The network for 'mitochondrial rna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

mitochondrial rna metabolic process

The chemical reactions and pathways involving RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
SUV3 Suv3p 0.922
IFM1 Ifm1p 0.571
MRS2 Mrs2p 0.559
OMS1 Oms1p 0.523
ISM1 Ism1p 0.379
MRM1 Mrm1p 0.289
MRH4 Mrh4p 0.289
PET309 Pet309p 0.284
MSE1 Mse1p 0.276
MSF1 Msf1p 0.242
AIM10 Aim10p 0.230
PET112 Pet112p 0.201
DSS1 Dss1p 0.201
CYM1 Cym1p 0.180
GYL1 Gyl1p 0.167
OCT1 Oct1p 0.137
NAM2 Nam2p 0.133
MSW1 Msw1p 0.133
MSR1 Msr1p 0.129
SLS1 Sls1p 0.128
MSY1 Msy1p 0.127
MSD1 Msd1p 0.126
NOP56 Nop56p 0.126
MTG2 Mtg2p 0.109
CTM1 Ctm1p 0.103
YNL022C hypothetical protein 0.098
MTF1 Mtf1p 0.098
RMD9 Rmd9p 0.089
YSC83 Ysc83p 0.086
YLL054C hypothetical protein 0.081
COQ1 Coq1p 0.079
QRI7 Qri7p 0.079
MEF1 Mef1p 0.077
NOP7 Nop7p 0.076
FMP25 Fmp25p 0.075
CKI1 Cki1p 0.071
CBP1 Cbp1p 0.068
SES1 Ses1p 0.067
MST1 Mst1p 0.062
AGC1 Agc1p 0.062
MSS116 Mss116p 0.060
MRF1 Mrf1p 0.060
SLM5 Slm5p 0.053
GLN4 Gln4p 0.050
VAS1 Vas1p 0.048
YFH7 Yfh7p 0.043
PUT4 Put4p 0.042
FMP30 Fmp30p 0.040
TSR1 Tsr1p 0.040
PAM1 Pam1p 0.039
AIM43 Aim43p 0.039
MER1 Mer1p 0.038
NOP2 Nop2p 0.038
NOP10 Nop10p 0.037
YPK3 Ypk3p 0.037
MSS2 Mss2p 0.036
BRX1 Brx1p 0.036
YOL038C-A hypothetical protein 0.035
YLR264C-A hypothetical protein 0.035
SRD1 Srd1p 0.034
CCM1 Ccm1p 0.033
SOV1 Sov1p 0.032
NSA1 Nsa1p 0.032
MSH1 Msh1p 0.032
YLR162W hypothetical protein 0.030
FMP48 Fmp48p 0.030
ARP10 Arp10p 0.030
KRS1 Krs1p 0.029
ARG8 Arg8p 0.029
ERT1 Ert1p 0.029
MSM1 Msm1p 0.029
LEU2 Leu2p 0.028
UTP4 Utp4p 0.028
SKS1 Sks1p 0.028
FAA2 Faa2p 0.027
YLR042C hypothetical protein 0.027
YJL107C hypothetical protein 0.027
KTR5 Ktr5p 0.026
YMR166C hypothetical protein 0.026
NOC2 Noc2p 0.026
BIO2 Bio2p 0.026
URA3 Ura3p 0.026
ESF1 Esf1p 0.026
YCL047C hypothetical protein 0.026
CUP1-1 Cup1-1p 0.025
YPL066W hypothetical protein 0.025
YIR014W hypothetical protein 0.025
DED81 Ded81p 0.025
HXT3 Hxt3p 0.025
TIM54 Tim54p 0.024
YIR035C hypothetical protein 0.024
VHS3 Vhs3p 0.024
SAL1 Sal1p 0.024
MPE1 Mpe1p 0.024
IME4 Ime4p 0.024
YAR068W hypothetical protein 0.023
ATP6 Atp6p 0.023
YJL181W hypothetical protein 0.023
YPR157W hypothetical protein 0.023
ABP140 Abp140p 0.023
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
CG17259 CG17259 gene product from transcript CG17259-RA 0.020
Aats-trp Tryptophanyl-tRNA synthetase 0.019
CG5924 CG5924 gene product from transcript CG5924-RA 0.019
Aats-met Methionyl-tRNA synthetase 0.019
JhI-1 Juvenile hormone-inducible protein 1 0.016
Aats-leu Leucyl-tRNA synthetase 0.016
Aats-pro Prolyl-tRNA synthetase 0.014
Aats-tyr Tyrosyl-tRNA synthetase 0.013
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Homo sapiens
Name Description Probability Func Analog Organism
YARS tyrosyl-tRNA synthetase 0.931
TFB1M transcription factor B1, mitochondrial 0.891
TFAM transcription factor A, mitochondrial 0.846
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.678
C7orf36 chromosome 7 open reading frame 36 0.539
MRPS26 mitochondrial ribosomal protein S26 0.520
IARS isoleucyl-tRNA synthetase 0.509
MRPS22 mitochondrial ribosomal protein S22 0.456
MRPL47 mitochondrial ribosomal protein L47 0.446
TFB2M transcription factor B2, mitochondrial 0.405
MRPL1 mitochondrial ribosomal protein L1 0.372
MARS methionyl-tRNA synthetase 0.340
RNMTL1 RNA methyltransferase like 1 0.321
AARS alanyl-tRNA synthetase 0.266
CARS cysteinyl-tRNA synthetase 0.258
EPRS glutamyl-prolyl-tRNA synthetase 0.235
LARS2 leucyl-tRNA synthetase 2, mitochondrial 0.194
MRPS35 mitochondrial ribosomal protein S35 0.181
MRPL32 mitochondrial ribosomal protein L32 0.165
FASTKD2 FAST kinase domains 2 0.153
PTCD3 Pentatricopeptide repeat domain 3 0.150
MRPL55 mitochondrial ribosomal protein L55 0.136
KLHL24 kelch-like 24 (Drosophila) 0.130
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 0.121
ICT1 immature colon carcinoma transcript 1 0.120
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 0.111
C15orf63 chromosome 15 open reading frame 63 0.098
TUFM Tu translation elongation factor, mitochondrial 0.091
C7orf30 chromosome 7 open reading frame 30 0.087
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial 0.084
MRRF mitochondrial ribosome recycling factor 0.075
SLC25A10 solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 0.073
TRUB2 TruB pseudouridine (psi) synthase homolog 2 (E. coli) 0.073
LRPPRC leucine-rich PPR-motif containing 0.068
MRPL23 mitochondrial ribosomal protein L23 0.066
HEATR1 HEAT repeat containing 1 0.066
AGK acylglycerol kinase 0.065
PUS1 pseudouridylate synthase 1 0.065
BOP1 block of proliferation 1 0.064
NOL11 nucleolar protein 11 0.062
MRPL12 mitochondrial ribosomal protein L12 0.062
ARMC6 armadillo repeat containing 6 0.062
MRPL39 mitochondrial ribosomal protein L39 0.060
MRPL10 mitochondrial ribosomal protein L10 0.057
MTPAP mitochondrial poly(A) polymerase 0.057
WDR12 WD repeat domain 12 0.057
PTRH2 peptidyl-tRNA hydrolase 2 0.052
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) 0.048
MRPL2 mitochondrial ribosomal protein L2 0.048
TARS threonyl-tRNA synthetase 0.047
NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 0.046
MRPS9 mitochondrial ribosomal protein S9 0.046
GCDH glutaryl-CoA dehydrogenase 0.043
BBX bobby sox homolog (Drosophila) 0.042
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 0.039
MRPS17 mitochondrial ribosomal protein S17 0.039
C10orf2 chromosome 10 open reading frame 2 0.039
PAK1IP1 PAK1 interacting protein 1 0.039
PYCR2 pyrroline-5-carboxylate reductase family, member 2 0.039
MRPS30 mitochondrial ribosomal protein S30 0.038
PDCD11 programmed cell death 11 0.038
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.038
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.037
THOP1 thimet oligopeptidase 1 0.036
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 0.036
ZNF195 zinc finger protein 195 0.034
NSUN4 NOP2/Sun domain family, member 4 0.034
MRPS27 mitochondrial ribosomal protein S27 0.034
RG9MTD1 RNA (guanine-9-) methyltransferase domain containing 1 0.033
SARS2 seryl-tRNA synthetase 2, mitochondrial 0.030
LONP1 lon peptidase 1, mitochondrial 0.030
C14orf104 chromosome 14 open reading frame 104 0.030
MRPS5 mitochondrial ribosomal protein S5 0.030
KIAA0664 KIAA0664 0.029
MRPL3 mitochondrial ribosomal protein L3 0.028
C8orf38 chromosome 8 open reading frame 38 0.028
CECR5 cat eye syndrome chromosome region, candidate 5 0.027
MRPL14 mitochondrial ribosomal protein L14 0.027
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 0.027
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.027
RPUSD3 RNA pseudouridylate synthase domain containing 3 0.026
WDR75 WD repeat domain 75 0.026
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 0.026
MRPS23 mitochondrial ribosomal protein S23 0.025
IPO4 importin 4 0.025
METTL18 methyltransferase like 18 0.025
MRPL27 mitochondrial ribosomal protein L27 0.025
NTHL1 nth endonuclease III-like 1 (E. coli) 0.025
NDUFAF4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 0.025
DUS4L dihydrouridine synthase 4-like (S. cerevisiae) 0.024
KIAA0391 KIAA0391 0.024
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast) 0.023
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1 0.023
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 0.023
FASTKD1 FAST kinase domains 1 0.023
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma 0.023
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 0.022
C1orf131 chromosome 1 open reading frame 131 0.022
MRPS2 mitochondrial ribosomal protein S2 0.022
POLDIP2 polymerase (DNA-directed), delta interacting protein 2 0.022
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Mus musculus
Name Description Probability Func Analog Organism
Ttn titin 0.016
Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 0.014
Agtr2 angiotensin II receptor, type 2 0.013
Ppargc1b peroxisome proliferative activated receptor, gamma, coactivator 1 beta 0.011
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Rattus norvegicus
Name Description Probability Func Analog Organism
Tmem69 transmembrane protein 69 0.368
Mrps30 mitochondrial ribosomal protein S30 0.174
Tfb2m transcription factor B2, mitochondrial 0.159
Fastkd2 FAST kinase domains 2 0.145
Mars methionine-tRNA synthetase 0.137
Ptcd3 Pentatricopeptide repeat domain 3 0.096
Aars alanyl-tRNA synthetase 0.070
Ndufaf4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 0.068
Mipep mitochondrial intermediate peptidase 0.067
Hibadh 3-hydroxyisobutyrate dehydrogenase 0.057
Pnpt1 polyribonucleotide nucleotidyltransferase 1 0.056
RGD1306595 similar to hypothetical protein 0.054
Mrps31 mitochondrial ribosomal protein S31 0.045
Trnt1 tRNA nucleotidyl transferase, CCA-adding, 1 0.042
Polr1b polymerase (RNA) I polypeptide B 0.041
Mrpl44 mitochondrial ribosomal protein L44 0.041
Aifm1 apoptosis-inducing factor, mitochondrion-associated 1 0.041
Adsl adenylosuccinate lyase 0.039
Fastkd3 FAST kinase domains 3 0.036
Prmt5 protein arginine methyltransferase 5 0.035
Bcs1l BCS1-like (yeast) 0.034
Afg3l2 AFG3(ATPase family gene 3)-like 2 (yeast) 0.033
Polr3d polymerase (RNA) III (DNA directed) polypeptide D 0.031
Mrps9 mitochondrial ribosomal protein S9 0.030
Tfam transcription factor A, mitochondrial 0.030
Pno1 partner of NOB1 homolog (S. cerevisiae) 0.030
Usp10 ubiquitin specific peptidase 10 0.029
Mmachc methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 0.029
Mmaa methylmalonic aciduria (cobalamin deficiency) cblA type 0.028
Elac2 elaC homolog 2 (E. coli) 0.028
Cpsf1 cleavage and polyadenylation specific factor 1 0.027
Fbxo22 F-box protein 22 0.027
Mtfmt mitochondrial methionyl-tRNA formyltransferase 0.025
Rpusd4 RNA pseudouridylate synthase domain containing 4 0.025
Map1d methionine aminopeptidase 1D 0.024
Sco1 SCO cytochrome oxidase deficient homolog 1 (yeast) 0.024
Ppp2r1a protein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform 0.023
Faf1 Fas (TNFRSF6) associated factor 1 0.023
Setd6 SET domain containing 6 0.022
Hrb2 HIV-1 Rev binding protein 2 0.022
RGD1359600 LEA_4 domain containing protein RGD1359600 0.021
Oxnad1 oxidoreductase NAD-binding domain containing 1 0.020
Cpt2 carnitine palmitoyltransferase 2 0.019
Ppm1g protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform 0.019
Dcaf13 DDB1 and CUL4 associated factor 13 0.018
Gfm1 G elongation factor, mitochondrial 1 0.018
Nsun2 NOL1/NOP2/Sun domain family, member 2 0.018
Stoml2 stomatin (Epb7.2)-like 2 0.018
Yars2 tyrosyl-tRNA synthetase 2 (mitochondrial) 0.017
Glud1 glutamate dehydrogenase 1 0.017
Smn1 survival motor neuron 1 0.017
Wdr46 WD repeat domain 46 0.017
Rrs1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 0.016
Zfp639 zinc finger protein 639 0.016
Acad10 acyl-Coenzyme A dehydrogenase family, member 10 0.016
Gcs1 glucosidase 1 0.016
Jmjd5 jumonji domain containing 5 0.016
Mrps18b mitochondrial ribosomal protein S18B 0.015
Mtpap mitochondrial poly(A) polymerase 0.015
Ttc27 tetratricopeptide repeat domain 27 0.015
Abce1 ATP-binding cassette, subfamily E (OABP), member 1 0.015
Decr1 2,4-dienoyl CoA reductase 1, mitochondrial 0.015
Wdfy1 WD repeat and FYVE domain containing 1 0.015
Psmd12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 0.014
Mak10 MAK10 homolog, amino-acid N-acetyltransferase subunit, (S. cerevisiae) 0.014
Ruvbl1 RuvB-like 1 (E. coli) 0.014
Cars cysteinyl-tRNA synthetase 0.014
Sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.014
Dph5 DPH5 homolog (S. cerevisiae) 0.014
Pank1 pantothenate kinase 1 0.014
Vars2 valyl-tRNA synthetase 2, mitochondrial (putative) 0.014
Eif3c eukaryotic translation initiation factor 3, subunit C 0.014
Mlh1 mutL homolog 1 (E. coli) 0.014
Pitrm1 pitrilysin metallopeptidase 1 0.014
Atad3a ATPase family, AAA domain containing 3A 0.014
Ccdc51 coiled-coil domain containing 51 0.014
Coq2 coenzyme Q2 homolog, prenyltransferase (yeast) 0.013
Ltv1 LTV1 homolog (S. cerevisiae) 0.013
Peo1 progressive external ophthalmoplegia 1 0.013
Cox15 COX15 homolog, cytochrome c oxidase assembly protein (yeast) 0.013
Zscan12 zinc finger and SCAN domain containing 12 0.013
Pdss2 prenyl (decaprenyl) diphosphate synthase, subunit 2 0.013
Eprs glutamyl-prolyl-tRNA synthetase 0.012
Coasy Coenzyme A synthase 0.012
Mettl7a methyltransferase like 7A 0.012
Aatf apoptosis antagonizing transcription factor 0.012
Fam96a family with sequence similarity 96, member A 0.012
Polr2b polymerase (RNA) II (DNA directed) polypeptide B 0.012
Phospho2 phosphatase, orphan 2 0.012
Coq3 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) 0.012
Gtpbp3 GTP binding protein 3 0.012
Gcdh glutaryl-Coenzyme A dehydrogenase 0.012
Mrpl38 mitochondrial ribosomal protein L38 0.012
RGD1304567 similar to RIKEN cDNA A430005L14 0.012
RGD1359460 MMR_HSR1 domain containing protein RGD1359460 0.012
Ddx1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 0.012
Top1mt topoisomerase (DNA) I, mitochondrial 0.012
Hars2l histidyl-tRNA synthetase 2-like 0.012
Kin antigenic determinant of rec-A protein homolog (mouse) 0.011
Gorasp2 golgi reassembly stacking protein 2 0.011