IMP

Process View

Saccharomyces cerevisiae

18 genes annotated in yeast

nuclear polyadenylation dependent rrna catabolic process

The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "nuclear polyadenylation dependent rrna catabolic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "nuclear polyadenylation dependent rrna catabolic process" (in gray)

Name	Description	Probability
CSL4	Csl4p	1.000
RRP45	Rrp45p	1.000
RRP46	Rrp46p	0.999
RRP6	Rrp6p	0.998
MPP6	Mpp6p	0.998
SKI6	Ski6p	0.996
RRP43	Rrp43p	0.991
RRP40	Rrp40p	0.987
DIS3	Dis3p	0.974
MTR3	Mtr3p	0.911
RRP4	Rrp4p	0.884
RRP42	Rrp42p	0.864
LRP1	Lrp1p	0.736
AIR1	Air1p	0.704
RAT1	Rat1p	0.392
AIR2	Air2p	0.261
SKI7	Ski7p	0.204
PAP2	Pap2p	0.203
MTR4	Mtr4p	0.159
THG1	Thg1p	0.119
NRD1	Nrd1p	0.101
NOP53	Nop53p	0.069
YIR035C	hypothetical protein	0.068
SKI3	Ski3p	0.067
RPF1	Rpf1p	0.059
ARG8	Arg8p	0.053
SRD1	Srd1p	0.049
PRS2	Prs2p	0.047
YLR264C-A	hypothetical protein	0.039
RKM3	Rkm3p	0.038
URA3	Ura3p	0.038
LEU2	Leu2p	0.038
REV1	Rev1p	0.034
YAR068W	hypothetical protein	0.034
YLR162W	hypothetical protein	0.034
GBP2	Gbp2p	0.034
MER1	Mer1p	0.034
HO	Hop	0.031
YOL038C-A	hypothetical protein	0.030
ARP10	Arp10p	0.029
GLE2	Gle2p	0.029
RRN3	Rrn3p	0.028
NUP49	Nup49p	0.026
ATP6	Atp6p	0.024
YPR157W	hypothetical protein	0.024
YLR042C	hypothetical protein	0.024
HXT3	Hxt3p	0.023
UTP20	Utp20p	0.023
RRP15	Rrp15p	0.022
YAR066W	hypothetical protein	0.021
CUP1-1	Cup1-1p	0.021
SPL2	Spl2p	0.021
SWT1	Swt1p	0.021
AUA1	Aua1p	0.020
YBL055C	hypothetical protein	0.019
IZH4	Izh4p	0.018
ZPS1	Zps1p	0.018
BSC1	Bsc1p	0.017
HPF1	Hpf1p	0.017
YOL013W-A	hypothetical protein	0.017
TRF5	Trf5p	0.017
POP6	Pop6p	0.016
YLR040C	hypothetical protein	0.015
YOL014W	hypothetical protein	0.015
YBR013C	hypothetical protein	0.015
FMT1	Fmt1p	0.015
MF(ALPHA)2	Mf(alpha)2p	0.014
MF(ALPHA)1	Mf(alpha)1p	0.014
RPO31	Rpo31p	0.014
CPD1	Cpd1p	0.013
DAS2	Das2p	0.013
SCM4	Scm4p	0.013
YPR096C	hypothetical protein	0.013
YCR102C	hypothetical protein	0.013
ADH2	Adh2p	0.013
RIO1	Rio1p	0.013
YAL037C-A	hypothetical protein	0.013
COS12	Cos12p	0.013
YAL064W	hypothetical protein	0.012
MRD1	Mrd1p	0.012
TAD2	Tad2p	0.012
RNP1	Rnp1p	0.012
RNH70	Rnh70p	0.012
INM1	Inm1p	0.012
PTR2	Ptr2p	0.012
TIR3	Tir3p	0.012
DIC1	Dic1p	0.012
PTI1	Pti1p	0.012
YIL151C	hypothetical protein	0.012
OPT2	Opt2p	0.011
SWC7	Swc7p	0.011
FCY21	Fcy21p	0.011
YPL067C	hypothetical protein	0.011
MFA2	Mfa2p	0.011
NRG2	Nrg2p	0.011
RSN1	Rsn1p	0.011
TYE7	Tye7p	0.011
SPS4	Sps4p	0.011
ALT2	Alt2p	0.011
BCD1	Bcd1p	0.011
TSC3	Tsc3p	0.011
YAR1	Yar1p	0.011
YGR035C	hypothetical protein	0.011
SRP68	Srp68p	0.011
RRT5	Rrt5p	0.011
YGL006W-A	hypothetical protein	0.011
UPS3	Ups3p	0.011
PHO11	Pho11p	0.010
UBP1	Ubp1p	0.010
PRP28	Prp28p	0.010
YDR222W	hypothetical protein	0.010