdrl kinase insert domain receptor like 0.967
ndr2 nodal-related 2 0.966
hoxb1b homeo box B1b 0.963
myod1 myogenic differentiation 1 0.962
foxa2 forkhead box A2 0.936
fgf3 fibroblast growth factor 3 0.932
foxi1 forkhead box I1 0.931
chd chordin 0.930
gata3 GATA-binding protein 3 0.928
runx2b runt-related transcription factor 2b 0.927
mcm5 MCM5 minichromosome maintenance deficient 5 (S. cerevisiae) 0.926
flh floating head 0.908
diexf digestive organ expansion factor homolog 0.898
mafba v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) 0.896
pea3 ETS-domain transcription factor pea3 0.890
evx1 even-skipped homeobox 1 0.886
snrpd1 small nuclear ribonucleoprotein D1 polypeptide 0.880
pitx3 paired-like homeodomain transcription factor 3 0.873
boc brother of CDO 0.870
tal1 T-cell acute lymphocytic leukemia 1 0.867
smyhc1 slow myosin heavy chain 1 0.864
lhx1a LIM homeobox 1a 0.859
spaw southpaw 0.856
khdrbs1a KH domain containing, RNA binding, signal transduction associated 1a 0.847
raraa retinoic acid receptor, alpha a 0.841
hnf1ba HNF1 homeobox Ba 0.839
lef1 lymphocyte enhancer binding factor 1 0.838
gpc4 glypican 4 0.825
sox1a SRY-box containing gene 1a 0.818
tcea1 transcription elongation factor A (SII), 1 0.812
wdr36 WD repeat domain 36 0.808
sf3b1 splicing factor 3b, subunit 1 0.807
egr2b early growth response 2b 0.786
fzd7a frizzled homolog 7a 0.784
gata6 GATA-binding protein 6 0.783
msgn1 mesogenin 1 0.772
dlx3b distal-less homeobox gene 3b 0.755
eomesa eomesodermin homolog a 0.755
tbx1 T-box 1 0.750
mafl v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein L 0.748
nkx2.5 NK2 transcription factor related 5 0.735
tbx18 T-box 18 0.730
pax8 paired box gene 8 0.729
pcdh18b protocadherin 18b 0.727
pitx2 paired-like homeodomain transcription factor 2 0.727
tgfb3 transforming growth factor, beta 3 0.725
gbx2 gastrulation brain homeo box 2 0.723
hhip hedgehog interacting protein 0.714
dlx5a distal-less homeobox gene 5a 0.707
nova2 neuro-oncological ventral antigen 2 0.703
mef2a myocyte enhancer factor 2a 0.703
mef2d myocyte enhancer factor 2d 0.702
smad5 MAD homolog 5 (Drosophila) 0.696
irx7 iroquois homeobox protein 7 0.694
hoxa5a homeo box A5a 0.693
tll1 tolloid-like 1 0.690
wnt5b wingless-type MMTV integration site family, member 5b 0.688
pax6b paired box gene 6b 0.680
neurog1 neurogenin 1 0.678
pou3f1 POU class 3 homeobox 1 0.677
tfap2a transcription factor AP-2 alpha 0.676
irx4b iroquois homeobox protein 4b 0.669
spry4 sprouty (Drosophila) homolog 4 0.668
foxa3 forkhead box A3 0.663
klf4 Kruppel-like factor 4 0.657
lars leucyl-tRNA synthetase 0.656
sall1a sal-like 1a (Drosophila) 0.651
mab21l2 mab-21-like 2 0.651
fgfr3 fibroblast growth factor receptor 3 0.648
pbx4 pre-B-cell leukemia transcription factor 4 0.646
bmp2b bone morphogenetic protein 2b 0.637
sox32 SRY-box containing gene 32 0.630
twist1b twist1b 0.618
brd4 bromodomain containing 4 0.613
gata4 GATA-binding protein 4 0.612
sox7 SRY-box containing gene 7 0.610
fsta follistatin a 0.610
otx1a orthodenticle homolog 1a 0.609
six3b sine oculis homeobox homolog 3b 0.609
tardbp TAR DNA binding protein 0.607
prox1 prospero-related homeobox gene 1 0.607
ascl1a achaete-scute complex-like 1a (Drosophila) 0.604
dusp6 dual specificity phosphatase 6 0.599
tshb thyroid stimulating hormone, beta subunit 0.598
notch1b notch homolog 1b 0.595
gata2a GATA-binding protein 2a 0.594
nfe2l2 nuclear factor (erythroid-derived 2)-like 2 0.593
zfyve26 zinc finger, FYVE domain containing 26 0.592
foxd3 forkhead box D3 0.591
gata5 GATA-binding protein 5 0.587
hand2 heart and neural crest derivatives expressed transcript 2 0.586
tbx20 T-box 20 0.586
dlc deltaC 0.586
arx aristaless related homeobox 0.585
ef1a elongation factor 1-alpha 0.579
snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like 0.578
Loading network...
Drosophila melanogaster
Name Description Probability Func Analog Organism
Loading network...
Homo sapiens
Name Description Probability Func Analog Organism
Loading network...
Mus musculus
Name Description Probability Func Analog Organism
Loading network...
Rattus norvegicus
Name Description Probability Func Analog Organism
Junb jun B proto-oncogene 0.970
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.959
Btg2 BTG family, member 2 0.937
Fos FBJ osteosarcoma oncogene 0.917
Nr4a1 nuclear receptor subfamily 4, group A, member 1 0.906
Dusp1 dual specificity phosphatase 1 0.905
Egr1 early growth response 1 0.884
Jun Jun oncogene 0.841
Hnrpd heterogeneous nuclear ribonucleoprotein D 0.787
Zfp36 zinc finger protein 36 0.772
Ascl1 achaete-scute complex homolog 1 (Drosophila) 0.725
Dusp6 dual specificity phosphatase 6 0.711
Dlg4 discs, large homolog 4 (Drosophila) 0.689
Ier2 immediate early response 2 0.677
Psmb3 proteasome (prosome, macropain) subunit, beta type 3 0.669
Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 0.668
Nfya nuclear transcription factor-Y alpha 0.667
Cand1 cullin-associated and neddylation-dissociated 1 0.648
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.636
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.627
Ubtf upstream binding transcription factor, RNA polymerase I 0.627
Id1 inhibitor of DNA binding 1 0.623
Purb purine rich element binding protein B 0.602
Id3 inhibitor of DNA binding 3 0.582
Klf9 Kruppel-like factor 9 0.576
Stat6 signal transducer and activator of transcription 6 0.560
Grin2d glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.558
Robo1 roundabout homolog 1 (Drosophila) 0.555
Nup88 nucleoporin 88 0.545
Tcf12 transcription factor 12 0.530
Dbp D site of albumin promoter (albumin D-box) binding protein 0.526
Fgfr2 fibroblast growth factor receptor 2 0.525
Psmd2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.521
Nr4a2 nuclear receptor subfamily 4, group A, member 2 0.520
LOC684996 similar to chromosome 7 open reading frame 11 0.518
Musk muscle, skeletal, receptor tyrosine kinase 0.510
Hes1 hairy and enhancer of split 1 (Drosophila) 0.509
Sf1 splicing factor 1 0.502
Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a 0.496
Tcfe2a transcription factor E2a 0.490
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.488
Ppp1r12a protein phosphatase 1, regulatory (inhibitor) subunit 12A 0.484
Homer1 homer homolog 1 (Drosophila) 0.480
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.474
Dlg1 discs, large homolog 1 (Drosophila) 0.468
Casp2 caspase 2 0.467
Sf3a3 splicing factor 3a, subunit 3 0.465
Ptafr platelet-activating factor receptor 0.464
Gucy2d guanylate cyclase 2d 0.462
Camk2n2 calcium/calmodulin-dependent protein kinase II inhibitor 2 0.455
Dynll1 dynein light chain LC8-type 1 0.453
Taok1 TAO kinase 1 0.450
Jak2 Janus kinase 2 0.449
Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.448
Siah1a seven in absentia 1A 0.446
Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 0.446
Bmpr1a bone morphogenetic protein receptor, type IA 0.443
Tp53 tumor protein p53 0.438
Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 0.437
Ruvbl1 RuvB-like 1 (E. coli) 0.437
Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.436
Mmp14 matrix metallopeptidase 14 (membrane-inserted) 0.436
Prlh prolactin releasing hormone 0.434
Cebpb CCAAT/enhancer binding protein (C/EBP), beta 0.432
Sp1 Sp1 transcription factor 0.431
Cherp calcium homeostasis endoplasmic reticulum protein 0.429
Erbb4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 0.428
Tcf4 transcription factor 4 0.428
Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 0.427
Parp1 poly (ADP-ribose) polymerase 1 0.426
Pdyn prodynorphin 0.423
Gata6 GATA binding protein 6 0.422
Klf6 Kruppel-like factor 6 0.422
Notch1 Notch homolog 1, translocation-associated (Drosophila) 0.421
Tars threonyl-tRNA synthetase 0.420
Map3k1 mitogen activated protein kinase kinase kinase 1 0.420
Wbp11 WW domain binding protein 11 0.419
Bat3 HLA-B-associated transcript 3 0.418
Sfrs5 splicing factor, arginine/serine-rich 5 0.418
Acin1 apoptotic chromatin condensation inducer 1 0.415
Sycn syncollin 0.414
Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 0.412
Dkc1 dyskeratosis congenita 1, dyskerin 0.409
Hand2 heart and neural crest derivatives expressed 2 0.408
Zfp36l1 zinc finger protein 36, C3H type-like 1 0.406
S100a8 S100 calcium binding protein A8 0.406
Mef2d myocyte enhancer factor 2D 0.405
Ptov1 prostate tumor overexpressed 1 0.405
Ccnl1 cyclin L1 0.404
Nedd4 neural precursor cell expressed, developmentally down-regulated 4 0.400
Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 0.399
Mutyh mutY homolog (E. coli) 0.398
Nr4a3 nuclear receptor subfamily 4, group A, member 3 0.394
Sfrs2 splicing factor, arginine/serine-rich 2 0.391
Scaf1 SR-related CTD-associated factor 1 0.391
Thrap3 thyroid hormone receptor associated protein 3 0.387
Adra2b adrenergic, alpha-2B-, receptor 0.383
Sf3b1 splicing factor 3b, subunit 1 0.381
St18 suppression of tumorigenicity 18 0.378
Adora2a adenosine A2a receptor 0.374
Loading network...
Saccharomyces cerevisiae
Name Description Probability Func Analog Organism