The network for 'maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna ' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
KRR1 Krr1p 1.000
NOP1 Nop1p 0.999
ENP1 Enp1p 0.999
NOP14 Nop14p 0.999
BFR2 Bfr2p 0.998
PWP2 Pwp2p 0.998
FAF1 Faf1p 0.998
KRE33 Kre33p 0.994
MPP10 Mpp10p 0.993
NOP56 Nop56p 0.992
UTP10 Utp10p 0.991
NOC4 Noc4p 0.988
RIO2 Rio2p 0.988
UTP4 Utp4p 0.987
UTP22 Utp22p 0.986
RPS14A Rps14ap 0.983
DIP2 Dip2p 0.983
BMS1 Bms1p 0.982
SLX9 Slx9p 0.981
ENP2 Enp2p 0.981
MRD1 Mrd1p 0.975
UTP11 Utp11p 0.973
UTP18 Utp18p 0.966
RPS9B Rps9bp 0.961
UTP7 Utp7p 0.957
SOF1 Sof1p 0.953
UTP6 Utp6p 0.951
UTP9 Utp9p 0.948
UTP25 Utp25p 0.948
RRP9 Rrp9p 0.948
NOP58 Nop58p 0.943
UTP8 Utp8p 0.942
TSR1 Tsr1p 0.938
RPS7A Rps7ap 0.933
ECM16 Ecm16p 0.917
IMP3 Imp3p 0.912
RPS5 Rps5p 0.910
RPS4A Rps4ap 0.907
NOB1 Nob1p 0.903
PXR1 Pxr1p 0.901
KRI1 Kri1p 0.895
EMG1 Emg1p 0.885
UTP13 Utp13p 0.884
RPS18A Rps18ap 0.881
RRP36 Rrp36p 0.874
BUD21 Bud21p 0.864
SAS10 Sas10p 0.861
ESF1 Esf1p 0.855
UTP15 Utp15p 0.843
RPS18B Rps18bp 0.835
ESF2 Esf2p 0.825
RPS0A Rps0ap 0.818
RPS11B Rps11bp 0.815
NAN1 Nan1p 0.808
UTP21 Utp21p 0.798
RRP12 Rrp12p 0.775
PNO1 Pno1p 0.770
UTP20 Utp20p 0.762
UTP23 Utp23p 0.755
RPS10B Rps10bp 0.753
RPS1B Rps1bp 0.744
NOP6 Nop6p 0.719
CMS1 Cms1p 0.718
RPS3 Rps3p 0.712
CDC33 Cdc33p 0.710
RRP5 Rrp5p 0.703
RIO1 Rio1p 0.636
RRP7 Rrp7p 0.636
UTP30 Utp30p 0.631
RPS17A Rps17ap 0.623
RPS17B Rps17bp 0.616
RRP14 Rrp14p 0.610
IMP4 Imp4p 0.603
ROK1 Rok1p 0.588
RPL12A Rpl12ap 0.579
DBP8 Dbp8p 0.576
RCL1 Rcl1p 0.559
GAR1 Gar1p 0.548
LCP5 Lcp5p 0.538
SUI1 Sui1p 0.526
RPS13 Rps13p 0.525
RPS24B Rps24bp 0.525
RPS11A Rps11ap 0.512
PRP43 Prp43p 0.502
ASC1 Asc1p 0.501
DIM1 Dim1p 0.476
LTV1 Ltv1p 0.460
RPS24A Rps24ap 0.438
EBP2 Ebp2p 0.432
BCD1 Bcd1p 0.417
PRS3 Prs3p 0.396
NOP8 Nop8p 0.393
RPS6B Rps6bp 0.354
UTP14 Utp14p 0.341
LRP1 Lrp1p 0.340
NOP12 Nop12p 0.299
TRM112 Trm112p 0.290
RPS9A Rps9ap 0.287
FCF1 Fcf1p 0.286
RPS4B Rps4bp 0.283
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
bop1 block of proliferation 1 0.823
wdr46 WD repeat domain 46 0.701
utp15 utp15, U3 small nucleolar ribonucleoprotein, homolog 0.655
rps15a ribosomal protein S15a 0.650
rrp1 ribosomal RNA processing 1 homolog (S. cerevisiae) 0.568
nop14 NOP14 nucleolar protein homolog (yeast) 0.565
rps3a ribosomal protein S3A 0.531
ddx18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.511
diexf digestive organ expansion factor homolog 0.500
rps5 ribosomal protein S5 0.499
polr1a polymerase (RNA) I polypeptide A 0.473
rps11 ribosomal protein S11 0.468
im:7148292 im:7148292 0.464
gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 0.454
rpl13 ribosomal protein L13 0.440
mib mind bomb 0.423
eif3m eukaryotic translation initiation factor 3, subunit M 0.415
noc3l nucleolar complex associated 3 homolog (S. cerevisiae) 0.411
rpl7 ribosomal protein L7 0.393
rps29 ribosomal protein S29 0.389
rps15 ribosomal protein S15 0.388
tbl3 transducin (beta)-like 3 0.380
pes pescadillo 0.376
nsun5 NOP2/Sun domain family, member 5 0.375
rps8a ribosomal protein S8a 0.369
rpl10a ribosomal protein L10a 0.368
med12 mediator of RNA polymerase II transcription, subunit 12 homolog 0.364
wdr75 WD repeat domain 75 0.353
ddx27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 0.350
zgc:109888 zgc:109888 0.334
rpl11 ribosomal protein L11 0.331
surf6 surfeit 6 0.318
rpl36a ribosomal protein L36A 0.314
rpl30 ribosomal protein L30 0.313
rps12 ribosomal protein S12 0.309
rps3 ribosomal protein S3 0.305
rps10 ribosomal protein S10 0.298
zgc:92872 zgc:92872 0.297
bysl bystin-like 0.288
nop58 NOP58 ribonucleoprotein homolog (yeast) 0.271
rps7 ribosomal protein S7 0.268
umps uridine monophosphate synthetase 0.266
etf1 eukaryotic translation termination factor 1 0.260
rpl5b ribosomal protein L5b 0.251
rps18 ribosomal protein S18 0.249
rpsa ribosomal protein SA 0.243
ruvbl2 RuvB-like 2 (E. coli) 0.217
rpl5a ribosomal protein L5a 0.211
zgc:110084 zgc:110084 0.210
mki67ip mki67 (FHA domain) interacting nucleolar phosphoprotein (human) 0.201
nola1 nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) 0.190
si:dkey-91i17.1 si:dkey-91i17.1 0.185
polr1e polymerase (RNA) I polypeptide E 0.178
eif3g eukaryotic translation initiation factor 3, subunit G 0.178
tsr1 TSR1, 20S rRNA accumulation, homolog (yeast) 0.177
prmt7 protein arginine N-methyltransferase 7 0.176
zgc:123327 zgc:123327 0.176
wdr36 WD repeat domain 36 0.173
pprc1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 0.151
tp53 tumor protein p53 0.151
polr1b polymerase (RNA) I polypeptide B 0.150
rps25 ribosomal protein S25 0.141
eif3s2 eukaryotic translation initiation factor 3, subunit 2 beta 0.140
noc4l nucleolar complex associated 4 homolog (S. cerevisiae) 0.139
eif3d eukaryotic translation initiation factor 3, subunit D 0.139
tsr2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) 0.138
faua Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a 0.133
rrp15 ribosomal RNA processing 15 homolog (S. cerevisiae) 0.132
fbl fibrillarin 0.129
nip7 nuclear import 7 homolog (S. cerevisiae) 0.126
utp6 UTP6, small subunit (SSU) processome component, homolog (yeast) 0.124
prp19 PRP19/PSO4 homolog (S. cerevisiae) 0.120
rsl24d1 ribosomal L24 domain containing 1 0.115
zgc:56683 zgc:56683 0.114
rplp0 ribosomal protein, large, P0 0.114
riok2 RIO kinase 2 (yeast) 0.111
rps26 ribosomal protein S26 0.111
dohh deoxyhypusine hydroxylase/monooxygenase 0.107
rpl36 ribosomal protein L36 0.104
rpl10 ribosomal protein L10 0.103
nhp2 NHP2 ribonucleoprotein homolog (yeast) 0.103
rpl35 ribosomal protein L35 0.102
dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 0.100
rpl12 ribosomal protein L12 0.100
rpl26 ribosomal protein L26 0.100
rpl7a ribosomal protein L7a 0.098
rps21 ribosomal protein S21 0.096
akap1b A kinase (PRKA) anchor protein 1b 0.094
cct6a chaperonin containing TCP1, subunit 6A (zeta 1) 0.092
eef1g eukaryotic translation elongation factor 1 gamma 0.092
rps4x ribosomal protein S4, X-linked 0.091
rcl1 RNA terminal phosphate cyclase-like 1 0.086
rpl27 ribosomal protein L27 0.084
utp11l UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) 0.082
wdr12 WD repeat domain 12 0.082
btf3 basic transcription factor 3 0.081
ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b 0.079
pa2g4a proliferation-associated 2G4, a 0.079
eif3s6ip eukaryotic translation initiation factor 3, subunit 6 interacting protein 0.078
apc adenomatosis polyposis coli 0.076
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Drosophila melanogaster
Name Description Probability Func Analog Organism
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Homo sapiens
Name Description Probability Func Analog Organism
RPS14 ribosomal protein S14 0.986
RPS4X ribosomal protein S4, X-linked 0.983
RPS3 ribosomal protein S3 0.961
RPS16 ribosomal protein S16 0.906
FTSJ3 FtsJ homolog 3 (E. coli) 0.833
DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 0.806
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.794
MAK16 MAK16 homolog (S. cerevisiae) 0.783
RPS11 ribosomal protein S11 0.691
MKI67IP MKI67 (FHA domain) interacting nucleolar phosphoprotein 0.687
C10orf2 chromosome 10 open reading frame 2 0.685
RPL37A ribosomal protein L37a 0.682
POLR1C polymerase (RNA) I polypeptide C, 30kDa 0.609
WDR3 WD repeat domain 3 0.600
RPS3A ribosomal protein S3A 0.562
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 0.557
RPS18 ribosomal protein S18 0.530
HEATR1 HEAT repeat containing 1 0.491
RPS15A ribosomal protein S15a 0.481
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta 0.455
RPS25 ribosomal protein S25 0.450
WDR74 WD repeat domain 74 0.445
RPS5 ribosomal protein S5 0.443
HSPH1 heat shock 105kDa/110kDa protein 1 0.438
RPS28 ribosomal protein S28 0.431
WDR43 WD repeat domain 43 0.428
RPS12 ribosomal protein S12 0.426
BYSL bystin-like 0.419
RPS15 ribosomal protein S15 0.415
TRMT1 TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) 0.407
EIF5B eukaryotic translation initiation factor 5B 0.393
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 0.389
NSUN2 NOP2/Sun domain family, member 2 0.378
RPS13 ribosomal protein S13 0.370
RPS10 ribosomal protein S10 0.364
RPS8 ribosomal protein S8 0.362
RPL9 ribosomal protein L9 0.352
RPS6 ribosomal protein S6 0.345
RPS29 ribosomal protein S29 0.323
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 0.297
RPS17 ribosomal protein S17 0.281
TGS1 trimethylguanosine synthase 1 0.281
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) 0.276
EIF3B eukaryotic translation initiation factor 3, subunit B 0.256
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) 0.246
CCDC86 coiled-coil domain containing 86 0.228
RPS2 ribosomal protein S2 0.219
RPS24 ribosomal protein S24 0.209
RPF2 ribosome production factor 2 homolog (S. cerevisiae) 0.205
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) 0.205
RPS23 ribosomal protein S23 0.204
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) 0.192
NOL11 nucleolar protein 11 0.186
RPL27A ribosomal protein L27a 0.182
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 0.177
RPL27 ribosomal protein L27 0.177
RPSA ribosomal protein SA 0.174
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 0.173
NOP14 NOP14 nucleolar protein homolog (yeast) 0.171
RIOK1 RIO kinase 1 (yeast) 0.171
RPLP2 ribosomal protein, large, P2 0.170
DPH2 DPH2 homolog (S. cerevisiae) 0.168
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.167
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 0.159
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 0.159
NAT10 N-acetyltransferase 10 (GCN5-related) 0.157
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae) 0.155
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) 0.153
EIF3D eukaryotic translation initiation factor 3, subunit D 0.148
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 0.147
WDR75 WD repeat domain 75 0.147
RPL18 ribosomal protein L18 0.140
PPAN peter pan homolog (Drosophila) 0.137
NOP2 NOP2 nucleolar protein homolog (yeast) 0.135
RPS27 ribosomal protein S27 0.134
IPO4 importin 4 0.128
PUS7 pseudouridylate synthase 7 homolog (S. cerevisiae) 0.124
BMS1 BMS1 homolog, ribosome assembly protein (yeast) 0.123
BOP1 block of proliferation 1 0.120
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 0.116
RPL21 ribosomal protein L21 0.115
NOC4L nucleolar complex associated 4 homolog (S. cerevisiae) 0.113
PDCD11 programmed cell death 11 0.113
WDR46 WD repeat domain 46 0.112
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 0.105
RPS20 ribosomal protein S20 0.100
RPP40 ribonuclease P/MRP 40kDa subunit 0.098
PTRH2 peptidyl-tRNA hydrolase 2 0.097
RPLP1 ribosomal protein, large, P1 0.094
KIAA0020 KIAA0020 0.092
GTPBP4 GTP binding protein 4 0.091
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 0.090
RPS21 ribosomal protein S21 0.090
U2SURP U2 snRNP-associated SURP domain containing 0.089
SHQ1 SHQ1 homolog (S. cerevisiae) 0.088
PITPNB phosphatidylinositol transfer protein, beta 0.086
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.084
DIEXF digestive organ expansion factor homolog (zebrafish) 0.083
PUS1 pseudouridylate synthase 1 0.082
WDR12 WD repeat domain 12 0.081
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Mus musculus
Name Description Probability Func Analog Organism
Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 0.428
Rrp1b ribosomal RNA processing 1 homolog B (S. cerevisiae) 0.177
Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 0.157
Tsr1 TSR1, 20S rRNA accumulation, homolog (yeast) 0.143
Cebpz CCAAT/enhancer binding protein zeta 0.138
Nop2 NOP2 nucleolar protein homolog (yeast) 0.096
Eed embryonic ectoderm development 0.095
Fam203a family with sequence similarity 203, member A 0.067
Mybbp1a MYB binding protein (P160) 1a 0.060
Dnttip2 deoxynucleotidyltransferase, terminal, interacting protein 2 0.056
Cirh1a cirrhosis, autosomal recessive 1A (human) 0.056
Mki67ip Mki67 (FHA domain) interacting nucleolar phosphoprotein 0.054
Wdr74 WD repeat domain 74 0.053
Grwd1 glutamate-rich WD repeat containing 1 0.048
Rpl26 ribosomal protein L26 0.047
Abt1 activator of basal transcription 1 0.045
Gltscr2 glioma tumor suppressor candidate region gene 2 0.044
Ddx10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 0.041
Utp20 UTP20, small subunit (SSU) processome component, homolog (yeast) 0.040
Mak16 MAK16 homolog (S. cerevisiae) 0.040
Rpl36a ribosomal protein L36A 0.038
Pwp1 PWP1 homolog (S. cerevisiae) 0.037
Polr1a polymerase (RNA) I polypeptide A 0.036
Etf1 eukaryotic translation termination factor 1 0.036
Rrp15 ribosomal RNA processing 15 homolog (S. cerevisiae) 0.035
Rpl14 ribosomal protein L14 0.034
Spata5 spermatogenesis associated 5 0.034
Ddx20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 0.032
Nufip1 nuclear fragile X mental retardation protein interacting protein 1 0.029
Dis3 DIS3 mitotic control homolog (S. cerevisiae) 0.029
Eif2s2 eukaryotic translation initiation factor 2, subunit 2 (beta) 0.028
Ltv1 LTV1 homolog (S. cerevisiae) 0.028
Ccdc86 coiled-coil domain containing 86 0.028
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.027
Nubp2 nucleotide binding protein 2 0.027
Noc4l nucleolar complex associated 4 homolog (S. cerevisiae) 0.026
Igh immunoglobulin heavy chain complex 0.026
Naa15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 0.026
Rrp12 ribosomal RNA processing 12 homolog (S. cerevisiae) 0.024
Wdr75 WD repeat domain 75 0.024
Pdcd11 programmed cell death 11 0.023
Rrp8 ribosomal RNA processing 8, methyltransferase, homolog (yeast) 0.023
Pwp2 PWP2 periodic tryptophan protein homolog (yeast) 0.023
Tex10 testis expressed gene 10 0.023
Ppan peter pan homolog (Drosophila) 0.022
Exosc10 exosome component 10 0.022
Rpl22 ribosomal protein L22 0.022
Ppp2r2a protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform 0.022
Polr1b polymerase (RNA) I polypeptide B 0.022
Rpsa ribosomal protein SA 0.021
Orc2 origin recognition complex, subunit 2 0.021
Brix1 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 0.020
Sdad1 SDA1 domain containing 1 0.020
Gnl2 guanine nucleotide binding protein-like 2 (nucleolar) 0.020
Rrp9 RRP9, small subunit (SSU) processome component, homolog (yeast) 0.020
Twistnb TWIST neighbor 0.020
Rps25 ribosomal protein S25 0.019
2610027L16Rik RIKEN cDNA 2610027L16 gene 0.019
Tbrg4 transforming growth factor beta regulated gene 4 0.019
Noc3l nucleolar complex associated 3 homolog (S. cerevisiae) 0.019
Gtpbp4 GTP binding protein 4 0.019
Nop14 NOP14 nucleolar protein homolog (yeast) 0.018
Rpl23 ribosomal protein L23 0.017
Smyd5 SET and MYND domain containing 5 0.017
Fbl fibrillarin 0.017
Pus7l pseudouridylate synthase 7 homolog (S. cerevisiae)-like 0.016
Rpl27a ribosomal protein L27A 0.016
Nip7 nuclear import 7 homolog (S. cerevisiae) 0.016
Eif1a eukaryotic translation initiation factor 1A 0.016
Pprc1 peroxisome proliferative activated receptor, gamma, coactivator-related 1 0.016
Wdr46 WD repeat domain 46 0.016
Wdr43 WD repeat domain 43 0.015
Wdr5 WD repeat domain 5 0.015
Dph2 DPH2 homolog (S. cerevisiae) 0.015
Ngdn neuroguidin, EIF4E binding protein 0.015
Rpl13a ribosomal protein L13A 0.014
Rpl21 ribosomal protein L21 0.014
Wdr36 WD repeat domain 36 0.014
Ddx18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.014
Elac2 elaC homolog 2 (E. coli) 0.014
Rpl41 ribosomal protein L41 0.014
Smn1 survival motor neuron 1 0.014
Rpl11 ribosomal protein L11 0.014
Utp18 UTP18, small subunit (SSU) processome component, homolog (yeast) 0.013
Xpo5 exportin 5 0.013
Nol8 nucleolar protein 8 0.013
Rpl37a ribosomal protein L37a 0.013
D19Bwg1357e DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed 0.013
Tcerg1 transcription elongation regulator 1 (CA150) 0.013
Myc myelocytomatosis oncogene 0.013
Wdr55 WD repeat domain 55 0.013
Polr2b polymerase (RNA) II (DNA directed) polypeptide B 0.013
Rrs1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 0.013
Rpl3 ribosomal protein L3 0.013
Srsf7 serine/arginine-rich splicing factor 7 0.012
Nolc1 nucleolar and coiled-body phosphoprotein 1 0.012
Ctdp1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 0.012
Msh6 mutS homolog 6 (E. coli) 0.012
Kti12 KTI12 homolog, chromatin associated (S. cerevisiae) 0.012
Ccar1 cell division cycle and apoptosis regulator 1 0.012
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Rattus norvegicus
Name Description Probability Func Analog Organism