IMP

Process View

Rattus norvegicus

21 genes annotated in rat

diencephalon development

The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "diencephalon development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "diencephalon development" (in gray)

Name	Description	Probability	Func Analog Organism
Nr4a3	nuclear receptor subfamily 4, group A, member 3	0.165
Chrna7	cholinergic receptor, nicotinic, alpha 7	0.091
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.082	Mouse
Aqp4	aquaporin 4	0.067
Pax8	paired box 8	0.051
Bcl2	B-cell CLL/lymphoma 2	0.051
Trhr	thyrotropin releasing hormone receptor	0.046
Ncan	neurocan	0.042
Tbx2	T-box 2	0.040
Cyp21a1	cytochrome P450, family 21, subfamily a, polypeptide 1	0.039
Lepr	leptin receptor	0.039
Slc10a2	solute carrier family 10 (sodium/bile acid cotransporter family), member 2	0.037
Il9r	interleukin 9 receptor	0.037
Chrnb2	cholinergic receptor, nicotinic, beta 2 (neuronal)	0.034
Drd2	dopamine receptor D2	0.034	Mouse
Fgfr2	fibroblast growth factor receptor 2	0.034
Mmp16	matrix metallopeptidase 16	0.034
Gabrb3	gamma-aminobutyric acid (GABA) A receptor, beta 3	0.033
Pdyn	prodynorphin	0.033
Gja6	gap junction protein, alpha 6	0.033
Hoxa1	homeo box A1	0.032
Grm7	glutamate receptor, metabotropic 7	0.031
Cckar	cholecystokinin A receptor	0.029
Kcnj6	potassium inwardly-rectifying channel, subfamily J, member 6	0.028
Gja3	gap junction protein, alpha 3	0.028
Galr3	galanin receptor 3	0.027
Zfp382	zinc finger protein 382	0.027
Mylk2	myosin light chain kinase 2	0.027
Fam65a	family with sequence similarity 65, member A	0.026
Trim17	tripartite motif-containing 17	0.026
Ucn	urocortin	0.026	Rat
Ntrk1	neurotrophic tyrosine kinase, receptor, type 1	0.025
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1	0.025
Nfib	nuclear factor I/B	0.025
Gcnt3	glucosaminyl (N-acetyl) transferase 3, mucin type	0.025
Adrb1	adrenergic, beta-1-, receptor	0.025
Hes5	hairy and enhancer of split 5 (Drosophila)	0.024
Nrxn3	neurexin 3	0.024
Slc22a7	solute carrier family 22 (organic anion transporter), member 7	0.024
Hlf	hepatic leukemia factor	0.024
P2rx2	purinergic receptor P2X, ligand-gated ion channel, 2	0.023
Grin1	glutamate receptor, ionotropic, N-methyl D-aspartate 1	0.023
Calcrl	calcitonin receptor-like	0.023	Rat
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.023
Sdc3	syndecan 3	0.023
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.022	Zebrafish
Robo1	roundabout homolog 1 (Drosophila)	0.021
Prlhr	prolactin releasing hormone receptor	0.021
Hand2	heart and neural crest derivatives expressed 2	0.021
Lama5	laminin, alpha 5	0.021
Unc5b	unc-5 homolog B (C. elegans)	0.021
Cyss	cystatin S	0.021
Th	tyrosine hydroxylase	0.021
Zp1	zona pellucida glycoprotein 1 (sperm receptor)	0.020
Ahr	aryl hydrocarbon receptor	0.020
Tcf4	transcription factor 4	0.020
Nrg1	neuregulin 1	0.020
Cga	glycoprotein hormones, alpha polypeptide	0.020
Epor	erythropoietin receptor	0.020
Syt8	synaptotagmin VIII	0.020
Mc5r	melanocortin 5 receptor	0.020
Foxs1	forkhead box S1	0.020
Mr1	major histocompatibility complex, class I-related	0.019
Slc1a2	solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.019
Igf2	insulin-like growth factor 2	0.019
Nos1	nitric oxide synthase 1, neuronal	0.019
Kdr	kinase insert domain receptor	0.019
Grik1	glutamate receptor, ionotropic, kainate 1	0.018
Mapk4	mitogen-activated protein kinase 4	0.018
Vip	vasoactive intestinal peptide	0.018
Gipr	gastric inhibitory polypeptide receptor	0.018	Rat
Gpr176	G protein-coupled receptor 176	0.018
Ednra	endothelin receptor type A	0.018
Gria4	glutamate receptor, ionotrophic, AMPA 4	0.018
Il8ra	interleukin 8 receptor, alpha	0.018
Ngfr	nerve growth factor receptor (TNFR superfamily, member 16)	0.018
Cxcl2	chemokine (C-X-C motif) ligand 2	0.017
Myl7	myosin, light chain 7, regulatory	0.017
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.017
Htr5b	5-hydroxytryptamine (serotonin) receptor 5B	0.017
Sstr5	somatostatin receptor 5	0.017
Pacs1	phosphofurin acidic cluster sorting protein 1	0.017
Tcof1	Treacher Collins-Franceschetti syndrome 1 homolog (human)	0.017
Megf6	multiple EGF-like-domains 6	0.017
Hoxd3	homeo box D3	0.017
Olr1867	olfactory receptor 1867	0.017
C8b	complement component 8, beta polypeptide	0.017
Kcnh7	potassium voltage-gated channel, subfamily H (eag-related), member 7	0.017
Avp	arginine vasopressin	0.017
Gabra4	gamma-aminobutyric acid (GABA) A receptor, alpha 4	0.016
Slc14a2	solute carrier family 14 (urea transporter), member 2	0.016
Dlx5	distal-less homeobox 5	0.016
Ghsr	growth hormone secretagogue receptor	0.016
Lrp3	low density lipoprotein receptor-related protein 3	0.016
Atf3	activating transcription factor 3	0.016
Hoxa2	homeo box A2	0.016
Slc28a1	solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	0.016
Onecut1	one cut homeobox 1	0.016
Tacr3	tachykinin receptor 3	0.015
Kcng1	potassium voltage-gated channel, subfamily G, member 1	0.015
Chrm2	cholinergic receptor, muscarinic 2	0.015
Avpr1b	arginine vasopressin receptor 1B	0.015
Fosl1	fos-like antigen 1	0.015
Chrnb4	cholinergic receptor, nicotinic, beta 4	0.015
Mlana	melan-A	0.015
Tnfrsf8	tumor necrosis factor receptor superfamily, member 8	0.015
Prl	prolactin	0.015
Crhr1	corticotropin releasing hormone receptor 1	0.015
Lhb	luteinizing hormone beta	0.015
Grm6	glutamate receptor, metabotropic 6	0.015
Rftn2	raftlin family member 2	0.015
Tmod2	tropomodulin 2	0.015
RY2G5	potential ligand-binding protein	0.015
Cyp2a3	cytochrome P450, family 2, subfamily a, polypeptide 3	0.015
Opn1sw	opsin 1 (cone pigments), short-wave-sensitive	0.015
Cnga3	cyclic nucleotide gated channel alpha 3	0.015
LOC100360165	rCG29588-like	0.015
Tbxa2r	thromboxane A2 receptor	0.015
Isl1	ISL LIM homeobox 1	0.015	Mouse
Clps	colipase, pancreatic	0.014
Grm2	glutamate receptor, metabotropic 2	0.014
Pmfbp1	polyamine modulated factor 1 binding protein 1	0.014
Syt4	synaptotagmin IV	0.014
Scn9a	sodium channel, voltage-gated, type IX, alpha	0.014
Ctrb1	chymotrypsinogen B1	0.014
Syn3	synapsin III	0.014
Vcsa1	variable coding sequence A1	0.014
Gad2	glutamate decarboxylase 2	0.014
Lrrc56	leucine rich repeat containing 56	0.014
Hist1h1d	histone cluster 1, H1d	0.014
Chrna6	cholinergic receptor, nicotinic, alpha 6	0.014
Teddm1	transmembrane epididymal protein 1	0.014
Cbln1	cerebellin 1 precursor	0.014
Elk3	ELK3, ETS-domain protein	0.014
Uncx	UNC homeobox	0.014
Il11	interleukin 11	0.014
Btg2	BTG family, member 2	0.014
Tcam1	testicular cell adhesion molecule 1	0.013
Umod	uromodulin	0.013
Foxa1	forkhead box A1	0.013
Hist1h2ba	histone cluster 1, H2ba	0.013
Lef1	lymphoid enhancer binding factor 1	0.013
Zic1	Zic family member 1 (odd-paired homolog, Drosophila)	0.013
Glud1	glutamate dehydrogenase 1	0.013
Crhbp	corticotropin releasing hormone binding protein	0.013
Elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	0.013
Jund	jun D proto-oncogene	0.013
Fgb	fibrinogen beta chain	0.013
Dll3	delta-like 3 (Drosophila)	0.013	Zebrafish
Pou2f2	POU class 2 homeobox 2	0.013	Rat
Iapp	islet amyloid polypeptide	0.013
Lims1	LIM and senescent cell antigen-like domains 1	0.013
Kcnq3	potassium voltage-gated channel, KQT-like subfamily, member 3	0.013
Cdh8	cadherin 8	0.013
Mapk15	mitogen-activated protein kinase 15	0.013
B4galnt4	beta-1,4-N-acetyl-galactosaminyl transferase 4	0.012
Mamdc4	MAM domain containing 4	0.012
Mak	male germ cell-associated kinase	0.012
Gng13	guanine nucleotide binding protein (G protein), gamma 13	0.012
Shox2	short stature homeobox 2	0.012
Tgfbr2	transforming growth factor, beta receptor II	0.012
Tnni3	troponin I type 3 (cardiac)	0.012
Mip	major intrinsic protein of lens fiber	0.012
Nap1l5	nucleosome assembly protein 1-like 5	0.012
Mpp2	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.012
Cdk2	cyclin dependent kinase 2	0.012
Sstr2	somatostatin receptor 2	0.012
Chrne	cholinergic receptor, nicotinic, epsilon	0.012
Pxdn	peroxidasin homolog (Drosophila)	0.012
Scn4a	sodium channel, voltage-gated, type IV, alpha subunit	0.012
Gpr1	G protein-coupled receptor 1	0.012
Ptprz1	protein tyrosine phosphatase, receptor-type, Z polypeptide 1	0.012
Tnp2	transition protein 2	0.012
Gstt3	glutathione S-transferase, theta 3	0.012
Gdf11	growth differentiation factor 11	0.012
Vdr	vitamin D (1,25- dihydroxyvitamin D3) receptor	0.012
Gata6	GATA binding protein 6	0.012
Cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.012
Htr2c	5-hydroxytryptamine (serotonin) receptor 2C	0.012
Lrit1	leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	0.012
Col9a1	collagen, type IX, alpha 1	0.012
Mmp13	matrix metallopeptidase 13	0.011
St8sia2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	0.011
Crygs	crystallin, gamma S	0.011
Rin1	Ras and Rab interactor 1	0.011
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.011
Adora3	adenosine A3 receptor	0.011
Slc13a2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	0.011
Camkk2	calcium/calmodulin-dependent protein kinase kinase 2, beta	0.011
Ppy	pancreatic polypeptide	0.011
Tnr	tenascin R	0.011
Dchs1	dachsous 1 (Drosophila)	0.011
RGD1308106	LOC361719	0.011
Ager	advanced glycosylation end product-specific receptor	0.011
Sox17	SRY (sex determining region Y)-box 17	0.011
Socs3	suppressor of cytokine signaling 3	0.011
Stat5b	signal transducer and activator of transcription 5B	0.011
Nptxr	neuronal pentraxin receptor	0.011
Msx1	msh homeobox 1	0.011
Grm5	glutamate receptor, metabotropic 5	0.011
P2rx3	purinergic receptor P2X, ligand-gated ion channel, 3	0.011
Grin2c	glutamate receptor, ionotropic, N-methyl D-aspartate 2C	0.011
Hhip	Hedgehog-interacting protein	0.011
Dmrtc1a	DMRT-like family C1a	0.011
Ghrl	ghrelin/obestatin prepropeptide	0.011
Slc16a8	solute carrier family 16, member 8 (monocarboxylic acid transporter 3)	0.011
Btc	betacellulin	0.011
Svs4	seminal vesicle secretory protein 4	0.011
Cnga4	cyclic nucleotide gated channel alpha 4	0.011
Slc8a3	solute carrier family 8 (sodium/calcium exchanger), member 3	0.010
Nfasc	neurofascin	0.010
Dbh	dopamine beta-hydroxylase (dopamine beta-monooxygenase)	0.010
Creb1	cAMP responsive element binding protein 1	0.010	Mouse
Syt7	synaptotagmin VII	0.010
Met	met proto-oncogene	0.010
Adcy8	adenylate cyclase 8 (brain)	0.010
Hand1	heart and neural crest derivatives expressed 1	0.010
Marcks	myristoylated alanine rich protein kinase C substrate	0.010
Lim2	lens intrinsic membrane protein 2	0.010
Crx	cone-rod homeobox	0.010
Cntn2	contactin 2 (axonal)	0.010
Gucy2f	guanylate cyclase 2F	0.010
Dusp5	dual specificity phosphatase 5	0.010
Nr2f2	nuclear receptor subfamily 2, group F, member 2	0.010
Trhr2	thyrotropin releasing hormone receptor 2	0.010
Sst	somatostatin	0.010